Search of human proteins with 8923536

Search of human proteins with 8923536

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923536 host cell factor C1 regulator 1 (XPO1 dependant)
isoform 1 [Homo sapiens]
         (138 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923536 host cell factor C1 regulator 1 (XPO1 dependant) isof...   287   2e-78
gi|50952468 host cell factor C1 regulator 1 (XPO1 dependant) iso...   287   2e-78
gi|50952466 host cell factor C1 regulator 1 (XPO1 dependant) iso...   238   1e-63
gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]            30   0.49 
gi|153946393 macrophage stimulating 1 receptor precursor [Homo s...    30   0.63 
gi|20149646 hypothetical protein LOC54964 [Homo sapiens]               30   0.63 
gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]            30   0.83 
gi|9945318 MAX binding protein [Homo sapiens]                          30   0.83 
gi|89353283 serologically defined colon cancer antigen 3 isoform...    29   1.1  
gi|89353281 serologically defined colon cancer antigen 3 isoform...    29   1.1  
gi|89353278 serologically defined colon cancer antigen 3 isoform...    29   1.1  
gi|31542509 ADP-dependent glucokinase [Homo sapiens]                   29   1.4  
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int...    28   1.8  
gi|190610047 late cornified envelope 6A [Homo sapiens]                 28   1.8  
gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]            28   2.4  
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s...    28   2.4  
gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo sap...    28   2.4  
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s...    28   2.4  
gi|150417975 RhoA/RAC/CDC42 exchange factor isoform 1 [Homo sapi...    28   2.4  
gi|162287076 RhoA/RAC/CDC42 exchange factor isoform 3 [Homo sapi...    28   2.4  
gi|145309320 forkhead box Q1 [Homo sapiens]                            28   3.1  
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ...    28   3.1  
gi|169206277 PREDICTED: hypothetical protein [Homo sapiens]            28   3.1  
gi|169206560 PREDICTED: hypothetical protein [Homo sapiens]            28   3.1  
gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo ...    28   3.1  
gi|169205714 PREDICTED: hypothetical protein [Homo sapiens]            28   3.1  
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]      28   3.1  
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]      28   3.1  
gi|110431370 espin [Homo sapiens]                                      28   3.1  
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    27   4.1  

>gi|8923536 host cell factor C1 regulator 1 (XPO1 dependant) isoform
           1 [Homo sapiens]
          Length = 138

 Score =  287 bits (734), Expect = 2e-78
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS 60
           MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS
Sbjct: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS 60

Query: 61  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 120
           EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG
Sbjct: 61  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 120

Query: 121 DTPSPPYPATPAGDIMEL 138
           DTPSPPYPATPAGDIMEL
Sbjct: 121 DTPSPPYPATPAGDIMEL 138


>gi|50952468 host cell factor C1 regulator 1 (XPO1 dependant)
           isoform 1 [Homo sapiens]
          Length = 138

 Score =  287 bits (734), Expect = 2e-78
 Identities = 138/138 (100%), Positives = 138/138 (100%)

Query: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS 60
           MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS
Sbjct: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS 60

Query: 61  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 120
           EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG
Sbjct: 61  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 120

Query: 121 DTPSPPYPATPAGDIMEL 138
           DTPSPPYPATPAGDIMEL
Sbjct: 121 DTPSPPYPATPAGDIMEL 138


>gi|50952466 host cell factor C1 regulator 1 (XPO1 dependant)
           isoform 2 [Homo sapiens]
          Length = 119

 Score =  238 bits (607), Expect = 1e-63
 Identities = 118/138 (85%), Positives = 119/138 (86%), Gaps = 19/138 (13%)

Query: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLS 60
           MILQQPLQRGPQGGAQRLPRAALGVTWGLDA                   +EPLRKQFLS
Sbjct: 1   MILQQPLQRGPQGGAQRLPRAALGVTWGLDA-------------------REPLRKQFLS 41

Query: 61  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 120
           EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG
Sbjct: 42  EENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLG 101

Query: 121 DTPSPPYPATPAGDIMEL 138
           DTPSPPYPATPAGDIMEL
Sbjct: 102 DTPSPPYPATPAGDIMEL 119


>gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 15/88 (17%)

Query: 60  SEENMATHFSQLSLHNDH-PYCSPPMTFSPALPPLRSPCSEL-----------LLWRYPG 107
           S   + T  SQ  LH  H P+C PP   S       +P S L           L   +PG
Sbjct: 86  SASTVPTSASQQILHAQHLPHCGPPKPSSQPFSSFYTPSSRLPVASSGPWGSFLTTAFPG 145

