Search of human proteins with 8922886

Search of human proteins with 8922886

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8922886 DDX19-like protein [Homo sapiens]
         (478 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8922886 DDX19-like protein [Homo sapiens]                          942   0.0  
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H...   914   0.0  
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...   837   0.0  
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [...   730   0.0  
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap...   622   e-178
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s...   270   2e-72
gi|4503529 eukaryotic translation initiation factor 4A isoform 1...   268   8e-72
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...   255   5e-68
gi|4758112 HLA-B associated transcript 1 [Homo sapiens]               209   4e-54
gi|18375623 HLA-B associated transcript 1 [Homo sapiens]              209   4e-54
gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi...   204   1e-52
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi...   204   2e-52
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi...   195   9e-50
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...   167   2e-41
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap...   159   4e-39
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]            154   2e-37
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]            154   2e-37
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...   153   4e-37
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...   152   5e-37
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...   152   5e-37
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi...   149   4e-36
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi...   144   2e-34
gi|9506931 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Homo sapiens]   143   4e-34
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap...   140   3e-33
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...   139   7e-33
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...   138   1e-32
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...   138   1e-32
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...   138   1e-32
gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo sapi...   137   2e-32
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...   137   3e-32

>gi|8922886 DDX19-like protein [Homo sapiens]
          Length = 478

 Score =  942 bits (2434), Expect = 0.0
 Identities = 478/478 (100%), Positives = 478/478 (100%)

Query: 1   MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNGIIKTSTTAEKTDEEEKEDRAAQSL 60
           MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNGIIKTSTTAEKTDEEEKEDRAAQSL
Sbjct: 1   MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNGIIKTSTTAEKTDEEEKEDRAAQSL 60

Query: 61  LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN 120
           LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
Sbjct: 61  LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN 120

Query: 121 ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKV 180
           ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKV
Sbjct: 121 ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKV 180

Query: 181 IEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL 240
           IEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
Sbjct: 181 IEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL 240

Query: 241 DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE 300
           DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE
Sbjct: 241 DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE 300

Query: 301 ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA 360
           ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
Sbjct: 301 ETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA 360

Query: 361 LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE 420
           LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
Sbjct: 361 LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE 420

Query: 421 TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 478
           TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
Sbjct: 421 TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 478


>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
           sapiens]
          Length = 479

 Score =  914 bits (2361), Expect = 0.0
 Identities = 460/479 (96%), Positives = 473/479 (98%), Gaps = 1/479 (0%)

Query: 1   MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNG-IIKTSTTAEKTDEEEKEDRAAQS 59
           MATDSWALAVDEQEAA +S++NL +KEEK+K DTNG ++KT+  AEKTDEEEKEDRAAQS
Sbjct: 1   MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDTNGAVVKTNANAEKTDEEEKEDRAAQS 60

Query: 60  LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE 119
           LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
Sbjct: 61  LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE 120

Query: 120 NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGK 179
           NALP+MLAEPPQNLIAQSQSGTGKTAAFVLAMLS+VEP+++YPQCLCLSPTYELALQTGK
Sbjct: 121 NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGK 180

Query: 180 VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV 239
           VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
Sbjct: 181 VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV 240

Query: 240 LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 299
           LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE
Sbjct: 241 LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 300

Query: 300 EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV 359
           EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
Sbjct: 301 EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV 360

Query: 360 ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN 419
           ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
Sbjct: 361 ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN 420

Query: 420 ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 478
           ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
Sbjct: 421 ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 479


>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
           [Homo sapiens]
          Length = 448

 Score =  837 bits (2162), Expect = 0.0
 Identities = 430/479 (89%), Positives = 442/479 (92%), Gaps = 32/479 (6%)

Query: 1   MATDSWALAVDEQEAAVKSMTNLQIKEEKVKADTNG-IIKTSTTAEKTDEEEKEDRAAQS 59
           MATDSWALAVDEQEAA +S++NL +KEEK+K DTNG ++KT+  AEKTDEEEKEDRAAQS
Sbjct: 1   MATDSWALAVDEQEAAAESLSNLHLKEEKIKPDTNGAVVKTNANAEKTDEEEKEDRAAQS 60

Query: 60  LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE 119
           LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRL                     
Sbjct: 61  LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRL--------------------- 99

Query: 120 NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGK 179
                     PQNLIAQSQSGTGKTAAFVLAMLS+VEP+++YPQCLCLSPTYELALQTGK
Sbjct: 100 ----------PQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGK 149

Query: 180 VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV 239
           VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
Sbjct: 150 VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV 209

Query: 240 LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 299
           LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE
Sbjct: 210 LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE 269

Query: 300 EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV 359
           EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
Sbjct: 270 EETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV 329

Query: 360 ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN 419
           ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
Sbjct: 330 ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN 389

Query: 420 ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 478
           ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
Sbjct: 390 ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN 448


>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
           [Homo sapiens]
          Length = 370

 Score =  730 bits (1885), Expect = 0.0
 Identities = 365/370 (98%), Positives = 370/370 (100%)

Query: 109 MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLS 168
           MGFNRPSKIQENALP+MLAEPPQNLIAQSQSGTGKTAAFVLAMLS+VEP+++YPQCLCLS
Sbjct: 1   MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLS 60

Query: 169 PTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLK 228
           PTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLK
Sbjct: 61  PTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLK 120

Query: 229 FIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVV 288
           FIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVV
Sbjct: 121 FIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVV 180

Query: 289 PDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWL 348
           PDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWL
Sbjct: 181 PDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWL 240

Query: 349 AAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFD 408
           AAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFD
Sbjct: 241 AAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFD 300

Query: 409 LPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTD 468
           LPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTD
Sbjct: 301 LPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTD 360

Query: 469 DLDEIEKIAN 478
           DLDEIEKIAN
Sbjct: 361 DLDEIEKIAN 370


>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
           sapiens]
          Length = 483

 Score =  622 bits (1603), Expect = e-178
 Identities = 299/429 (69%), Positives = 370/429 (86%), Gaps = 1/429 (0%)

Query: 48  DEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVY 107
           DEE+  D AA SLLNKLI  +LV+++++VEVLQ+DP+SPLYSVK+FEELRLK +LL+G+Y
Sbjct: 54  DEEDVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIY 113

