Search of human proteins with 8922952

Search of human proteins with 8922952

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922952 cappuccino [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922952 cappuccino [Homo sapiens]                                  435   e-122
gi|60498980 breast carcinoma amplified sequence 4 isoform b [Hom...   120   9e-28
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom...    97   8e-21
gi|58294158 breast carcinoma amplified sequence 4 isoform c [Hom...    65   3e-11
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                36   0.022
gi|22219477 tigger transposable element derived 4 [Homo sapiens]       35   0.064
gi|171906567 peripheral benzodiazepine receptor-associated prote...    33   0.19 
gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens]                  32   0.54 
gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]                  32   0.54 
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]       31   0.71 
gi|171906559 peripheral benzodiazepine receptor-associated prote...    31   0.71 
gi|122937219 F-box protein 41 [Homo sapiens]                           31   0.71 
gi|226495417 coiled-coil domain containing 102A [Homo sapiens]         31   0.92 
gi|221316695 multimerin 2 precursor [Homo sapiens]                     31   0.92 
gi|5902106 SRY-box 15 [Homo sapiens]                                   31   0.92 
gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]                 30   1.2  
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol...    30   1.6  
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol...    30   1.6  
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]     30   1.6  
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]       30   1.6  
gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo sap...    30   2.1  
gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo sap...    30   2.1  
gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo sap...    30   2.1  
gi|24307909 ral guanine nucleotide dissociation stimulator isofo...    30   2.1  
gi|108796058 ral guanine nucleotide dissociation stimulator isof...    30   2.1  
gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]         30   2.1  
gi|60097902 filaggrin [Homo sapiens]                                   29   2.7  
gi|38176300 nestin [Homo sapiens]                                      29   2.7  
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ...    29   2.7  
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ...    29   2.7  

>gi|8922952 cappuccino [Homo sapiens]
          Length = 217

 Score =  435 bits (1118), Expect = e-122
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MEGSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPL 60
           MEGSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPL
Sbjct: 1   MEGSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPL 60

Query: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120
           LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR
Sbjct: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120

Query: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180
           IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP
Sbjct: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180

Query: 181 SLFSKSAPSRPQQAGYEAPVLFRTEDYFPCCSERPQL 217
           SLFSKSAPSRPQQAGYEAPVLFRTEDYFPCCSERPQL
Sbjct: 181 SLFSKSAPSRPQQAGYEAPVLFRTEDYFPCCSERPQL 217


>gi|60498980 breast carcinoma amplified sequence 4 isoform b [Homo
           sapiens]
          Length = 203

 Score =  120 bits (301), Expect = 9e-28
 Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 4/149 (2%)

Query: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120
           +R  A   A  L P  GA  E + ++ ++E +L R++EF  + D++R D+S ++ E +P 
Sbjct: 42  MRSGARELALFLTPEPGA--EAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPV 99

Query: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180
           + AK  EMR IY+++DRLEAFV+MVG  VA +E  V +AE + G FP+A ++ L +  +P
Sbjct: 100 LKAKLTEMRGIYAKVDRLEAFVKMVGHHVAFLEADVLQAERDHGAFPQALRRWLGSAGLP 159

Query: 181 SLFSKSAPSRPQQAGYEAPVLFRTEDYFP 209
           S  +KS    P    YE P L+RTEDYFP
Sbjct: 160 SFRNKS--PAPVPVTYELPTLYRTEDYFP 186


>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
           sapiens]
          Length = 211

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 49/121 (40%), Positives = 78/121 (64%), Gaps = 2/121 (1%)

Query: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120
           +R  A   A  L P  GA  E + ++ ++E +L R++EF  + D++R D+S ++ E +P 
Sbjct: 42  MRSGARELALFLTPEPGA--EAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPV 99

Query: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180
           + AK  EMR IY+++DRLEAFV+MVG  VA +E  V +AE + G FP+A ++ L +  +P
Sbjct: 100 LKAKLTEMRGIYAKVDRLEAFVKMVGHHVAFLEADVLQAERDHGAFPQALRRWLGSAGLP 159