Query: 108 SLIP--EALRLLRLGDTPSPPYPATPAG 133
            + P    LR   L  + SP  P  P+G
Sbjct: 146 PVFPFRRPLRAQNLLKSASPD-PLAPSG 172


>gi|153946393 macrophage stimulating 1 receptor precursor [Homo
           sapiens]
          Length = 1400

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 72  SLHNDHPYCSPPMT-FSPALPPLRSPCSELL----LWRYPGSLIPEALRLLRLGDTPSPP 126
           S   DH  C P +T F P   PLR      L     + +P  L+PE    + +G +P  P
Sbjct: 561 SWQQDH--CPPKLTEFHPHSGPLRGSTRLTLCGSNFYLHPSGLVPEGTHQVTVGQSPCRP 618

Query: 127 YP 128
            P
Sbjct: 619 LP 620


>gi|20149646 hypothetical protein LOC54964 [Homo sapiens]
          Length = 341

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 46  RLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWR 104
           RL EE  PL     ++ N A+  +  +     P+ +  +  SP+LPP  SPC  L  W+
Sbjct: 257 RLREEC-PLDTSLCTDTNCASQSTTSTRTTTTPFPTIHLRSSPSLPP-ASPCPALAFWK 313


>gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 15/88 (17%)

Query: 60  SEENMATHFSQLSLHNDH-PYCSPPMTFSPALPPLRSPCSEL-----------LLWRYPG 107
           S   + T  SQ  LH  H P+C PP   S       +P S L           L   +PG
Sbjct: 86  SASAVPTSASQQILHAQHLPHCGPPKPSSQPFSSFYTPSSRLPVASSGPWGSFLTTAFPG 145

Query: 108 SLIP--EALRLLRLGDTPSPPYPATPAG 133
            + P    LR   L  + SP  P  P+G
Sbjct: 146 PVFPFRRPLRAQNLLKSASPD-PLAPSG 172


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)

Query: 44  KRRLEEEQEPLR--KQFLSEENMATHFSQLS--LHNDHPYC-SPPMTFSPALPPLRSPCS 98
           ++R  EEQE LR  ++   E+  A   ++L+  L  + P   +PP+  SP  PP   P  
Sbjct: 20  QQRAREEQERLRLEQEREQEQKKANSLARLAHTLPVEEPRMEAPPLPLSPPAPPPAPP-- 77

Query: 99  ELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPA 132
             L    P ++IP  + ++     P PP P  PA
Sbjct: 78  PPLATPAPLTVIP--IPVVTNSPQPLPPPPPLPA 109


>gi|89353283 serologically defined colon cancer antigen 3 isoform 3
           [Homo sapiens]
          Length = 362

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 85  TFSPALPPLRSPCSELL-LWRYPGSLI-PEALRLLRLGDTPSPPYPATPAG 133
           T    +P   SPCS  L  +  P  L  PE+L    L DT S   PA+PAG
Sbjct: 123 THPERVPAGTSPCSTYLSFFSTPSELAGPESLPSWALSDTDSRVSPASPAG 173


>gi|89353281 serologically defined colon cancer antigen 3 isoform 1
           [Homo sapiens]
          Length = 435

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 85  TFSPALPPLRSPCSELL-LWRYPGSLI-PEALRLLRLGDTPSPPYPATPAG 133
           T    +P   SPCS  L  +  P  L  PE+L    L DT S   PA+PAG
Sbjct: 196 THPERVPAGTSPCSTYLSFFSTPSELAGPESLPSWALSDTDSRVSPASPAG 246


>gi|89353278 serologically defined colon cancer antigen 3 isoform 2
           [Homo sapiens]
          Length = 412

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 85  TFSPALPPLRSPCSELL-LWRYPGSLI-PEALRLLRLGDTPSPPYPATPAG 133
           T    +P   SPCS  L  +  P  L  PE+L    L DT S   PA+PAG
Sbjct: 173 THPERVPAGTSPCSTYLSFFSTPSELAGPESLPSWALSDTDSRVSPASPAG 223


>gi|31542509 ADP-dependent glucokinase [Homo sapiens]
          Length = 496

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 97  CSELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPAG 133
           C  LL    PGS +      L LG  P+PP P +P G
Sbjct: 19  CVFLLEPELPGSALRSLWSSLCLGPAPAPPGPVSPEG 55


>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
           interacting protein [Homo sapiens]
          Length = 1211

