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Search of human proteins with 8922313
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922313 G patch domain containing 2 [Homo sapiens]
(528 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922313 G patch domain containing 2 [Homo sapiens] 1093 0.0
gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens] 229 5e-60
gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens] 214 2e-55
gi|5032031 RNA binding motif protein 5 [Homo sapiens] 61 2e-09
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens] 57 3e-08
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens] 57 3e-08
gi|63003897 transcription factor NRF [Homo sapiens] 55 2e-07
gi|39725952 angiogenic factor VG5Q [Homo sapiens] 51 2e-06
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 50 7e-06
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 50 7e-06
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 50 7e-06
gi|15811782 G patch domain and KOW motifs [Homo sapiens] 47 4e-05
gi|56788356 tuftelin interacting protein 11 [Homo sapiens] 45 2e-04
gi|8393259 tuftelin interacting protein 11 [Homo sapiens] 45 2e-04
gi|33469964 splicing factor 4 [Homo sapiens] 43 6e-04
gi|50962882 G patch domain containing 8 [Homo sapiens] 43 6e-04
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 43 8e-04
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 42 0.002
gi|148747556 PIN2-interacting protein 1 [Homo sapiens] 41 0.002
gi|148806888 hypothetical protein LOC339512 [Homo sapiens] 41 0.002
gi|133925795 zinc finger, CCCH-type with G patch domain isoform ... 40 0.007
gi|133925793 zinc finger, CCCH-type with G patch domain isoform ... 40 0.007
gi|133925791 zinc finger, CCCH-type with G patch domain isoform ... 40 0.007
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 40 0.007
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 40 0.007
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 39 0.015
gi|87299628 biorientation of chromosomes in cell division 1-like... 37 0.045
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 37 0.045
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 37 0.045
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 36 0.076
>gi|8922313 G patch domain containing 2 [Homo sapiens]
Length = 528
Score = 1093 bits (2826), Expect = 0.0
Identities = 528/528 (100%), Positives = 528/528 (100%)
Query: 1 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP 60
MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP
Sbjct: 1 MFGAAGRQPIGAPAAGNSWHFSRTMEELVHDLVSALEESSEQARGGFAETGDHSRSISCP 60
Query: 61 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ 120
LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ
Sbjct: 61 LKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQ 120
Query: 121 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT 180
MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT
Sbjct: 121 MLVAKRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRT 180
Query: 181 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK 240
MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK
Sbjct: 181 MTQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNK 240
Query: 241 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG 300
DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG
Sbjct: 241 DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITG 300
Query: 301 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG 360
VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG
Sbjct: 301 VVPWWEKEDPTELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSG 360
Query: 361 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS 420
GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS
Sbjct: 361 GTPTSMVPIPGPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCS 420
Query: 421 VRTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGW 480
VRTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGW
Sbjct: 421 VRTASRQTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGW 480
Query: 481 TPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA 528
TPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA
Sbjct: 481 TPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTTPNAGKSA 528
>gi|40018644 hypothetical protein LOC55668 isoform 2 [Homo sapiens]
Length = 477
Score = 229 bits (584), Expect = 5e-60
Identities = 163/436 (37%), Positives = 232/436 (53%), Gaps = 39/436 (8%)
Query: 25 MEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWET 84
M+ELVHDL SALE++SEQ + G E + +RQ RKRRGRKRRS + H E
Sbjct: 1 MDELVHDLASALEQTSEQNKLG--ELWEEMALSPRQQRRQLRKRRGRKRRS-DFTHLAEH 57
Query: 85 GHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWH 144
C SE S+SSL+E +KD RE + SDSDD M VAKR P+ LN V+ K+ WH
Sbjct: 58 TCCYSEASESSLDEATKDCREVAPVT--NFSDSDDTM-VAKRHPA--LNAIVKSKQHSWH 112
Query: 145 ESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEF 204
ESD +N R LRRRRKVKR+ ++ + K ++ D +R +++
Sbjct: 113 ESDSFTENAPCRPLRRRRKVKRVTSEVAASLQQKLKVS---------DWSYERGCRFKS- 162
Query: 205 TKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQT------NKDKMECE--EQKV-SDELM 255
KK++L ++ G L N+T K++MECE EQK SDE M
Sbjct: 163 ----AKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENM 218
Query: 256 SESDSSSL-SSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVVPWWEKEDPTELD 314
SE ++SS+ SS+D GLFTNDEGRQGDDEQSDWFYE E + ++P W + +E++
Sbjct: 219 SECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVE 278
Query: 315 KNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIPGPVG 374
+ D + +F L S P++RG+ RL+RL G +++ ++K +G
Sbjct: 279 R--MDSGLDKFSDSTFLLPSRPAQRGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLG 336
Query: 375 NKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLR-----DNRAERGHKKNCSVRTASRQTS 429
+R+ H D D W + E +Q L D A+ H++ ++RQ +
Sbjct: 337 TERISHIISDPRQKDFWLPSAGKRERNQFNPLSPLYSLDVLADASHRRCSPAHCSARQAN 396
Query: 430 MHLGSLCTGDIKRRRK 445
+H G C+ DIKR+RK
Sbjct: 397 VHWGPPCSRDIKRKRK 412
>gi|40018646 hypothetical protein LOC55668 isoform 1 [Homo sapiens]
Length = 482
Score = 214 bits (544), Expect = 2e-55
Identities = 161/441 (36%), Positives = 232/441 (52%), Gaps = 44/441 (9%)
Query: 25 MEELVHDLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWET 84
M+ELVHDL SALE++SEQ + G E + +RQ RKRRGRKRRS + H E
Sbjct: 1 MDELVHDLASALEQTSEQNKLG--ELWEEMALSPRQQRRQLRKRRGRKRRS-DFTHLAEH 57
Query: 85 GHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWH 144
C SE S+SSL+E +KD RE + SDSDD M VAKR P+ LN V+ K+ WH
Sbjct: 58 TCCYSEASESSLDEATKDCREVAPVT--NFSDSDDTM-VAKRHPA--LNAIVKSKQHSWH 112
Query: 145 ESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEF 204
ESD +N R LRRRRKVKR+ ++ + K ++ D +R +++
Sbjct: 113 ESDSFTENAPCRPLRRRRKVKRVTSEVAASLQQKLKVS---------DWSYERGCRFKS- 162
Query: 205 TKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQT------NKDKMECE--EQKV-SDELM 255
KK++L ++ G L N+T K++MECE EQK SDE M
Sbjct: 163 ----AKKQRLSRWKENTPWTSSGHGLCESAENRTFLSKTGRKERMECETDEQKQGSDENM 218
Query: 256 SESDSSSL-SSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACGITGVVPWWEKEDPTELD 314
SE ++SS+ SS+D GLFTNDEGRQGDDEQSDWFYE E + ++P W + +E++
Sbjct: 219 SECETSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVPGFTVPNLLPKWAPDHCSEVE 278
Query: 315 KNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIPGPVG 374
+ D + +F L S P++RG+ RL+RL G +++ ++K +G
Sbjct: 279 R--MDSGLDKFSDSTFLLPSRPAQRGYHTRLNRLPGAAARCLRKGRRRLVGKETSINTLG 336
Query: 375 NKRMVHFSPDSHHHD------HWFSPGARTEHDQHQL----LRDNRAERGHKKNCSVRTA 424
+R+ H D + F + H+ + L D A+ H++ +
Sbjct: 337 TERISHIISDPRQKEKNKALASDFPHISACAHEFNPLSPLYSLDVLADASHRRCSPAHCS 396
Query: 425 SRQTSMHLGSLCTGDIKRRRK 445
+RQ ++H G C+ DIKR+RK
Sbjct: 397 ARQANVHWGPPCSRDIKRKRK 417
>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
Length = 815
Score = 61.2 bits (147), Expect = 2e-09
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 405 LLRDNRAERGHKKNCSVRTASRQTSMHLGSL--CTGDIKRRRKAAP------LPGPT--- 453
L+R + HK+N + SR + L +L ++K R +AA +P P
Sbjct: 662 LVRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPK 721
Query: 454 --------TAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKG 505
T + I +NIGN+MLQ MGW GSGLGR +GI+ PI+A R KG
Sbjct: 722 RKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKG 781
Query: 506 LGLG 509
GLG
Sbjct: 782 AGLG 785
>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
Length = 930
Score = 57.4 bits (137), Expect = 3e-08
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 405 LLRDNRAERGHKKNCSVRTASRQTSMHLGSLCTGDIKR---------RRKAAPLPGP--- 452
L+R + HK+N + + + L +L D+++ RR+ +P P
Sbjct: 774 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 833
Query: 453 ----------TTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQR 502
+ F + +NIG+RMLQ MGW GSGLGR +GI PI+A R
Sbjct: 834 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 893
Query: 503 PKGLGLG 509
+G GLG
Sbjct: 894 VRGSGLG 900
>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
Length = 852
Score = 57.4 bits (137), Expect = 3e-08
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 405 LLRDNRAERGHKKNCSVRTASRQTSMHLGSLCTGDIKR---------RRKAAPLPGP--- 452
L+R + HK+N + + + L +L D+++ RR+ +P P
Sbjct: 696 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 755
Query: 453 ----------TTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQR 502
+ F + +NIG+RMLQ MGW GSGLGR +GI PI+A R
Sbjct: 756 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 815
Query: 503 PKGLGLG 509
+G GLG
Sbjct: 816 VRGSGLG 822
>gi|63003897 transcription factor NRF [Homo sapiens]
Length = 690
Score = 54.7 bits (130), Expect = 2e-07
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 463 QPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPK 514
Q I E+NIGN++L+ MGWT G GLG+ G+GI EPI ++ K GLG + +
Sbjct: 547 QQIKEDNIGNQLLRKMGWT-GGGLGKSGEGIREPISVKEQHKREGLGLDVER 597
>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
Length = 714
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 465 ILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKS 515
I ++N G +ML+ MGW G GLG+DG G+ PIQ R GLG P S
Sbjct: 617 ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGTGKPSS 667
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 49.7 bits (117), Expect = 7e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 463 QPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
Q + + N+G +MLQ MGW G GLG GKGI EP+ +G GLG
Sbjct: 1007 QKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLG 1053
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 49.7 bits (117), Expect = 7e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 463 QPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