Query: 108 AMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCL 167
           AMGFNRPSKIQE ALPMMLA PPQNLIAQSQSGTGKTAAFVLAMLSRV   + +PQCLCL
Sbjct: 114 AMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCL 173

Query: 168 SPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKL 227
           +PTYELALQTG+V+EQMGKF  ++++ YA+RGN++ RG  I++QI+IGTPGTVLDWC KL
Sbjct: 174 APTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKL 233

Query: 228 KFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKV 287
           K ID  KI+VFVLDEADVMI TQG  D SIRIQR LP  CQMLLFSATFEDSVW FA+++
Sbjct: 234 KLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERI 293

Query: 288 VPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASW 347
           +PDPNVIKL++EE TL+ I+QYYVLC  R +K+QALCN+YG+ITI QA+IFC TR+ A W
Sbjct: 294 IPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKW 353

Query: 348 LAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINF 407
           L  E+ ++GHQV+LLSGE+ VEQRA++I+RFR+GKEKVL+TTNVCARGIDV+QV++V+NF
Sbjct: 354 LTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNF 413

Query: 408 DLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDT 467
           DLPV +   PD ETYLHRIGRTGRFGK+GLA NM++     +++ +IQ+HFN  I++L+ 
Sbjct: 414 DLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLM-KIQDHFNSSIKQLNA 472

Query: 468 DDLDEIEKI 476
           +D+DEIEKI
Sbjct: 473 EDMDEIEKI 481


>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
           sapiens]
          Length = 407

 Score =  270 bits (690), Expect = 2e-72
 Identities = 155/389 (39%), Positives = 241/389 (61%), Gaps = 18/389 (4%)

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
           V +F+++ LK  LL+G+YA GF +PS IQ+ A+   +     ++IAQ+QSGTGKTA F +
Sbjct: 32  VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG--YDVIAQAQSGTGKTATFAI 89

Query: 150 AMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG-----NKLER 204
           ++L ++E   +  Q L L+PT ELA Q  KVI  +G +       +A  G     N++++
Sbjct: 90  SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT--CHACIGGTNVRNEMQK 147

Query: 205 GQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
            Q  +  IV+GTPG V D  ++ +++ PK IK+FVLDEAD M++ +G +DQ   I + L 
Sbjct: 148 LQAEAPHIVVGTPGRVFDMLNR-RYLSPKWIKMFVLDEADEMLS-RGFKDQIYEIFQKLN 205

Query: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 324
            + Q++L SAT    V +  +K + DP  I +K+EE TL+ IKQ+Y+     + K   LC
Sbjct: 206 TSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLC 265

Query: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
           +LY  +TI QA+IF +TR+   WL  ++      V+ L G+M  ++R  ++  FR G  +
Sbjct: 266 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325

Query: 385 VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDS 444
           VL+TT++ ARGIDV+QVS+VIN+DLP ++      E Y+HRIGR GRFG++G+A+N V +
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNR------ENYIHRIGRGGRFGRKGVAINFV-T 378

Query: 445 KHSMNILNRIQEHFNKKIERLDTDDLDEI 473
           +    IL  I+  +N  +E +  +  D I
Sbjct: 379 EEDKRILRDIETFYNTTVEEMPMNVADLI 407


>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
           [Homo sapiens]
          Length = 406

 Score =  268 bits (685), Expect = 8e-72
 Identities = 155/388 (39%), Positives = 237/388 (61%), Gaps = 16/388 (4%)

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAFV 148
           V SF+++ L   LL+G+YA GF +PS IQ+ A LP +      ++IAQ+QSGTGKTA F 
Sbjct: 31  VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFA 87

Query: 149 LAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKI 208
           +++L ++E   +  Q L L+PT ELA Q  KV+  +G +      A     N     QK+
Sbjct: 88  ISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKL 147

Query: 209 SEQ---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
             +   I++GTPG V D  ++ +++ PK IK+FVLDEAD M++ +G +DQ   I + L  
Sbjct: 148 QMEAPHIIVGTPGRVFDMLNR-RYLSPKYIKMFVLDEADEMLS-RGFKDQIYDIFQKLNS 205

Query: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCN 325
           N Q++L SAT    V +  +K + DP  I +K+EE TL+ I+Q+Y+     + K   LC+
Sbjct: 206 NTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCD 265

Query: 326 LYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
           LY  +TI QA+IF +TR+   WL  ++      V+ + G+M  ++R  ++  FR G  +V
Sbjct: 266 LYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRV 325

Query: 386 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
           L+TT++ ARGIDV+QVS+VIN+DLP ++      E Y+HRIGR GRFG++G+A+NMV ++
Sbjct: 326 LITTDLLARGIDVQQVSLVINYDLPTNR------ENYIHRIGRGGRFGRKGVAINMV-TE 378

Query: 446 HSMNILNRIQEHFNKKIERLDTDDLDEI 473
                L  I+  +N  IE +  +  D I
Sbjct: 379 EDKRTLRDIETFYNTSIEEMPLNVADLI 406


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score =  255 bits (652), Expect = 5e-68
 Identities = 145/389 (37%), Positives = 239/389 (61%), Gaps = 23/389 (5%)

Query: 92  SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151
           +F+ + L+  LL+G+YA GF +PS IQ+ A+  ++    +++IAQSQSGTGKTA F +++
Sbjct: 39  TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQSQSGTGKTATFSISV 96

Query: 152 LSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGN-------KLER 204
           L  ++   R  Q L L+PT ELA+Q  K +  +G  Y  ++    + G        KL+ 
Sbjct: 97  LQCLDIQVRETQALILAPTRELAVQIQKGLLALGD-YMNVQCHACIGGTNVGEDIRKLDY 155

Query: 205 GQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
           GQ     +V GTPG V D   + + +  + IK+ VLDEAD M+  +G ++Q   + R LP
Sbjct: 156 GQ----HVVAGTPGRVFDMIRR-RSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYLP 209

Query: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 324
              Q++L SAT    + +   K + DP  I +KR+E TL+ IKQ++V     + KF  LC
Sbjct: 210 PATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 269

Query: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
           +LY  +TI QA+IFC+T++   WL  ++ +    V+ + G+M  ++R ++++ FR G  +
Sbjct: 270 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASR 329