Query: 181 S 181
           S
Sbjct: 160 S 160


>gi|58294158 breast carcinoma amplified sequence 4 isoform c [Homo
           sapiens]
          Length = 158

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 49/149 (32%)

Query: 61  LRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPR 120
           +R  A   A  L P  GA  E + ++ ++E +L R++EF  + D++R D+S ++ E +P 
Sbjct: 42  MRSGARELALFLTPEPGA--EAKEVEETIEGMLLRLEEFCSLADLIRSDTSQILEENIPV 99

Query: 121 IHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLLHTMNVP 180
           + AK  EMR IY+++DRLE                                         
Sbjct: 100 LKAKLTEMRGIYAKVDRLE----------------------------------------- 118

Query: 181 SLFSKSAPSRPQQAGYEAPVLFRTEDYFP 209
                 +P+ P    YE P L+RTEDYFP
Sbjct: 119 -----KSPA-PVPVTYELPTLYRTEDYFP 141


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 62   RRAAAGYAACLLPGAGA----RPEVEALDASLED----LLTRVDEFVGMLDMLRGDSSHV 113
            RR   G    LL G  +    R E++     L++      TR    +G L+  RG     
Sbjct: 1321 RRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQ 1380

Query: 114  V--SEGVP-RIHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAF 170
            +  + G+  ++ A  AE   +  R+   E   + +   +AR+E Q   AEA+LG    A 
Sbjct: 1381 LDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSAL 1440

Query: 171  KKLLHTMNVPSLFSKSAPSRP 191
            ++ L     PS   +  P  P
Sbjct: 1441 RRGLGLGRAPSPAPRPVPGSP 1461


>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
          Length = 512

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)

Query: 8   GGALPEGLA--------EEAEPQGAAWSGDSGTVSQSHSSASGPW-EDEGAEDGAPGRDL 58
           G   PEGL+        ++ E   AA +GDS    +S S  +G +  DE  +DG+PG +L
Sbjct: 408 GVEFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTEL 467

Query: 59  PLLRRAAA 66
           PL  ++ A
Sbjct: 468 PLPSKSEA 475


>gi|171906567 peripheral benzodiazepine receptor-associated protein
           1 isoform b [Homo sapiens]
          Length = 1797

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 41/158 (25%), Positives = 57/158 (36%), Gaps = 11/158 (6%)

Query: 17  EEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGA 76
           E ++P+G   S   G      + A  P   + A    P    P      A   A L    
Sbjct: 59  ESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSF 118

Query: 77  GARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIYSRID 136
           G RP +E L A L +L  R         MLR  S     E V R+  K AE+  I  R++
Sbjct: 119 GDRPNLELLRA-LGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLE 177

Query: 137 RLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKKLL 174
                      R  +++E   + E       R F +LL
Sbjct: 178 E----------RARKLQETNLRVEGPQWLHVRDFDRLL 205


>gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens]
          Length = 818

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 12  PEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLP 59
           PEG  EEAEP   + + D   VS S+ S      DE  EDG+ G+  P
Sbjct: 120 PEGYYEEAEPYDTSLNEDGEAVSSSYES-----YDE--EDGSKGKSAP 160



 Score = 27.7 bits (60), Expect = 7.8
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 88  SLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIY---SRIDRLEAFVRM 144
           +LE LLT +D+F+ +LD     S+ +V +         AE+ R+Y   S  D    ++  
Sbjct: 6   ALEQLLTELDDFLKILDQENLSSTALVKKSC------LAELLRLYTKSSSSDEEYIYMNK 59

Query: 145 VGGRVARMEEQVTKAEAELGTFP 167
           V     +  E   KA  E G  P
Sbjct: 60  VTINKQQNAESQGKAPEEQGLLP 82


>gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]
          Length = 814

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 12  PEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLP 59
           PEG  EEAEP   + + D   VS S+ S      DE  EDG+ G+  P
Sbjct: 120 PEGYYEEAEPYDTSLNEDGEAVSSSYES-----YDE--EDGSKGKSAP 160



 Score = 27.7 bits (60), Expect = 7.8
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 88  SLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIY---SRIDRLEAFVRM 144
           +LE LLT +D+F+ +LD     S+ +V +         AE+ R+Y   S  D    ++  
Sbjct: 6   ALEQLLTELDDFLKILDQENLSSTALVKKSC------LAELLRLYTKSSSSDEEYIYMNK 59