Q + + N+G +MLQ MGW G GLG GKGI EP+ +G GLG
Sbjct: 1007 QKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLG 1053
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 49.7 bits (117), Expect = 7e-06
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 413 RGHKKNCSVRTASR-QTSMHLGSLCTGDIKRRRKAAPLPGPTTAGFVGENAQPIL----- 466
R ++ S R+ SR Q+ S G +R R +P P P++AG +A PI
Sbjct: 782 RSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTP-PSSAGLGSNSAPPIPDSRLG 840
Query: 467 ENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQA------MQRPKGLGLGFPLP 513
E N G++ML MGW+ GLG +GI +PI+ + KG+G+ P
Sbjct: 841 EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDP 893
>gi|15811782 G patch domain and KOW motifs [Homo sapiens]
Length = 476
Score = 47.0 bits (110), Expect = 4e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 471 GNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLGFPLPKSTSATTT 521
G ML+ MGW PG G+GR + +P RPKGLGLG L ++ + T T
Sbjct: 168 GLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTPT 218
>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 470 IGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLG 507
IG ++LQ MG+ PG GLG++ +GI PI+A QR KG G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR-KGKG 188
>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 45.1 bits (105), Expect = 2e-04
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 470 IGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLG 507
IG ++LQ MG+ PG GLG++ +GI PI+A QR KG G
Sbjct: 152 IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR-KGKG 188
>gi|33469964 splicing factor 4 [Homo sapiens]
Length = 645
Score = 43.1 bits (100), Expect = 6e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 469 NIGNRMLQNMGWTPGSGLGRDGKGISEPI-QAMQRPKGLGLGFPLPKSTS 517
NIG +ML MGW G GLG +G+GI P+ + G G G P S
Sbjct: 564 NIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPAELS 613
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 43.1 bits (100), Expect = 6e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 463 QPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGLG 509
+PI +NIG+R+LQ GW G GLG+ +G ++PI + + +G+G
Sbjct: 36 KPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 42.7 bits (99), Expect = 8e-04
Identities = 62/289 (21%), Positives = 112/289 (38%), Gaps = 48/289 (16%)
Query: 31 DLVSALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSE 90
D S E+SS QA E + K++ K RG ++ P L E
Sbjct: 806 DYSSDSEQSSVQATQSAQEKEKQGQMERTHNKQE--KNRGEEKSKSERECPHSKKRTLKE 863
Query: 91 GSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAV 150
L SK R+N+ +K D S+S+ + V K + + ++ + + +S+ V
Sbjct: 864 NLSDHLRNGSKPKRKNYAGSKWD-SESNSERDVTKNSKNDSHPSSDKEEGEATSDSESEV 922
Query: 151 DNVGNRTLRRRRKVKRMAVDLPQD-----ISNKRTMTQPPEG-CRDQDMDSDRAYQYQEF 204
+ + + LP D S +RT T EG C + + + + +++
Sbjct: 923 SEIHIKVKPTTKSSTN--TSLPDDNGAWKSSKQRTSTSDSEGSCSNSENNRGKPQKHKHG 980
Query: 205 TKNKVKKRKLKIIRQ-----------GPK--------------------IQDEGVVLESE 233
+K +K+ K +++ PK I D+ V ES+
Sbjct: 981 SKENLKREHTKKVKEKLKGKKDKKHKAPKRKQAFHWQPPLEFGEEEEEEIDDKQVTQESK 1040
Query: 234 -----ETNQTNKDKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGR 277
E N+T KD + E+ ++L + D+ ++SS D FT D+ +
Sbjct: 1041 EKKVSENNETIKDNILKTEKSSEEDLSGKHDTVTVSS-DLDQFTKDDSK 1088
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 41.6 bits (96), Expect = 0.002
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 55/303 (18%)
Query: 34 SALEESSEQARGGFAETGDHSRSISCPLKRQARKRRGRK--RRSYNVHHPWETGHCLSEG 91