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 60  SEENMATHFSQLSLHNDHPYCS----PPMTFSPALPPLRSPCSELLLWRYPGSLIPEALR 115
           SEE  +  +S +S H   P  S    PP+ F  A P  RS        R P   + + L 
Sbjct: 734 SEEGSSLTYSSISDHIPPPPLSPPPPPPLPFHDAKPSSRSSDGS----RGPAQALAKPLT 789

Query: 116 LLRLGDTPSPPYPATP 131
            L     P PP P  P
Sbjct: 790 QLSHPVPPPPPPPLPP 805


>gi|190610047 late cornified envelope 6A [Homo sapiens]
          Length = 80

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 78 PYCSPPMTFSPALPPLRSPC 97
          P CSPP   +P L P  +PC
Sbjct: 15 PKCSPPQRSNPCLAPYSTPC 34


>gi|239744254 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 385

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 15/87 (17%)

Query: 60  SEENMATHFSQLSLHNDH-PYCSPPMTFSPALPPLRSPCSEL-----------LLWRYPG 107
           S   + T  SQ  LH  H P+C PP   S       +P S L           L   +PG
Sbjct: 86  SASTVPTSASQQILHAQHLPHCGPPKPSSQPFSSFYTPSSRLPVASSGPWGSFLTTAFPG 145

Query: 108 SLIP--EALRLLRLGDTPSPPYPATPA 132
            + P    LR   L  + SP  P  P+
Sbjct: 146 PVFPFRRPLRAQNLLKSASPD-PLAPS 171


>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
           sapiens]
          Length = 1074

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 10/46 (21%)

Query: 88  PALPPLRSPCSELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPAG 133
           P L P   P       R PG+L     R +R+   P+PP+P TP G
Sbjct: 627 PPLAPAPRPA------RTPGTL----QRQVRIPQMPAPPHPRTPLG 662


>gi|5802982 proline-rich nuclear receptor coactivator 1 [Homo
           sapiens]
          Length = 327

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 10  GPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMATHFS 69
           GP       P AA G        +PLR A P  T  R    +E L+ +    E +A    
Sbjct: 142 GPAAALAPSPAAAAGTEGASPDLAPLRPAAPGQTPLR----KEVLKSKMGKSEKIALPHG 197

Query: 70  QLSLHNDHPYCSP 82
           QL +H  H Y  P
Sbjct: 198 QL-VHGIHLYEQP 209


>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
           sapiens]
          Length = 877

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 10/46 (21%)

Query: 88  PALPPLRSPCSELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPAG 133
           P L P   P       R PG+L     R +R+   P+PP+P TP G
Sbjct: 627 PPLAPAPRPA------RTPGTL----QRQVRIPQMPAPPHPRTPLG 662


>gi|150417975 RhoA/RAC/CDC42 exchange factor isoform 1 [Homo
           sapiens]
          Length = 580

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 17/95 (17%)

Query: 9   RGPQGGAQRLPRAALGVTWGLDASSPLRGAVP---MSTKRRLEEEQEPLRKQFLSEENMA 65
           RGP  G+    R  LG        +P+ G++P   +S K  +     PL KQ L +   A
Sbjct: 495 RGPGVGSPG--RIRLGDQAQGSTHTPINGSLPSLLLSPKGEVARALLPLDKQALGDIPQA 552

Query: 66  THFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSEL 100
                       P+ SPP++ +P  PP ++  ++L
Sbjct: 553 ------------PHDSPPVSPTPKTPPCQARLAKL 575


>gi|162287076 RhoA/RAC/CDC42 exchange factor isoform 3 [Homo
           sapiens]
          Length = 619

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 17/95 (17%)

Query: 9   RGPQGGAQRLPRAALGVTWGLDASSPLRGAVP---MSTKRRLEEEQEPLRKQFLSEENMA 65
           RGP  G+    R  LG        +P+ G++P   +S K  +     PL KQ L +   A
Sbjct: 534 RGPGVGSPG--RIRLGDQAQGSTHTPINGSLPSLLLSPKGEVARALLPLDKQALGDIPQA 591

Query: 66  THFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSEL 100
                       P+ SPP++ +P  PP ++  ++L
Sbjct: 592 ------------PHDSPPVSPTPKTPPCQARLAKL 614


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 20/75 (26%)

Query: 78  PYCSPPMTFSPALPPLRSPCSELLLWRYPG---------SLIPEALRLLRLGDT------ 122
           P   PP   +PA P +RSP  +       G         S++ +  R  RL DT      
Sbjct: 236 PAAPPPAPAAPASPRMRSPARQEERASPAGKFSSSFAIDSILRKPFRSRRLRDTAPGTTL 295