Query: 145 VGGRVARMEEQVTKAEAELGTFP 167
           V     +  E   KA  E G  P
Sbjct: 60  VTINKQQNAESQGKAPEEQGLLP 82


>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
          Length = 1374

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 62/230 (26%), Positives = 81/230 (35%), Gaps = 44/230 (19%)

Query: 1    MEGSFSDGGALPEGLAEEA-EPQGAAW--SGDSGTVSQSHSSASGPWEDEGAED------ 51
            +EGS  +    P GL  E  EPQG A    G S + SQ       P   EG         
Sbjct: 1062 LEGSSPEPSTCPSGLVPEPPEPQGPAKVRPGPSPSCSQFFLLTPVPLRSEGNSSEFQGPP 1121

Query: 52   ------------GAPGRDLPLLRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEF 99
                        G PG     LR A  G  A L      RPE E  D+   D     DE 
Sbjct: 1122 GLLSGPAPQKRMGGPGTPRAPLRLALPGLPAAL----EGRPEEEEEDSEDSD---ESDEE 1174

Query: 100  VGMLDMLR-GDSSHVVSEGVPRIHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVT- 157
            +    +    + S   +  VP + A++   R + S +             + R ++ V+ 
Sbjct: 1175 LRCYSVQEPSEDSEEEAPAVPVVVAESQSARNLRSLLKMPSLLSETFCEDLERKKKAVSF 1234

Query: 158  ------------KAEAELGT-FPRAFKKLLHTMNVPSLFSKSAPSRPQQA 194
                            ELG  FP A K+   T    S  S SAP+RPQQA
Sbjct: 1235 FDDVTVYLFDQESPTRELGEPFPGA-KESPPTFLRGSPGSPSAPNRPQQA 1283


>gi|171906559 peripheral benzodiazepine receptor-associated protein
           1 isoform a [Homo sapiens]
          Length = 1857

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 1/120 (0%)

Query: 17  EEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGA 76
           E ++P+G   S   G      + A  P   + A    P    P      A   A L    
Sbjct: 59  ESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSF 118

Query: 77  GARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIYSRID 136
           G RP +E L A L +L  R         MLR  S     E V R+  K AE+  I  R++
Sbjct: 119 GDRPNLELLRA-LGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLE 177


>gi|122937219 F-box protein 41 [Homo sapiens]
          Length = 936

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 116 EGVPRIHAKAAEMRRIYSRIDRL-EAFVRMVGGRVARMEEQVTKAEAELGT 165
           EG+ R+  +A E   +  R++RL E   + + G+V R++ ++ +  AEL T
Sbjct: 261 EGLARLKIRALEKLEVDRRLERLSEEVEQKIAGQVGRLQAELERKAAELET 311


>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
          Length = 550

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 18/70 (25%), Positives = 36/70 (51%)

Query: 109 DSSHVVSEGVPRIHAKAAEMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPR 168
           D  HV  +   +   K AE+     R+++ EA V+ +  RV  +++++ +AE EL     
Sbjct: 420 DLKHVHGKLKKQFQEKVAELAHANRRVEQHEAEVKKLRLRVEELKKELAQAEDELDEAHN 479

Query: 169 AFKKLLHTMN 178
             +KL  +++
Sbjct: 480 QARKLQRSLD 489


>gi|221316695 multimerin 2 precursor [Homo sapiens]
          Length = 949

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 74  PGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHVVSEGVPRIHAKAAEMRRIYS 133
           PGAGARPE ++L A L  L   + E          +  + + +    +     E++ +YS
Sbjct: 358 PGAGARPEPDSLQARLGQLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYS 417

Query: 134 RIDRLEAFVRMVGGRVARMEEQVTKAE 160
             D  E F      +++++E QV + +
Sbjct: 418 ESD--ETF-----DQISKVERQVEELQ 437


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 18/46 (39%), Positives = 23/46 (50%)