S+ +E EQ + + G +S S+ P +K G + +++ P E+ S+
Sbjct: 270 SSSDEEEEQKKPMKNKPGPYS-SVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDE 328
Query: 92 SDSSLEE------------------PSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLN 133
SDSS EE P+K E+ +++ S DD+ A +P+
Sbjct: 329 SDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDE---APSKPAGTTK 385
Query: 134 NN-----VRGKRPLWHESDFAVDNVGN--RTLRRR---------------RKVKRMAVDL 171
N+ V K P + VG + L R+ K K+M
Sbjct: 386 NSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATT 445
Query: 172 PQDISNKRTMTQP----PEGCRDQDMDSDRAYQYQE---FTKNKVKKRKLKII-RQGPKI 223
+ K ++ P P+G RD DSD + +E +K+ VKK+ K+ P
Sbjct: 446 KPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSK 505
Query: 224 QDEGVVLESEETNQTNK-DKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGDDE 282
++E +N ++ D E EE+K+ + + + T A N + + +E
Sbjct: 506 PASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEE 565
Query: 283 QSD 285
+ +
Sbjct: 566 EEE 568
>gi|148747556 PIN2-interacting protein 1 [Homo sapiens]
Length = 328
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 441 KRRRKAAPLPGPTTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAM 500
+RRRK P + ++++ G RML+ MGW+ G GLG +G ++ I+
Sbjct: 6 ERRRKQKWAVDPQNTAWSNDDSK------FGQRMLEKMGWSKGKGLGAQEQGATDHIKVQ 59
Query: 501 QRPKGLGLG 509
+ LGLG
Sbjct: 60 VKNNHLGLG 68
>gi|148806888 hypothetical protein LOC339512 [Homo sapiens]
Length = 302
Score = 41.2 bits (95), Expect = 0.002
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 125 KRRPSSNLNNNVRGKRPLWHESDFAVDNVGNRTLRRRRKVKRM---AVDLPQDISNKRTM 181
K++ SS L N + KRP D V + R R + K+M A + QD ++
Sbjct: 67 KKKFSSYLGNGFQ-KRP----EDVLVFSPQGRQKHRAPQAKKMRALATRMAQDTCKSKSQ 121
Query: 182 TQPPEGCRDQDMDSDRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNKD 241
P D + + Q ++N R I++ P+ Q++ V S++ + +
Sbjct: 122 VPPSH---DAGLKDPMKSKKQPLSQNN---RTACFIKEQPQAQEKDSVNPSKDVDPSKGI 175
Query: 242 KMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGD 280
+ C+ Q+VS + + SSS +S D+G+ DE R D
Sbjct: 176 SVPCQNQEVSTNTIEQGPSSSPAS-DSGMACADETRSKD 213
>gi|133925795 zinc finger, CCCH-type with G patch domain isoform c
[Homo sapiens]
Length = 511
Score = 39.7 bits (91), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 470 IGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGL 508
IG+R+L MG+ G GLGR +G EPI A+ P+G L
Sbjct: 316 IGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSL 354
>gi|133925793 zinc finger, CCCH-type with G patch domain isoform a
[Homo sapiens]
Length = 531
Score = 39.7 bits (91), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 470 IGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGL 508
IG+R+L MG+ G GLGR +G EPI A+ P+G L
Sbjct: 336 IGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSL 374
>gi|133925791 zinc finger, CCCH-type with G patch domain isoform c
[Homo sapiens]
Length = 511
Score = 39.7 bits (91), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 470 IGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQRPKGLGL 508
IG+R+L MG+ G GLGR +G EPI A+ P+G L
Sbjct: 316 IGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSL 354
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 39.7 bits (91), Expect = 0.007
Identities = 58/292 (19%), Positives = 110/292 (37%), Gaps = 49/292 (16%)
Query: 38 ESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLE 97
+ E RG +GD R P+K++ RK RGR S + P ++ LE
Sbjct: 358 DRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEP-----------EAELE 406
Query: 98 EPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVD------ 151