Query: 123 -----PSPPYPATPA 132
                P PP PA PA
Sbjct: 296 QWGAAPCPPLPAFPA 310


>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
            sapiens]
          Length = 3258

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)

Query: 82   PPMTFSPALPPLRSPCSELLLWRYPGSLIPEALRLLRLGDTPSPPYPATPA 132
            P ++F P L  L + C  L++     S + + L LL L    SPP P + A
Sbjct: 2626 PIISFLPHLRSLINVCVNLVMGVVGPSSVADGLPLLHLSPYLSPPLPFSTA 2676


>gi|169206277 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 9/56 (16%)

Query: 78  PYCSPPMTFSPALPPLRSPCSEL--LLWRYPGSLIPEALRLLRLGDTPSPPYPATP 131
           PY  PP      L   RSP  E    + R+P    PEA++L      P PP PA+P
Sbjct: 88  PYLFPPCAMDTVLGG-RSPHLERPPTVCRHPVGRRPEAIQL------PGPPSPASP 136


>gi|169206560 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 9/56 (16%)

Query: 78  PYCSPPMTFSPALPPLRSPCSEL--LLWRYPGSLIPEALRLLRLGDTPSPPYPATP 131
           PY  PP      L   RSP  E    + R+P    PEA++L      P PP PA+P
Sbjct: 88  PYLFPPCVMDTVLGG-RSPHLERPPTVCRHPVGRRPEAIQL------PGPPSPASP 136


>gi|239747276 PREDICTED: hypothetical protein XP_002346410 [Homo
           sapiens]
          Length = 169

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 81  SPPMTFSPALPPLRSPCS 98
           +PP    P LPPL SPC+
Sbjct: 122 APPAPLQPPLPPLLSPCT 139


>gi|169205714 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 148

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 9/56 (16%)

Query: 78  PYCSPPMTFSPALPPLRSPCSEL--LLWRYPGSLIPEALRLLRLGDTPSPPYPATP 131
           PY  PP      L   RSP  E    + R+P    PEA++L      P PP PA+P
Sbjct: 88  PYLFPPCVMDTVLGG-RSPHLERPPTVCRHPVGRRPEAIQL------PGPPSPASP 136


>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
          Length = 4022

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 8/47 (17%)

Query: 97   CSELLLWRYPGSLIPEALRLLRLGDTP-----SPPYPATPAGDIMEL 138
            C  ++LWRYP    P  L L+R+   P      P       GD++++
Sbjct: 2333 CPGMMLWRYPE---PRVLTLVRITPVPFNTTEDPDISTADLGDVLQV 2376


>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
          Length = 3997

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 8/47 (17%)

Query: 97   CSELLLWRYPGSLIPEALRLLRLGDTP-----SPPYPATPAGDIMEL 138
            C  ++LWRYP    P  L L+R+   P      P       GD++++
Sbjct: 2308 CPGMMLWRYPE---PRVLTLVRITPVPFNTTEDPDISTADLGDVLQV 2351


>gi|110431370 espin [Homo sapiens]
          Length = 854

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 7/108 (6%)

Query: 6   PLQRGPQGGAQRLPRAALGVTWGLDASSPLRGAVPMSTKRRLEEEQEPLRKQFLSEENMA 65
           PL+    G  QR   ++ G T   +  SP      +  + +  +  +P  +     + + 
Sbjct: 620 PLESAGPGCGQRRSSSSTGSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQS----KGLT 675

Query: 66  THFSQLSLHNDHPYCSPPMTFSPALPPLRSPCSELLLWR--YPGSLIP 111
           T FS +      P  SP  + SPAL P+RSP      ++    GSL+P
Sbjct: 676 TVFSGIGQPAFQPD-SPLPSVSPALSPVRSPTPPAAGFQPLLNGSLVP 722


>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
            [Homo sapiens]
          Length = 1365

 Score = 27.3 bits (59), Expect = 4.1
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 24   GVTWGLDASSPLR-GAVPMSTKRRLEEEQEPLRKQFLSEENMATHFSQLSLHNDHPY-CS 81
            G  WGL A   +R G         L +E+E + +   + EN  THF  L++  D      
Sbjct: 1072 GKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAG 1131

Query: 82   PPMTFSPALPPLRSPCSELLLWRYPG 107
            P   +S  +     P  E L W   G
Sbjct: 1132 PKGNYSRFMNHSCQPNCETLKWTVNG 1157


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,102,409
Number of Sequences: 37866
Number of extensions: 363967
Number of successful extensions: 1629
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1590
Number of HSP's gapped (non-prelim): 97
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.