Query: 385 VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDS 444
           VL++T+V ARG+DV QVS++IN+DLP ++      E Y+HRIGR+GR+G++G+A+N V  
Sbjct: 330 VLISTDVWARGLDVPQVSLIINYDLPNNR------ELYIHRIGRSGRYGRKGVAINFV-K 382

Query: 445 KHSMNILNRIQEHFNKKIERLDTDDLDEI 473
              + IL  I+++++ +I+ +  +  D I
Sbjct: 383 NDDIRILRDIEQYYSTQIDEMPMNVADLI 411


>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  209 bits (532), Expect = 4e-54
 Identities = 130/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)

Query: 80  QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQS 137
           ++D      S+ S  F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q+
Sbjct: 32  KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89

Query: 138 QSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 197
           +SG GKTA FVLA L ++EP       L +  T ELA Q  K  E+  K+ P +K+A   
Sbjct: 90  KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149

Query: 198 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 253
            G  +++ +++ ++    IV+GTPG +L   ++ K ++ K IK F+LDE D M+     +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208

Query: 254 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 312
                I RM P   Q+++FSAT    +    +K + DP  I +  E + TL  ++QYYV 
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268

Query: 313 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 372
               +EK + L +L   +   Q +IF  + +    LA  L ++      +   M  E+R 
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327

Query: 373 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 432
           +  ++F++ + ++LV TN+  RG+D+E+V++  N+D+P D D      TYLHR+ R GRF
Sbjct: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381

Query: 433 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
           G +GLA+  V  ++   ILN +Q+ F   I  L  D++D
Sbjct: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419


>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  209 bits (532), Expect = 4e-54
 Identities = 130/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)

Query: 80  QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQS 137
           ++D      S+ S  F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q+
Sbjct: 32  KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89

Query: 138 QSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 197
           +SG GKTA FVLA L ++EP       L +  T ELA Q  K  E+  K+ P +K+A   
Sbjct: 90  KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149

Query: 198 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 253
            G  +++ +++ ++    IV+GTPG +L   ++ K ++ K IK F+LDE D M+     +
Sbjct: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208

Query: 254 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 312
                I RM P   Q+++FSAT    +    +K + DP  I +  E + TL  ++QYYV 
Sbjct: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268

Query: 313 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 372
               +EK + L +L   +   Q +IF  + +    LA  L ++      +   M  E+R 
Sbjct: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327

Query: 373 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 432
           +  ++F++ + ++LV TN+  RG+D+E+V++  N+D+P D D      TYLHR+ R GRF
Sbjct: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381

Query: 433 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
           G +GLA+  V  ++   ILN +Q+ F   I  L  D++D
Sbjct: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419


>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
           sapiens]
          Length = 427

 Score =  204 bits (520), Expect = 1e-52
 Identities = 121/378 (32%), Positives = 202/378 (53%), Gaps = 15/378 (3%)

Query: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
           F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L
Sbjct: 46  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATL 103

Query: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ- 211
            ++EP +     L +  T ELA Q  K  E+  K+ P +K++    G  +++ +++ ++ 
Sbjct: 104 QQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKN 163

Query: 212 ---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268
              +V+GTPG +L       F   K +K FVLDE D M+     +     I R+ P   Q
Sbjct: 164 CPHVVVGTPGRILALVRNRSF-SLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQ 222

Query: 269 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLY 327
            ++FSAT    +    +K + DP  + +  E + TL  ++QYYV      EK + L +L 
Sbjct: 223 CMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKD-SEKNRKLFDLL 281

Query: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
             +   Q +IF  + +    LA  L ++      +   M  E+R +  ++F++ + ++LV
Sbjct: 282 DVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILV 341

Query: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
            TN+  RG+D+E+V++V N+D+P D D      TYLHR+ R GRFG +GLA+  V  ++ 
Sbjct: 342 ATNLFGRGMDIERVNIVFNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDEND 395

Query: 448 MNILNRIQEHFNKKIERL 465
             ILN +Q+ F   +  L
Sbjct: 396 AKILNDVQDRFEVNVAEL 413


>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
           sapiens]
          Length = 483

 Score =  204 bits (518), Expect = 2e-52
 Identities = 135/380 (35%), Positives = 215/380 (56%), Gaps = 18/380 (4%)

Query: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
           FE+  LK +LL G++ MG+ +PS IQE ++P+ L+   ++++A++++GTGK+ A+++ +L
Sbjct: 98  FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLL 155

Query: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKISE- 210
            R++      Q + + PT ELALQ  ++  Q+ K     K+     G  L     ++ + 
Sbjct: 156 ERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDT 215

Query: 211 -QIVIGTPGTVLDWCSK-LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268
             +VI TPG +LD   K +  +D   +++ VLDEAD +++    Q     I   LP+N Q
Sbjct: 216 VHVVIATPGRILDLIKKGVAKVD--HVQMIVLDEADKLLSQDFVQIME-DIILTLPKNRQ 272

Query: 269 MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYG 328
           +LL+SATF  SV KF    +  P  I L  EE TL  + QYY   + R +K   L  L+ 
Sbjct: 273 ILLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTER-QKVHCLNTLFS 330

Query: 329 AITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVT 388
            + I Q++IFC++ +    LA ++S+ G+    +  +M  E R  V   FR G  + LV 
Sbjct: 331 RLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVC 390

Query: 389 TNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSM 448
           T++  RGID++ V+VVINFD P         ETYLHRIGR+GRFG  GLA+N++      
Sbjct: 391 TDLFTRGIDIQAVNVVINFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYDDRF 444

Query: 449 NILNRIQEHFNKKIERLDTD 468
           N L  I+E    +I+ + ++
Sbjct: 445 N-LKSIEEQLGTEIKPIPSN 463


>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
           sapiens]
          Length = 824

 Score =  195 bits (495), Expect = 9e-50
 Identities = 128/376 (34%), Positives = 199/376 (52%), Gaps = 18/376 (4%)

Query: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
           FE L L   +L+G+ A GF RPS +Q  A+P  L     +LI Q++SGTGKT  F    L
Sbjct: 64  FESLLLSRPVLEGLRAAGFERPSPVQLKAIP--LGRCGLDLIVQAKSGTGKTCVFSTIAL 121