+K + ++ + + Q R V+ +R F++D
Sbjct: 407 REAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKK 466
Query: 152 ---NVGNRTLRRRRKVK-RMAVDLP---------QDISNKRTMTQPPEGCRD--QDMDSD 196
+V + + ++K + VD P +++ + +Q + D +
Sbjct: 467 KEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKI 526
Query: 197 RAYQYQEFTKNKVKK--RKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDEL 254
R Y+ + K + +LK GPKI+ ++ N+ +K + EE+ +EL
Sbjct: 527 RRYKANKDVMEKAAEVYTRLKSRVLGPKIE------AVQKVNKAGMEKEKAEEKLAGEEL 580
Query: 255 MSES---------DSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACG 297
E S+ LS+ G T+ +G +D++ + + E G CG
Sbjct: 581 AGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCG 632
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 39.7 bits (91), Expect = 0.007
Identities = 58/292 (19%), Positives = 110/292 (37%), Gaps = 49/292 (16%)
Query: 38 ESSEQARGGFAETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLE 97
+ E RG +GD R P+K++ RK RGR S + P ++ LE
Sbjct: 358 DRGEAERGSGGSSGDELREDDEPVKKRGRKGRGRGPPSSSDSEP-----------EAELE 406
Query: 98 EPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWHESDFAVD------ 151
+K + ++ + + Q R V+ +R F++D
Sbjct: 407 REAKKSAKKPQSSSTEPARKPGQKEKRVRPEEKQQAKPVKVERTRKRSEGFSMDRKVEKK 466
Query: 152 ---NVGNRTLRRRRKVK-RMAVDLP---------QDISNKRTMTQPPEGCRD--QDMDSD 196
+V + + ++K + VD P +++ + +Q + D +
Sbjct: 467 KEPSVEEKLQKLHSEIKFALKVDSPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKI 526
Query: 197 RAYQYQEFTKNKVKK--RKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDEL 254
R Y+ + K + +LK GPKI+ ++ N+ +K + EE+ +EL
Sbjct: 527 RRYKANKDVMEKAAEVYTRLKSRVLGPKIE------AVQKVNKAGMEKEKAEEKLAGEEL 580
Query: 255 MSES---------DSSSLSSTDAGLFTNDEGRQGDDEQSDWFYEKESGGACG 297
E S+ LS+ G T+ +G +D++ + + E G CG
Sbjct: 581 AGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRDSEEGPRCG 632
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 38.5 bits (88), Expect = 0.015
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 221 PKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSSLSSTDAGLFTNDEGRQGD 280
P +D E EE + +D+ E +E SD+ SESDS+S S T+ +D+ + D
Sbjct: 599 PSSKDSEDSNEDEEEDDEEEDE-EDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQD 657
Query: 281 DEQSDWFYEKES 292
+ SD EK S
Sbjct: 658 ESDSDTEGEKTS 669
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 37.0 bits (84), Expect = 0.045
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 89 SEGSDSSLEEPSKDYRENHNNN----KKDHSDSDDQMLVAKRRPSSNLNNNVRGKRPLWH 144
++ SDSS E +K R + + K +SDSDD++ V +RR S R R +
Sbjct: 453 TQTSDSS-EGKTKSVRHAYVHKPYLYSKYYSDSDDELTVEQRRQSIAKEKEERLLRRQIN 511
Query: 145 ESDFAVDNVGNRTLRRRRKVK---RMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQY 201
+ K K R +VDL + T + P+ R +++ +R
Sbjct: 512 REKLEEKRKQKAEKTKSSKTKGQGRSSVDLEE----SSTKSLEPKAARIKEVLKERKVLE 567
Query: 202 QEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVS 251
++ +K +K+ + + + K + + E++ +T K CE++K+S
Sbjct: 568 KKVALSKKRKKDSRNVEENSKKKQQ----YEEDSKETLKTSEHCEKEKIS 613
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 37.0 bits (84), Expect = 0.045
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 35/244 (14%)
Query: 49 ETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHN 108
E + S S +K++ K +G+ RR TG +EGS S+L + + +
Sbjct: 1196 EPSEKLESTSSKVKQE--KVKGKVRRKV-------TG---TEGSSSTLVDYTSTSSTGGS 1243
Query: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNN---------VRGKRPLWHESDFAVDNVGNRTLR 159
+K +D + V K N +N ++ + W + DF + ++ +
