Search of human proteins with 14150070

Search of human proteins with 14150070

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14150070 coiled-coil-helix-coiled-coil-helix domain
containing 5 [Homo sapiens]
         (110 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14150070 coiled-coil-helix-coiled-coil-helix domain containin...   232   6e-62
gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens]               31   0.24 
gi|42558252 coiled-coil-helix-coiled-coil-helix domain containin...    28   1.2  
gi|73476319 hypothetical protein LOC352909 [Homo sapiens]              28   1.6  
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    27   3.5  
gi|93141033 PAX interacting protein 1 [Homo sapiens]                   27   3.5  
gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Hom...    27   3.5  
gi|110349719 titin isoform N2-A [Homo sapiens]                         27   4.6  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      27   4.6  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      27   4.6  
gi|110349715 titin isoform N2-B [Homo sapiens]                         27   4.6  
gi|239752750 PREDICTED: similar to protein phosphatase 2, cataly...    27   4.6  
gi|239747318 PREDICTED: similar to protein phosphatase 2, cataly...    27   4.6  
gi|239741140 PREDICTED: similar to protein phosphatase 2, cataly...    27   4.6  
gi|7657369 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8...    27   4.6  
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ...    26   6.0  
gi|17986001 major histocompatibility complex, class I, B precurs...    26   7.8  
gi|119226260 calcium homeostasis endoplasmic reticulum protein [...    26   7.8  
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]          26   7.8  
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          26   7.8  
gi|147900223 hypothetical protein LOC284184 [Homo sapiens]             26   7.8  

>gi|14150070 coiled-coil-helix-coiled-coil-helix domain containing 5
           [Homo sapiens]
          Length = 110

 Score =  232 bits (591), Expect = 6e-62
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MQAALEVTARYCGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQ 60
           MQAALEVTARYCGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQ
Sbjct: 1   MQAALEVTARYCGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQ 60

Query: 61  PFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQPLPAS 110
           PFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQPLPAS
Sbjct: 61  PFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQPLPAS 110


>gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens]
          Length = 663

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)

Query: 14  RELEQYGQCVAAK---PESWQRD---CHYLKMSIAQCTSSHPIIRQ 53
           RE+ + G C A     P S+Q     CH+L M +  CT+ H  I Q
Sbjct: 500 REITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQ 545


>gi|42558252 coiled-coil-helix-coiled-coil-helix domain containing 1
           [Homo sapiens]
          Length = 118

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query: 58  CAQPFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVE 103
           C         C +QNE     C + ++ FL CA + Q  R   +++
Sbjct: 45  CITEMSVMMACWKQNEFRDDACRKEIQGFLDCAARAQEARKMRSIQ 90


>gi|73476319 hypothetical protein LOC352909 [Homo sapiens]
          Length = 588

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 10/55 (18%)

Query: 56  QACAQPFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQPLPAS 110
           Q  A+P E F    +  E+A+GN              V+P   P  + AQPL AS
Sbjct: 489 QTGARPSETFARFCKSQESALGN----------TVPAVEPGTPPLDILAQPLEAS 533


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 15  ELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEA 74
           E E+Y +    + E  Q++      S+ Q       +RQ RQ   +  EA +  LRQ   
Sbjct: 479 EQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLEEVRQNRQRADEDVEAAQRKLRQAST 538

Query: 75  AVGNCAEHMRRFLQCAE 91
            V +    M R +   E
Sbjct: 539 NVKHWNVQMNRLMHPIE 555


>gi|93141033 PAX interacting protein 1 [Homo sapiens]
          Length = 1069

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 14  RELEQYGQCVAAKPESWQRDCHYLKMS-IAQCTSSHPIIRQIRQACAQPFEAFEECLRQN 72
           ++L+ + Q  A + +  Q   H L+   +AQ    H +++Q +Q   Q  +      +Q 
Sbjct: 486 QQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQQQQ 545

Query: 73  EAAV-GNCAEHMRRFLQCAEQVQPPRSPATVEAQPLP 108
           +  +    A H+ +  Q  +   PP+ P   + Q  P
Sbjct: 546 QQQMQSQTAPHLSQTSQALQHQVPPQQPPQQQQQQQP 582


>gi|154813199 poly (ADP-ribose) polymerase family, member 14 [Homo
            sapiens]
          Length = 1801

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 2    QAALEVTARYCGRELEQYGQCVAA------KPESWQRDCHYLKMSIAQ-----CTSSHPI 50
            ++ LE        EL+  GQ VA       K  SW  DC Y+   +A       TSS  I
Sbjct: 1048 KSLLEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKI 1107

Query: 51   IRQIRQACAQPFEA 64
            +  I + C +  E+
Sbjct: 1108 MEDIIRECMEITES 1121


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 69    LRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVE 103
             + +N A VG  A  + R ++C E V PP  P  V+
Sbjct: 28228 MAENAAGVGP-ASGISRLIKCREPVNPPGPPTVVK 28261