Query: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ- 211
             +   +   Q L L+PT E+A+Q   VI  +G     L+    + G  L + +   ++ 
Sbjct: 122 DSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKC 181

Query: 212 -IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQML 270
            I +G+PG +     +L +++P  I++F+LDEAD ++     Q+Q   I   LP + QML
Sbjct: 182 HIAVGSPGRIKQLI-ELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240

Query: 271 LFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSR-------DEKFQAL 323
             SAT+ + +     K + DP  ++L   + +L  +KQYY + +S        +EK Q L
Sbjct: 241 AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHL 300

Query: 324 CNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKE 383
             L+  I   QA++F +    A  LA  LS +G     +SG M   QR   + + +    
Sbjct: 301 QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHC 360

Query: 384 KVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVD 443
           +VL++T++ +RGID E+V++V+N D+P+D       ETY+HRIGR GRFG  GL V    
Sbjct: 361 RVLISTDLTSRGIDAEKVNLVVNLDVPLDW------ETYMHRIGRAGRFGTLGLTVTYCC 414

Query: 444 SKHSMNILNRIQEHFN 459
                N++ RI +  N
Sbjct: 415 RGEEENMMMRIAQKCN 430


>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
           [Homo sapiens]
          Length = 455

 Score =  167 bits (423), Expect = 2e-41
 Identities = 111/386 (28%), Positives = 202/386 (52%), Gaps = 16/386 (4%)

Query: 91  KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
           K+F++L +   L +    +G+ +P+KIQ  A+P+ L    +++I  +++G+GKT AF L 
Sbjct: 24  KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQG--RDIIGLAETGSGKTGAFALP 81

Query: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG-NKLERGQKIS 209
           +L+ +  + +    L L+PT ELA Q  +  E +G     ++ A  V G + + +   ++
Sbjct: 82  ILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG-VQSAVIVGGIDSMSQSLALA 140

Query: 210 EQ--IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
           ++  I+I TPG ++D     K  + + +K  V+DEAD  I     + +  +I +++PR+ 
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEAD-RILNMDFETEVDKILKVIPRDR 199

Query: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 327
           +  LFSAT    V K  +  + +P    +  + +T++ ++QYY+   S+  K   L  + 
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKF-KDTYLVYIL 258

Query: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
             +     MIFC T       A  L   G     L G+M   +R   + +F+     +L+
Sbjct: 259 NELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILL 318

Query: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
            T+V +RG+D+  V VV+NFD+P        ++ Y+HR+GRT R G+ G A+  V +++ 
Sbjct: 319 ATDVASRGLDIPHVDVVVNFDIPT------HSKDYIHRVGRTARAGRSGKAITFV-TQYD 371

Query: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
           + +  RI+    KK+    T D DE+
Sbjct: 372 VELFQRIEHLIGKKLPGFPTQD-DEV 396


>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
           sapiens]
          Length = 796

 Score =  159 bits (403), Expect = 4e-39
 Identities = 140/481 (29%), Positives = 223/481 (46%), Gaps = 54/481 (11%)

Query: 5   SWALA-VDEQEAAVKSMTNLQIKEEKVK--------------------ADTNGIIKTSTT 43
           SWALA V  Q    ++ T L  K EKV+                    A      K    
Sbjct: 98  SWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSGKLEKEKEAKEGSEPKEQED 157

Query: 44  AEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQR--------------DPNSPLYS 89
            ++ DEE  ED A+++  +     N++   + ++V  R              +  S    
Sbjct: 158 LQENDEEGSEDEASETDYSSA-DENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDE 216

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
             SF+++ L   LL+ + AMGF +P+ IQ+  +P+ L    +++ A + +GTGKTAAF L
Sbjct: 217 NLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLG--KDICACAATGTGKTAAFAL 274

Query: 150 AMLSRVEPSDRYP---QCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG---NKLE 203
            +L R+    R     + L L PT EL +Q   V  Q+ +F   +    AV G      E
Sbjct: 275 PVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQE 333

Query: 204 RGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML 263
              + +  I+I TPG ++D            I+V +LDEAD M+  +  ++Q   I RM 
Sbjct: 334 AALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRML-DEYFEEQMKEIIRMC 392

Query: 264 PRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYV-LCSSRDEKFQA 322
             + Q +LFSAT  D V   A   + +P  I +    +    ++Q ++ +  +R+   +A
Sbjct: 393 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREA 452

Query: 323 LCNLYGAITIAQ-AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREG 381
           +       T     M+F  T+K A  +   L   G QV  L G +   QR   + RF++ 
Sbjct: 453 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 512

Query: 382 KEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNM 441
           +  +LV T+V ARG+D+E V  VINF +P         + Y+HR+GRT R G+ G +V++
Sbjct: 513 QIDILVATDVAARGLDIEGVKTVINFTMP------NTIKHYVHRVGRTARAGRAGRSVSL 566

Query: 442 V 442
           V
Sbjct: 567 V 567


>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  154 bits (388), Expect = 2e-37
 Identities = 116/365 (31%), Positives = 185/365 (50%), Gaps = 20/365 (5%)

Query: 92  SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151
           SF       QL+  +    + +P+ IQ   +P+ L+   +++I  +++G+GKTAAF+  M
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSG--RDMIGIAKTGSGKTAAFIWPM 311

Query: 152 LSRV------EPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG 205
           L  +      EP D  P  + + PT EL  Q     ++ GK Y    +A    G+  E+ 
Sbjct: 312 LIHIMDQKELEPGDG-PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query: 206 QKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML 263
           + + E  +IV+ TPG ++D   K K  + +++   V DEAD M    G + Q   I   +
Sbjct: 371 KALQEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMF-DMGFEYQVRSIASHV 428

Query: 264 PRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQAL 323
             + Q LLFSATF   + K A+ ++ DP  +      E  + + Q   +  S   K+  L
Sbjct: 429 RPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWL 488

Query: 324 CNLYGAITIAQAMIFCHTRKT-ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGK 382
                  T + +++   T+K  A  LA  L +EGH + LL G+M   +R  VI  F++  
Sbjct: 489 TRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKD 548

Query: 383 EKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV 442
             VLV T+V ARG+D+  +  VIN+D+  D D      T+ HRIGRTGR G++G+A  ++
Sbjct: 549 IPVLVATDVAARGLDIPSIKTVINYDVARDID------THTHRIGRTGRAGEKGVAYTLL 602