Sbjct: 1244 PVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQ 1303
Query: 160 RRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEFTKN--------KVKK 211
V + A + K T+P + + +S+ + + Q+FTK+ +VK
Sbjct: 1304 PISSVGKPASVI------KNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKS 1357
Query: 212 RKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSSLSSTDAGLF 271
K + K +D + +E + K+ + E++ D L + + SLS +
Sbjct: 1358 SKNSASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEAR 1417
Query: 272 TNDE 275
T+D+
Sbjct: 1418 TSDK 1421
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 37.0 bits (84), Expect = 0.045
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 35/244 (14%)
Query: 49 ETGDHSRSISCPLKRQARKRRGRKRRSYNVHHPWETGHCLSEGSDSSLEEPSKDYRENHN 108
E + S S +K++ K +G+ RR TG +EGS S+L + + +
Sbjct: 1230 EPSEKLESTSSKVKQE--KVKGKVRRKV-------TG---TEGSSSTLVDYTSTSSTGGS 1277
Query: 109 NNKKDHSDSDDQMLVAKRRPSSNLNNN---------VRGKRPLWHESDFAVDNVGNRTLR 159
+K +D + V K N +N ++ + W + DF + ++ +
Sbjct: 1278 PVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQ 1337
Query: 160 RRRKVKRMAVDLPQDISNKRTMTQPPEGCRDQDMDSDRAYQYQEFTKN--------KVKK 211
V + A + K T+P + + +S+ + + Q+FTK+ +VK
Sbjct: 1338 PISSVGKPASVI------KNVSTKPSNIVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKS 1391
Query: 212 RKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQKVSDELMSESDSSSLSSTDAGLF 271
K + K +D + +E + K+ + E++ D L + + SLS +
Sbjct: 1392 SKNSASSEKGKTKDRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEAR 1451
Query: 272 TNDE 275
T+D+
Sbjct: 1452 TSDK 1455
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 36.2 bits (82), Expect = 0.076
Identities = 75/382 (19%), Positives = 140/382 (36%), Gaps = 48/382 (12%)
Query: 82 WETGHCLSEGSDSSLEEPSKDYRENHNNNKKDHSDSDDQMLVAKRRPSSNLNNNVR--GK 139
W + + + SL+ ++ N KK SD++ + ++ S + NV+ K
Sbjct: 264 WLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKS-SDAESEDSKDAKKDSKKVKKNVKKDDK 322
Query: 140 RPLWHESDFAVDNVGNRTLRRRRKVKRMAVDLPQDISNKRTMTQPP----EGCRDQDMDS 195
+ + + D + R+ K+ L +D K T P E +D +
Sbjct: 323 KKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARN 382
Query: 196 DRAYQYQEFTKNKVKKRKLKIIRQGPKIQDEGVVLESEETNQTNKDKMECEEQK--VSDE 253
D + ++ +KN KK+ K I + E ES++ + +K + + +K +DE
Sbjct: 383 D-SRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDE 441
Query: 254 LMSESDSSSLSSTDAGLFTNDEGRQG---DDEQSDWFYEKESGGACGITGVVPWWEKEDP 310
+++DS + G +G++ DD++ D ES E E
Sbjct: 442 ESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAES------------TEMESD 489
Query: 311 TELDKNVPDPVFESILTGSFPLMSHPSRRGFQARLSRLHGMSSKNIKKSGGTPTSMVPIP 370
EL K D GS + +R+ ++ + S K S I
Sbjct: 490 LELKK---DKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTS-------TKIK 539
Query: 371 GPVGNKRMVHFSPDSHHHDHWFSPGARTEHDQHQLLRDNRAERGHKKNCSVRTASRQTSM 430
G D+ + + PGA+ + D+ N G + R +S++T+
Sbjct: 540 G-----------SDTESEESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTF 588
Query: 431 HL--GSLCTGDIKRRRKAAPLP 450
+ TG + R+ PLP
Sbjct: 589 NEKGEKASTGRVPPSREKPPLP 610
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,102,435
Number of Sequences: 37866
Number of extensions: 1178183
Number of successful extensions: 3730
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 3442
Number of HSP's gapped (non-prelim): 347
length of query: 528
length of database: 18,247,518
effective HSP length: 107
effective length of query: 421
effective length of database: 14,195,856
effective search space: 5976455376
effective search space used: 5976455376
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.