LLPH 3781

Name: LLPH	Sequence: fasta or formatted (129aa)		NCBI GI: 14150124
Description: LLP homolog		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 10 1 C cysteine 1.6 2 1 D aspartate 6.2 8 2 E glutamate 6.2 8 1 F phenylalanine 0.0 0 0 G glycine 3.1 4 1 H histidine 1.6 2 1 I isoleucine 3.1 4 1 K lysine 23.3 30 2 L leucine 7.0 9 2 M methionine 5.4 7 1 N asparagine 2.3 3 1 P proline 3.1 4 1 Q glutamine 5.4 7 1 R arginine 8.5 11 1 S serine 3.9 5 1 T threonine 2.3 3 1 V valine 6.2 8 3 W tryptophan 2.3 3 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LLP homolog LOC646644 0.945 PREDICTED: similar to LLP homolog LOC646644 0.945 PREDICTED: similar to LLP homolog LOC646644 0.945 PREDICTED: similar to LLP homolog LOC100133599 0.047 PREDICTED: hypothetical protein AP3D1 0.042 adaptor-related protein complex 3, delta 1 subunit ... EIF5B 0.038 eukaryotic translation initiation factor 5B TAF3 0.038 RNA polymerase II transcription factor TAFII140 [Ho... C2orf49 0.038 ashwin CCDC102B 0.034 coiled-coil domain containing 102B CCDC102B 0.034 coiled-coil domain containing 102B RBBP6 0.030 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.030 retinoblastoma-binding protein 6 isoform 1 SMC3 0.025 structural maintenance of chromosomes 3 CCDC80 0.025 steroid-sensitive protein 1 CCDC80 0.025 steroid-sensitive protein 1 SON 0.025 SON DNA-binding protein isoform F SON 0.025 SON DNA-binding protein isoform B ARL6IP4 0.025 SRp25 nuclear protein isoform 3 LRRC45 0.025 leucine rich repeat containing 45 LOC100133599 0.025 PREDICTED: hypothetical protein GOLGA3 0.025 Golgi autoantigen, golgin subfamily a, 3 RBM25 0.021 RNA binding motif protein 25 KIAA1217 0.021 sickle tail isoform 2 KIAA1217 0.021 sickle tail isoform 1 EXOC4 0.021 SEC8 protein isoform a CHD2 0.021 chromodomain helicase DNA binding protein 2 isoform... UACA 0.021 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.021 uveal autoantigen with coiled-coil domains and ankyr... TRIM41 0.021 tripartite motif-containing 41 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.