Query: 443 DSKHS 447
             K S
Sbjct: 603 TPKDS 607


>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  154 bits (388), Expect = 2e-37
 Identities = 116/365 (31%), Positives = 185/365 (50%), Gaps = 20/365 (5%)

Query: 92  SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151
           SF       QL+  +    + +P+ IQ   +P+ L+   +++I  +++G+GKTAAF+  M
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSG--RDMIGIAKTGSGKTAAFIWPM 311

Query: 152 LSRV------EPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG 205
           L  +      EP D  P  + + PT EL  Q     ++ GK Y    +A    G+  E+ 
Sbjct: 312 LIHIMDQKELEPGDG-PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA 370

Query: 206 QKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML 263
           + + E  +IV+ TPG ++D   K K  + +++   V DEAD M    G + Q   I   +
Sbjct: 371 KALQEGAEIVVCTPGRLIDHVKK-KATNLQRVSYLVFDEADRMF-DMGFEYQVRSIASHV 428

Query: 264 PRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQAL 323
             + Q LLFSATF   + K A+ ++ DP  +      E  + + Q   +  S   K+  L
Sbjct: 429 RPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWL 488

Query: 324 CNLYGAITIAQAMIFCHTRKT-ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGK 382
                  T + +++   T+K  A  LA  L +EGH + LL G+M   +R  VI  F++  
Sbjct: 489 TRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKD 548

Query: 383 EKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMV 442
             VLV T+V ARG+D+  +  VIN+D+  D D      T+ HRIGRTGR G++G+A  ++
Sbjct: 549 IPVLVATDVAARGLDIPSIKTVINYDVARDID------THTHRIGRTGRAGEKGVAYTLL 602

Query: 443 DSKHS 447
             K S
Sbjct: 603 TPKDS 607


>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
           sapiens]
          Length = 662

 Score =  153 bits (386), Expect = 4e-37
 Identities = 126/439 (28%), Positives = 211/439 (48%), Gaps = 47/439 (10%)

Query: 41  STTAEKTDEEE------KEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFE 94
           S   +K+DE++        +R  Q L +        +  + + V     N P + ++SF 
Sbjct: 125 SRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH-IESFS 183

Query: 95  ELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSR 154
           ++ +   ++  +    + RP+ +Q++A+P++  +  ++L+A +Q+G+GKTAAF+L +LS+
Sbjct: 184 DVEMGEIIMGNIELTRYTRPTPVQKHAIPII--KEKRDLMACAQTGSGKTAAFLLPILSQ 241

Query: 155 VEPSD------------------RYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYA 196
           +                      +YP  L L+PT ELA+Q   + E+  KF    ++   
Sbjct: 242 IYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRSRVRPC 298

Query: 197 VRGNKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQG 251
           V     + GQ+I +      +++ TPG ++D   + K I     K  VLDEAD M+   G
Sbjct: 299 VVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRML-DMG 356

Query: 252 HQDQSIRI---QRMLPRNCQ-MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIK 307
            + Q  RI     M P+  +  ++FSATF   +   A+  + +   + + R   T + I 
Sbjct: 357 FEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416

Query: 308 QYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMM 367
           Q  V     D++   L  L      +  ++F  T+K A  L   L  EG+    + G+  
Sbjct: 417 QKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 476

Query: 368 VEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIG 427
              R   + +FR GK  +LV T V ARG+D+  V  VINFDLP       D E Y+HRIG
Sbjct: 477 QRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLP------SDIEEYVHRIG 530

Query: 428 RTGRFGKRGLAVNMVDSKH 446
           RTGR G  GLA +  + ++
Sbjct: 531 RTGRVGNLGLATSFFNERN 549


>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  152 bits (385), Expect = 5e-37
 Identities = 119/388 (30%), Positives = 195/388 (50%), Gaps = 41/388 (10%)

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
           +++F ++ +   ++  +    + RP+ +Q++A+P++  +  ++L+A +Q+G+GKTAAF+L
Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGK--RDLMACAQTGSGKTAAFLL 234

Query: 150 AMLSRVEPSD------------------RYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 191
            +LS++                      +YP  L L+PT ELA+Q   + E+  KF    
Sbjct: 235 PILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRS 291

Query: 192 KLAYAVRGNKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVM 246
           ++   V     + GQ+I +      +++ TPG ++D   + K I     K  VLDEAD M
Sbjct: 292 RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRM 350

Query: 247 IATQGHQDQSIRI---QRMLPRNCQ-MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEET 302
           +   G + Q  RI     M P+  +  ++FSATF   +   A+  + +   + + R   T
Sbjct: 351 L-DMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 409

Query: 303 LDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALL 362
            + I Q  V     D++   L  L    + +  ++F  T+K A  L   L  EG+    +
Sbjct: 410 SENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSI 469

Query: 363 SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 422
            G+     R   + +FR GK  +LV T V ARG+D+  V  VINFDLP       D E Y
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLP------SDIEEY 523

Query: 423 LHRIGRTGRFGKRGLAVNMVDSKHSMNI 450
           +HRIGRTGR G  GLA +  + K +MNI
Sbjct: 524 VHRIGRTGRVGNLGLATSFFNEK-NMNI 550


>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  152 bits (385), Expect = 5e-37
 Identities = 119/388 (30%), Positives = 195/388 (50%), Gaps = 41/388 (10%)

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
           +++F ++ +   ++  +    + RP+ +Q++A+P++  +  ++L+A +Q+G+GKTAAF+L
Sbjct: 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGK--RDLMACAQTGSGKTAAFLL 234

Query: 150 AMLSRVEPSD------------------RYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 191
            +LS++                      +YP  L L+PT ELA+Q   + E+  KF    
Sbjct: 235 PILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQ---IYEEARKFSYRS 291

Query: 192 KLAYAVRGNKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVM 246
           ++   V     + GQ+I +      +++ TPG ++D   + K I     K  VLDEAD M
Sbjct: 292 RVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK-IGLDFCKYLVLDEADRM 350

Query: 247 IATQGHQDQSIRI---QRMLPRNCQ-MLLFSATFEDSVWKFAQKVVPDPNVIKLKREEET 302
           +   G + Q  RI     M P+  +  ++FSATF   +   A+  + +   + + R   T
Sbjct: 351 L-DMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST 409