Query: 15 LAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPL 60
          +A     Q  AWS +    + + SS+SGP E EGA   A    LPL
Sbjct: 1  MALPGSSQDQAWSLEPPAATAAASSSSGPQEREGAGSPAAPGTLPL 46


>gi|22208850 Golgi coiled-coil protein 1 [Homo sapiens]
          Length = 775

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 11/108 (10%)

Query: 76  AGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHV------VSEGVPRI--HAKAA- 126
           A A  ++E  +   + L   V+E    L  +R + +        + E   R+  H +A  
Sbjct: 279 AYAAEQMEGFELQTKQLTREVEELKSELQAIRDEKNQPDPRLQELQEEAARLKSHFQAQL 338

Query: 127 --EMRRIYSRIDRLEAFVRMVGGRVARMEEQVTKAEAELGTFPRAFKK 172
             EMR+     D+L    ++   RVA +E Q+++    LGT+ +A +K
Sbjct: 339 QQEMRKTALAEDQLRQQSQVEEQRVAALENQISEVSELLGTYEKAKQK 386


>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
           polypeptide A) phosphatase, subunit 1 isoform FCP1b
           [Homo sapiens]
          Length = 867

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 2   EGSFSDGGALPEGLAEEAEPQGAA-------WSGDSGTVSQSHSSASGPWEDEGAEDGAP 54
           +GS + GG +  G   +   QGA         S DS + S+S  + S     +G  +G  
Sbjct: 426 QGSCAQGGRVAPG---QRPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESEGKR 482

Query: 55  GRDLPLLRRAAAGYAA---CLLPGAGARPEV 82
           GR  P      AG  A    L PG  A P +
Sbjct: 483 GRQKPKAAPEGAGALAQGSSLEPGRPAAPSL 513


>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
           polypeptide A) phosphatase, subunit 1 isoform FCP1a
           [Homo sapiens]
          Length = 961

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 13/91 (14%)

Query: 2   EGSFSDGGALPEGLAEEAEPQGAA-------WSGDSGTVSQSHSSASGPWEDEGAEDGAP 54
           +GS + GG +  G   +   QGA         S DS + S+S  + S     +G  +G  
Sbjct: 426 QGSCAQGGRVAPG---QRPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESEGKR 482

Query: 55  GRDLPLLRRAAAGYAA---CLLPGAGARPEV 82
           GR  P      AG  A    L PG  A P +
Sbjct: 483 GRQKPKAAPEGAGALAQGSSLEPGRPAAPSL 513


>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
          Length = 274

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 2   EGSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLL 61
           EG  +   A P+  A   E  G+A + +S T + + +S S   ED  A++     D+P  
Sbjct: 151 EGDAATEQAAPQAPASSEEKAGSAET-ESATKASTDNSPSSKAEDAPAKEEPKQADVPAA 209

Query: 62  RRAAAGYAACLLPGAG---ARPEVEALDAS-LEDLLTRVDE 98
             AAA         A    A+P  E  ++S  E+ +  VDE
Sbjct: 210 VTAAAATTPAAEDAAAKATAQPPTETGESSQAEENIEAVDE 250


>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
          Length = 238

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 2   EGSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLL 61
           EG  +   A P+  A   E  G+A + +S T + + +S S   ED  A++     D+P  
Sbjct: 115 EGDAATEQAAPQAPASSEEKAGSAET-ESATKASTDNSPSSKAEDAPAKEEPKQADVPAA 173

Query: 62  RRAAAGYAACLLPGAG---ARPEVEALDAS-LEDLLTRVDE 98
             AAA         A    A+P  E  ++S  E+ +  VDE
Sbjct: 174 VTAAAATTPAAEDAAAKATAQPPTETGESSQAEENIEAVDE 214


>gi|169167062 PREDICTED: hypothetical protein LOC285556 [Homo
           sapiens]
          Length = 1826

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 60  LLRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHV 113
           LLR +AA  AA L  G+GAR   + L    +   T+  EFV  +  + G+  HV
Sbjct: 713 LLRSSAASVAAGLRKGSGARATADQLYIQSKKSQTKALEFV--VSKVEGEIKHV 764


>gi|113416182 PREDICTED: hypothetical protein LOC285556 [Homo
           sapiens]
          Length = 1826

