Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARL10 Sequence: fasta or formatted (244aa) NCBI GI: 27734809
Description:

ADP-ribosylation factor-like 10

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         20           3
 C cysteine            0.0          0           0
 D aspartate           6.6         16           1
 E glutamate          11.1         27           2
 F phenylalanine       4.1         10           1
 G glycine             8.2         20           2
 H histidine           1.2          3           1
 I isoleucine          2.5          6           1
 K lysine              3.7          9           1
 L leucine            15.6         38           3
 M methionine          1.2          3           1
 N asparagine          1.6          4           1
 P proline             6.6         16           2
 Q glutamine           2.9          7           1
 R arginine            6.6         16           2
 S serine              4.5         11           1
 T threonine           2.5          6           1
 V valine              8.2         20           4
 W tryptophan          4.1         10           2
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 10 
ARL3                  0.150   ADP-ribosylation factor-like 3 
ARL1                  0.144   ADP-ribosylation factor-like 1 
ARL2                  0.142   ADP-ribosylation factor-like 2 
ARL8B                 0.142   ADP-ribosylation factor-like 10C 
ARF6                  0.142   ADP-ribosylation factor 6 
ARL9                  0.140   ADP-ribosylation factor-like 9 
ARL8A                 0.140   ADP-ribosylation factor-like 8A 
ARF4                  0.131   ADP-ribosylation factor 4 
ARF1                  0.131   ADP-ribosylation factor 1 
ARF1                  0.131   ADP-ribosylation factor 1 
ARF1                  0.131   ADP-ribosylation factor 1 
ARF1                  0.131   ADP-ribosylation factor 1 
ARF3                  0.131   ADP-ribosylation factor 3 
ARF5                  0.129   ADP-ribosylation factor 5 
ARL4A                 0.125   ADP-ribosylation factor-like 4A 
ARL4A                 0.125   ADP-ribosylation factor-like 4A 
ARL4A                 0.125   ADP-ribosylation factor-like 4A 
ARL4D                 0.125   ADP-ribosylation factor-like 4D 
ARL11                 0.123   ADP-ribosylation factor-like 11 
TRIM23                0.121   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.119   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.119   ADP-ribosylation factor domain protein 1 isoform alph...
ARL4C                 0.117   ADP-ribosylation factor-like 4C 
ARL13B                0.114   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
ARL14                 0.112   ADP-ribosylation factor-like 14 
ARL5A                 0.108   ADP-ribosylation factor-like 5A isoform 1 
ARL5B                 0.106   ADP-ribosylation factor-like 8 
ARL6                  0.104   ADP-ribosylation factor-like 6 
ARL6                  0.104   ADP-ribosylation factor-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press