Query: 303 LDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALL 362
            + I Q  V     D++   L  L    + +  ++F  T+K A  L   L  EG+    +
Sbjct: 410 SENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSI 469

Query: 363 SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 422
            G+     R   + +FR GK  +LV T V ARG+D+  V  VINFDLP       D E Y
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLP------SDIEEY 523

Query: 423 LHRIGRTGRFGKRGLAVNMVDSKHSMNI 450
           +HRIGRTGR G  GLA +  + K +MNI
Sbjct: 524 VHRIGRTGRVGNLGLATSFFNEK-NMNI 550


>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
           sapiens]
          Length = 483

 Score =  149 bits (377), Expect = 4e-36
 Identities = 116/394 (29%), Positives = 197/394 (50%), Gaps = 26/394 (6%)

Query: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
           F EL L   L++    +G  +P+ +Q   +P +L    ++ +  +++G+GKTAAFVL +L
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEG--RDCLGCAKTGSGKTAAFVLPIL 61

Query: 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG-----NKLERGQK 207
            ++        CL L+PT ELA Q  +    +GK    LK    V G       LE  +K
Sbjct: 62  QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLG-LKDCIIVGGMDMVAQALELSRK 120

Query: 208 ISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRML---P 264
               +VI TPG + D          KKI+  V+DEAD ++  QG  D ++ ++ +L   P
Sbjct: 121 --PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLE-QGCTDFTVDLEAILAAVP 177

Query: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 324
              Q LLFSAT  D++ +        P   + +    T++ + Q Y+L   +  K   L 
Sbjct: 178 ARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEK-VKDAYLV 236

Query: 325 NLYGAITIAQA----MIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFRE 380
           +L             +IF +T KT   L   L K       L   M  ++R A + +F+ 
Sbjct: 237 HLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKS 296

Query: 381 GKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVN 440
              ++L+ T+V +RG+D+  V VVIN + P    G P  + Y+HR+GRT R G++G A+ 
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTP----GLP--KIYIHRVGRTARAGRQGQAIT 350

Query: 441 MVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE 474
           +V +++ +++++ I+E   KK+E    ++ + ++
Sbjct: 351 LV-TQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQ 383


>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
           sapiens]
          Length = 820

 Score =  144 bits (362), Expect = 2e-34
 Identities = 112/397 (28%), Positives = 191/397 (48%), Gaps = 52/397 (13%)

Query: 90  VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149
           ++S+++  L P +L+ +   G+  P+ IQ  A+P+ L    +++I  +++G+GKTAAF++
Sbjct: 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQN--RDIIGVAETGSGKTAAFLI 447

Query: 150 AML---------SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGN 200
            +L          R+E SD+ P  + L+PT ELA Q  +   + GK  P      AV G 
Sbjct: 448 PLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK--PLGIRTVAVIGG 505

Query: 201 KLERGQ----KISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQS 256
                Q    ++  +IVI TPG ++D     +++   +    VLDEAD MI   G +   
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLEN-RYLVLSRCTYVVLDEADRMI-DMGFEPDV 563

Query: 257 IRIQRMLP--------------------------RNCQMLLFSATFEDSVWKFAQKVVPD 290
            +I   +P                          +  Q ++F+AT   +V + A+  +  
Sbjct: 564 QKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRR 623

Query: 291 PNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAA 350
           P V+ +    +  + ++Q   L S  +++ + L  L         +IF + +K    LA 
Sbjct: 624 PAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFD-PPIIIFVNQKKGCDVLAK 682

Query: 351 ELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLP 410
            L K G+    L G    EQR   +   + G + +LV T+V  RGID++ VS+V+N+D+ 
Sbjct: 683 SLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMA 742

Query: 411 VDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
                  + E Y+HRIGRTGR GK G+A+  +  + S
Sbjct: 743 ------KNIEDYIHRIGRTGRAGKSGVAITFLTKEDS 773


>gi|9506931 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 [Homo sapiens]
          Length = 547

 Score =  143 bits (360), Expect = 4e-34
 Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 49/390 (12%)

Query: 93  FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152
           FE + L P+LLQ V  +G++RP+ IQE A+P  LA   ++L+A++++G+GKTAA+ + ML
Sbjct: 9   FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIP--LALEGKDLLARARTGSGKTAAYAIPML 66

Query: 153 SRV-------EPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYP-ELKLA--YAVRGNKL 202
             +          ++  + L L PT ELA Q   +I+Q+  +   ++++A   A   +  
Sbjct: 67  QLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCARDVRVANVSAAEDSVS 126

Query: 203 ERGQKISE-QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQR 261
           +R   + +  +V+GTP  +L    +        +++ V+DEAD++ +  G +++   +  
Sbjct: 127 QRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSF-GFEEELKSLLC 185

Query: 262 MLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE-ETLDTIKQYYVLCSSRDEKF 320
            LPR  Q  L SATF + V    + ++ +P  +KL+  +    D ++Q+ V+C + ++KF
Sbjct: 186 HLPRIYQAFLMSATFNEDVQALKELILHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKF 245

Query: 321 QALCNLYGAITI-AQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR 379
             L  L     I  ++++F +T + +  L   L +      +L+GE+ +  R  +I +F 
Sbjct: 246 LLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPTCVLNGELPLRSRCHIISQFN 305

Query: 380 EGKEKVLVTTNV---------------------------CARGIDVEQVSVVINFDLPVD 412
           +G    ++ T+                             ARGID   VS V+NFDLP  
Sbjct: 306 QGFYDCVIATDAEVLGAPVKGKRRGRGPKGDKASDPEAGVARGIDFHHVSAVLNFDLP-- 363

Query: 413 KDGNPDNETYLHRIGRTGRFGKRGLAVNMV 442
               P  E Y+HR GRT R    G+ +  V
Sbjct: 364 ----PTPEAYIHRAGRTARANNPGIVLTFV 389


>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
           sapiens]
          Length = 619

 Score =  140 bits (353), Expect = 3e-33
 Identities = 113/429 (26%), Positives = 208/429 (48%), Gaps = 21/429 (4%)