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 60  LLRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHV 113
           LLR +AA  AA L  G+GAR   + L    +   T+  EFV  +  + G+  HV
Sbjct: 713 LLRSSAASVAAGLRKGSGARATADQLYIQSKKSQTKALEFV--VSKVEGEIKHV 764


>gi|113415686 PREDICTED: hypothetical protein LOC285556 [Homo
           sapiens]
          Length = 1826

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 60  LLRRAAAGYAACLLPGAGARPEVEALDASLEDLLTRVDEFVGMLDMLRGDSSHV 113
           LLR +AA  AA L  G+GAR   + L    +   T+  EFV  +  + G+  HV
Sbjct: 713 LLRSSAASVAAGLRKGSGARATADQLYIQSKKSQTKALEFV--VSKVEGEIKHV 764


>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
           1 [Homo sapiens]
          Length = 914

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 28  GDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGAGARPEVEALDA 87
           G    +  + SS  G W D+ +ED     D P L++  A Y    +PG+        L A
Sbjct: 188 GPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVA-YVQLNMPGSDLERRAHLLLA 246

Query: 88  SLE 90
            LE
Sbjct: 247 QLE 249


>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
           2 [Homo sapiens]
          Length = 859

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 28  GDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGAGARPEVEALDA 87
           G    +  + SS  G W D+ +ED     D P L++  A Y    +PG+        L A
Sbjct: 133 GPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVA-YVQLNMPGSDLERRAHLLLA 191

Query: 88  SLE 90
            LE
Sbjct: 192 QLE 194


>gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]
          Length = 703

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 27  SGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACL---LPGAGARPEVE 83
           +G SG+ S S  +   PWE + +   A     PLLRR  +  +  +   LP     PE+ 
Sbjct: 236 AGGSGSGSSSSEADREPWETQDSFSLAH----PLLRRLRSHSSTQILGSLPNQPLSPEMH 291

Query: 84  ALDASLEDLLTRVDE 98
            ++A +E L   +++
Sbjct: 292 IMEAQMEQLRGSIEK 306


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 3    GSFSDGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPG 55
            GS     +  EG +EE++ Q  +  G  G   QSH  ++  W   G   G  G
Sbjct: 1065 GSSGSQASDSEGHSEESDTQSVSGHGQDGPHQQSHQESARDW--SGGRSGRSG 1115


>gi|38176300 nestin [Homo sapiens]
          Length = 1621

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 9/88 (10%)

Query: 1    MEGSFSDGGALPEGLAEEAE---PQGAAWSGDSGTVSQSHSSASGPWE--DEGAEDGAPG 55
            + G   D    P    EE+E   P+GA  +  + T+  + S A  PW    E AE+  P 
Sbjct: 1157 LPGKSRDPWEPPREGREESEAEAPRGAEEAFPAETLGHTGSDAPSPWPLGSEEAEEDVP- 1215

Query: 56   RDLPLLRRAAAGYAACLLPGAGARPEVE 83
               P+L   +  Y   L    G +P+ E
Sbjct: 1216 ---PVLVSPSPTYTPILEDAPGPQPQAE 1240


>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
           sapiens]
          Length = 470

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 17  EEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGA 76
           E  EP   AWS  +GT S   ++A  P  D+  E   PG   P  RR  +   A  LP  
Sbjct: 263 EGTEPGSQAWSARAGTASWETAAAQRP--DQLEETRPPGAARPGARRLRS--LASRLPRG 318

Query: 77  G 77
           G
Sbjct: 319 G 319


>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
           sapiens]
          Length = 470

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 17  EEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGA 76
           E  EP   AWS  +GT S   ++A  P  D+  E   PG   P  RR  +   A  LP  
Sbjct: 263 EGTEPGSQAWSARAGTASWETAAAQRP--DQLEETRPPGAARPGARRLRS--LASRLPRG 318

Query: 77  G 77
           G
Sbjct: 319 G 319


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,956,855
Number of Sequences: 37866
Number of extensions: 419476
Number of successful extensions: 1802
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1766
Number of HSP's gapped (non-prelim): 86
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.