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 69    LRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVE 103
             + +N A VG  A  + R ++C E V PP  P  V+
Sbjct: 21923 MAENAAGVGP-ASGISRLIKCREPVNPPGPPTVVK 21956


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 69    LRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVE 103
             + +N A VG  A  + R ++C E V PP  P  V+
Sbjct: 21856 MAENAAGVGP-ASGISRLIKCREPVNPPGPPTVVK 21889


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 69    LRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVE 103
             + +N A VG  A  + R ++C E V PP  P  V+
Sbjct: 21731 MAENAAGVGP-ASGISRLIKCREPVNPPGPPTVVK 21764


>gi|239752750 PREDICTED: similar to protein phosphatase 2, catalytic
           subunit, alpha [Homo sapiens]
          Length = 384

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 37  LKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEAAVGN 78
           +K+S  +C +  P   + RQ   Q + ++EECLR++  A G+
Sbjct: 230 VKVSYHECVTILPRNHESRQI-TQVYHSYEECLRKHGNANGD 270


>gi|239747318 PREDICTED: similar to protein phosphatase 2, catalytic
           subunit, alpha [Homo sapiens]
          Length = 254

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 37  LKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEAAVGN 78
           +K+S  +C +  P   + RQ   Q + ++EECLR++  A G+
Sbjct: 109 VKVSYHECVTILPRNHESRQI-TQVYHSYEECLRKHGNANGD 149


>gi|239741140 PREDICTED: similar to protein phosphatase 2, catalytic
           subunit, alpha [Homo sapiens]
          Length = 254

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 37  LKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEAAVGN 78
           +K+S  +C +  P   + RQ   Q + ++EECLR++  A G+
Sbjct: 109 VKVSYHECVTILPRNHESRQI-TQVYHSYEECLRKHGNANGD 149


>gi|7657369 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8,
           19kDa [Homo sapiens]
          Length = 172

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 52  RQIRQACAQPFEAFEECL-RQNEAAVGNCAEHMRRFLQC 89
           RQI++ CA+PF  +  C+    +    +C +   +F +C
Sbjct: 72  RQIKRHCAEPFTEYWTCIDYTGQQLFRHCRKQQAKFDEC 110


>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
           sapiens]
          Length = 262

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 16/56 (28%), Positives = 24/56 (42%)

Query: 55  RQACAQPFEAFEECLRQNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQPLPAS 110
           R A A+    +   L++     G C    RR L    +++ PR PA    +  PAS
Sbjct: 99  RPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRLRSPRDPAWESGRRRPAS 154


>gi|17986001 major histocompatibility complex, class I, B precursor
           [Homo sapiens]
          Length = 362

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 56  QACAQPFEAFEECLRQNEAAVGNCAEHMRRFLQCA----EQVQPPRSPAT 101
           Q   + +EA  E  ++     G C E +RR+L+      E+  PP++  T
Sbjct: 165 QITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVT 214


>gi|119226260 calcium homeostasis endoplasmic reticulum protein
           [Homo sapiens]
          Length = 916

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 3   AALE--VTARYCGREL---EQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIR-- 55
           AAL+  V   YC   L   E   Q +A   + W+++ ++    I Q  S    + Q +  
Sbjct: 235 AALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQAT 294

Query: 56  -----QACAQPFE-AFEECLR----QNEAAVGNCAEHMRRFLQCAEQVQPPRSPATVEAQ 105
                 +  QP + AF++ ++    Q+E  V + A+  ++  Q  +Q+Q P+  A V+A 
Sbjct: 295 LINEYSSVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKAT 354

Query: 106 PLP 108
           P P
Sbjct: 355 PPP 357


>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
          Length = 1044

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 24   AAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEAAVGNCAEHM 83
            A++ E+ Q       +   Q      + R+++ A A+  EA      Q+EAAV   A+H+
Sbjct: 971  ASEEETRQAKAELATLQARQQLELEEVHRRVKTALARKEEAVSSLRTQHEAAVKR-ADHL 1029

Query: 84   RRFLQ 88
               L+
Sbjct: 1030 EELLE 1034


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 24   AAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEAAVGNCAEHM 83
            A++ E+ Q       +   Q      + R+++ A A+  EA      Q+EAAV   A+H+
Sbjct: 1007 ASEEETRQAKAELATLQARQQLELEEVHRRVKTALARKEEAVSSLRTQHEAAVKR-ADHL 1065

Query: 84   RRFLQ 88
               L+
Sbjct: 1066 EELLE 1070


>gi|147900223 hypothetical protein LOC284184 [Homo sapiens]
          Length = 74

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 20/57 (35%)

Query: 12 CGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEEC 68
          CG E   YG+CV A                    S+ P  R  +  CA+ FEA   C
Sbjct: 25 CGAEAAAYGRCVQA--------------------STAPGGRLSKDFCAREFEALRSC 61


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.129    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,776,422
Number of Sequences: 37866
Number of extensions: 192495
Number of successful extensions: 493
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 485
Number of HSP's gapped (non-prelim): 23
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.