Query: 23  LQIKEEKVKADTNGIIKTSTTAEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRD 82
           LQ+KE++ K+  +   K  +  E         +    +LN  ++ + ++N  Q   +   
Sbjct: 137 LQVKEKEEKSKLSNPQKADSEPESPLNASYVYKEHPFILN--LQEDQIENLKQQLGILVQ 194

Query: 83  PNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTG 142
                  +  FE   L   L   +   G+  P+ IQ   +P+ L    ++++A + +G+G
Sbjct: 195 GQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLG--RDILASADTGSG 252

Query: 143 KTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG--- 199
           KTAAF+L ++ R     + P  L L+PT ELA+Q  +  +++    P +K    V G   
Sbjct: 253 KTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPL 312

Query: 200 -NKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIR 258
             +L R Q+   +++I TPG +LD   K   ++   +K+ V+DEAD M+   G Q Q + 
Sbjct: 313 PPQLYRLQQ-HVKVIIATPGRLLD-IIKQSSVELCGVKIVVVDEADTML-KMGFQQQVLD 369

Query: 259 IQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQ--YYVLCSSR 316
           I   +P +CQ +L SAT   S+ + A +++ +P  I    +      ++Q   +V   ++
Sbjct: 370 ILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAK 429

Query: 317 DEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSK-EGHQVALLSGEMMVEQRAAVI 375
            +K   + N    +     ++F   +  A  L+  + K  G +   +  E    +R  ++
Sbjct: 430 KKKLFEILN-DKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNIL 488

Query: 376 ERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKR 435
           +   EG  +V+V+T V  RG+D+  V +V+NFD+P   D       Y+H+IGR GR G+ 
Sbjct: 489 KGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMD------EYVHQIGRVGRLGQN 542

Query: 436 GLAVNMVDS 444
           G A+  +++
Sbjct: 543 GTAITFINN 551


>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
           [Homo sapiens]
          Length = 406

 Score =  139 bits (349), Expect = 7e-33
 Identities = 100/386 (25%), Positives = 189/386 (48%), Gaps = 65/386 (16%)

Query: 91  KSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
           K+F++L +   L +    +G+ +P+KIQ  A+P+ L    +++I  +++G+GKT AF L 
Sbjct: 24  KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQG--RDIIGLAETGSGKTGAFALP 81

Query: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG-NKLERGQKIS 209
           +L+ +  + +    L L+PT ELA Q  +  E +G     ++ A  V G + + +   ++
Sbjct: 82  ILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALA 140

Query: 210 EQ--IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
           ++  I+I TPG ++D     K  + + +K  V+DEAD  I     + +  +I +++PR+ 
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEAD-RILNMDFETEVDKILKVIPRDR 199

Query: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 327
           +  LFSAT    V K  +  + +P    +  + +T++ ++QYY+   S   KF++     
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPS---KFKS----- 251

Query: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
                                                     +R   + +F+     +L+
Sbjct: 252 ------------------------------------------KRLGSLNKFKAKARSILL 269

Query: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
            T+V +RG+D+  V VV+NFD+P        ++ Y+HR+GRT R G+ G A+  V +++ 
Sbjct: 270 ATDVASRGLDIPHVDVVVNFDIPT------HSKDYIHRVGRTARAGRSGKAITFV-TQYD 322

Query: 448 MNILNRIQEHFNKKIERLDTDDLDEI 473
           + +  RI+    KK+    T D DE+
Sbjct: 323 VELFQRIEHLIGKKLPGFPTQD-DEV 347


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score =  138 bits (348), Expect = 1e-32
 Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 29/372 (7%)

Query: 89  SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFV 148
           ++ +FEE  L   L   +   G+ + + +Q+ ++P++LA   ++L+A +Q+G+GKTAAF+
Sbjct: 286 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAG--RDLMACAQTGSGKTAAFL 343

Query: 149 LAMLSRVE----PSDRY-----PQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG 199
           L +L+ +      + R+     P+C+ ++PT EL  Q   +  +  KF     +   V  
Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQ---IYLEARKFSFGTCVRAVVIY 400

Query: 200 NKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQ-GHQ 253
              + G  I +      I+  TPG ++D   K K I  K+IK  VLDEAD M+    G +
Sbjct: 401 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLDMGFGPE 459

Query: 254 DQSIRIQRMLP--RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYV 311
            + +     +P     Q L+FSATF + + + A + +    +     +        Q  V
Sbjct: 460 MKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTV 519

Query: 312 LCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQR 371
           L   +  K + L  +   I   + M+F  T+K A ++A  L +E      + G+    +R
Sbjct: 520 LQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRER 579

Query: 372 AAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGR 431
              +  FR GK  VLV T+V ARG+D+E V  VINFDLP   D       Y+HRIGRTGR
Sbjct: 580 EQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTID------EYVHRIGRTGR 633

Query: 432 FGKRGLAVNMVD 443
            G  G A++  D
Sbjct: 634 CGNTGRAISFFD 645


>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
           [Homo sapiens]
          Length = 724

 Score =  138 bits (348), Expect = 1e-32
 Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 29/372 (7%)

Query: 89  SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFV 148
           ++ +FEE  L   L   +   G+ + + +Q+ ++P++LA   ++L+A +Q+G+GKTAAF+
Sbjct: 286 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAG--RDLMACAQTGSGKTAAFL 343

Query: 149 LAMLSRVE----PSDRY-----PQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG 199
           L +L+ +      + R+     P+C+ ++PT EL  Q   +  +  KF     +   V  
Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQ---IYLEARKFSFGTCVRAVVIY 400

Query: 200 NKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQ-GHQ 253
              + G  I +      I+  TPG ++D   K K I  K+IK  VLDEAD M+    G +
Sbjct: 401 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLDMGFGPE 459

Query: 254 DQSIRIQRMLP--RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYV 311
            + +     +P     Q L+FSATF + + + A + +    +     +        Q  V
Sbjct: 460 MKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTV 519

Query: 312 LCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQR 371
           L   +  K + L  +   I   + M+F  T+K A ++A  L +E      + G+    +R
Sbjct: 520 LQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRER 579

Query: 372 AAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGR 431
              +  FR GK  VLV T+V ARG+D+E V  VINFDLP   D       Y+HRIGRTGR
Sbjct: 580 EQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTID------EYVHRIGRTGR 633

