Guide to the Human Genome
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Name: ARL6 Sequence: fasta or formatted (186aa) NCBI GI: 14149815
Description:

ADP-ribosylation factor-like 6

Referenced in:

ADP-Ribosylation Factors
Planar Cell Polarity

Other entries for this name:
alt mRNA [186aa] ADP-ribosylation factor-like 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          7           1
 C cysteine            1.6          3           1
 D aspartate           7.0         13           1
 E glutamate           4.8          9           2
 F phenylalanine       3.8          7           2
 G glycine             5.9         11           1
 H histidine           2.7          5           1
 I isoleucine          8.1         15           2
 K lysine              9.1         17           3
 L leucine            12.9         24           2
 M methionine          2.2          4           1
 N asparagine          4.3          8           1
 P proline             2.7          5           1
 Q glutamine           4.8          9           1
 R arginine            4.3          8           2
 S serine              8.1         15           3
 T threonine           4.3          8           2
 V valine              6.5         12           2
 W tryptophan          1.6          3           1
 Y tyrosine            1.6          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 6 
ARL6                  1.000   ADP-ribosylation factor-like 6 
ARF1                  0.336   ADP-ribosylation factor 1 
ARF1                  0.336   ADP-ribosylation factor 1 
ARF1                  0.336   ADP-ribosylation factor 1 
ARF1                  0.336   ADP-ribosylation factor 1 
ARF3                  0.336   ADP-ribosylation factor 3 
ARF6                  0.313   ADP-ribosylation factor 6 
ARF4                  0.307   ADP-ribosylation factor 4 
ARF5                  0.302   ADP-ribosylation factor 5 
ARL5B                 0.299   ADP-ribosylation factor-like 8 
TRIM23                0.299   ADP-ribosylation factor domain protein 1 isoform alph...
ARL3                  0.296   ADP-ribosylation factor-like 3 
ARL5A                 0.290   ADP-ribosylation factor-like 5A isoform 1 
ARL1                  0.284   ADP-ribosylation factor-like 1 
ARL2                  0.270   ADP-ribosylation factor-like 2 
ARL4A                 0.256   ADP-ribosylation factor-like 4A 
ARL4A                 0.256   ADP-ribosylation factor-like 4A 
ARL4A                 0.256   ADP-ribosylation factor-like 4A 
ARL5A                 0.247   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.247   ADP-ribosylation factor-like 5A isoform 2 
TRIM23                0.244   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.236   ADP-ribosylation factor domain protein 1 isoform gam...
ARL11                 0.236   ADP-ribosylation factor-like 11 
ARL5C                 0.230   ADP-ribosylation factor-like 5C 
ARL14                 0.224   ADP-ribosylation factor-like 14 
ARL13B                0.218   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
SAR1A                 0.216   SAR1a gene homolog 1 
SAR1A                 0.216   SAR1a gene homolog 1 
ARL4C                 0.213   ADP-ribosylation factor-like 4C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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