Query: 432 FGKRGLAVNMVD 443
            G  G A++  D
Sbjct: 634 CGNTGRAISFFD 645


>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
           [Homo sapiens]
          Length = 690

 Score =  138 bits (348), Expect = 1e-32
 Identities = 115/372 (30%), Positives = 185/372 (49%), Gaps = 29/372 (7%)

Query: 89  SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFV 148
           ++ +FEE  L   L   +   G+ + + +Q+ ++P++LA   ++L+A +Q+G+GKTAAF+
Sbjct: 252 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAG--RDLMACAQTGSGKTAAFL 309

Query: 149 LAMLSRVE----PSDRY-----PQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRG 199
           L +L+ +      + R+     P+C+ ++PT EL  Q   +  +  KF     +   V  
Sbjct: 310 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQ---IYLEARKFSFGTCVRAVVIY 366

Query: 200 NKLERGQKISE-----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQ-GHQ 253
              + G  I +      I+  TPG ++D   K K I  K+IK  VLDEAD M+    G +
Sbjct: 367 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLDMGFGPE 425

Query: 254 DQSIRIQRMLP--RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYV 311
            + +     +P     Q L+FSATF + + + A + +    +     +        Q  V
Sbjct: 426 MKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTV 485

Query: 312 LCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQR 371
           L   +  K + L  +   I   + M+F  T+K A ++A  L +E      + G+    +R
Sbjct: 486 LQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRER 545

Query: 372 AAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGR 431
              +  FR GK  VLV T+V ARG+D+E V  VINFDLP   D       Y+HRIGRTGR
Sbjct: 546 EQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTID------EYVHRIGRTGR 599

Query: 432 FGKRGLAVNMVD 443
            G  G A++  D
Sbjct: 600 CGNTGRAISFFD 611


>gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo
           sapiens]
          Length = 599

 Score =  137 bits (345), Expect = 2e-32
 Identities = 121/461 (26%), Positives = 217/461 (47%), Gaps = 36/461 (7%)

Query: 8   LAVDEQEAAVKSMTNLQIKEEKVKADTNGIIKTSTTAEKTDEEEKEDRAAQSLLNKLIRS 67
           +A  E+ A ++ M++++ K E  K       ++  T+ K +   KE            + 
Sbjct: 97  IASQEEGATIQWMSSVEAKIEDKKVQR----ESKLTSGKLENLRKE------------KI 140

Query: 68  NLVDNTNQVEVLQRDPNSPLYSVKSFE-ELRLKPQLLQGVYAMGFNRPSKIQENALPMML 126
           N + N +++ V   D   P+ + +  + E ++  +LLQ +   GF  P+ IQ  A+P+ML
Sbjct: 141 NFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVML 200

Query: 127 AEPPQNLIAQSQSGTGKTAAFVLAMLSRV-EPSDRYPQCLCLSPTYELALQTGKVIEQMG 185
               + L+A + +G+GKT AF + +L ++ +P+++  + L +SPT ELA Q  + + ++ 
Sbjct: 201 HG--RELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 258

Query: 186 K---FYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSK-LKFIDPKKIKVFVLD 241
           +   F   +    AV   K          I++ TP  ++    +    ID   ++  V+D
Sbjct: 259 EGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVD 318

Query: 242 EADVMI--ATQGHQDQSIRI-QRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKR 298
           E+D +      G +DQ   I         +  +FSATF   V ++ +  + +   + +  
Sbjct: 319 ESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGA 378

Query: 299 EEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQ 358
               ++T++Q  +   S   K  A+  L         ++F  + + A  L  EL  EG  
Sbjct: 379 RNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGIN 438

Query: 359 VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD 418
           V ++  E   +QR   +  FR GK  VL+ T + ARGID + V++VIN+D P        
Sbjct: 439 VDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPT------S 492

Query: 419 NETYLHRIGRTGRFGKRGLAVNMV---DSKHSMNILNRIQE 456
           +  Y+HRIGRTGR G +G A+      D     ++ N IQ+
Sbjct: 493 SVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQ 533


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score =  137 bits (344), Expect = 3e-32
 Identities = 107/382 (28%), Positives = 190/382 (49%), Gaps = 34/382 (8%)

Query: 100 PQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFV------LAMLS 153
           P++++ +   GF +P+ IQ  A P++L     +LI  +Q+GTGKT  ++      L +  
Sbjct: 251 PEVMENIKKAGFQKPTPIQSQAWPIVLQGI--DLIGVAQTGTGKTLCYLMPGFIHLVLQP 308

Query: 154 RVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKF-YPELKLAYAVRGNKLERGQKISE-- 210
            ++     P  L L+PT ELALQ   V  +  K+ Y  L+      G    R ++I E  
Sbjct: 309 SLKGQRNRPGMLVLTPTRELALQ---VEGECCKYSYKGLRSVCVYGGGN--RDEQIEELK 363

Query: 211 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
               I+I TPG + D      F++ K I   VLDEAD M+   G + Q ++I   +  + 
Sbjct: 364 KGVDIIIATPGRLND-LQMSNFVNLKNITYLVLDEADKML-DMGFEPQIMKILLDVRPDR 421

Query: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREE-ETLDTIKQYYVLCSSRDEKFQALCNL 326
           Q ++ SAT+  SV + AQ  + +P ++ +   +   + ++KQ  ++ +  ++       L
Sbjct: 422 QTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFL 481

Query: 327 YGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVL 386
               +  + ++F   +  A  L+++L      V  L G+     R   +E F+ GK ++L
Sbjct: 482 QSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRIL 541

Query: 387 VTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVD--- 443
           + T++ +RG+DV  V+ V NFD P       + E Y+HRIGRTGR G+ G+++  +    
Sbjct: 542 IATDLASRGLDVHDVTHVYNFDFP------RNIEEYVHRIGRTGRAGRTGVSITTLTRND 595

Query: 444 ---SKHSMNILNRIQEHFNKKI 462
              +   +NIL R  +   +++
Sbjct: 596 WRVASELINILERANQSIPEEL 617


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,882,442
Number of Sequences: 37866
Number of extensions: 723173
Number of successful extensions: 2790
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 2530
Number of HSP's gapped (non-prelim): 144
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.