Guide to the Human Genome
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Name: CYTL1 Sequence: fasta or formatted (136aa) NCBI GI: 8922108
Description:

cytokine-like 1

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6          9           2
 C cysteine            4.4          6           1
 D aspartate           7.4         10           2
 E glutamate           2.9          4           1
 F phenylalanine       2.9          4           1
 G glycine             1.5          2           1
 H histidine           0.7          1           1
 I isoleucine          2.9          4           1
 K lysine              3.7          5           1
 L leucine            15.4         21           5
 M methionine          2.2          3           1
 N asparagine          2.9          4           1
 P proline            11.0         15           2
 Q glutamine           2.9          4           1
 R arginine            9.6         13           2
 S serine              5.1          7           1
 T threonine           5.1          7           2
 V valine              7.4         10           1
 W tryptophan          0.7          1           1
 Y tyrosine            4.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytokine-like 1 
LRCH2                 0.023   leucine-rich repeats and calponin homology (CH) dom...
TGM4                  0.019   transglutaminase 4 (prostate) 
FHDC1                 0.016   FH2 domain containing 1 
SCT                   0.016   secretin preproprotein 
LRFN1                 0.012   leucine rich repeat and fibronectin type III domain...
LRFN4                 0.012   leucine rich repeat and fibronectin type III domain ...
SPTBN2                0.012   spectrin, beta, non-erythrocytic 2 
CARD10                0.012   caspase recruitment domain protein 10 
LRRC24                0.008   leucine rich repeat containing 24 
LRFN3                 0.008   leucine rich repeat and fibronectin type III domain ...
GDF1                  0.008   growth differentiation factor 1 
IL20RA                0.008   interleukin 20 receptor, alpha 
CXCL6                 0.008   chemokine (C-X-C motif) ligand 6 (granulocyte chemota...
MORC1                 0.008   MORC family CW-type zinc finger 1 
PLA2G4D               0.008   phospholipase A2, group IVD 
LOC643321             0.008   PREDICTED: similar to hCG1644292 
LOC643321             0.008   PREDICTED: similar to hCG1644292 
SECISBP2              0.008   SECIS binding protein 2 
THPO                  0.008   thrombopoietin precursor 
APOB                  0.004   apolipoprotein B precursor 
ADAMTS1               0.004   ADAM metallopeptidase with thrombospondin type 1 mot...
PRRT3                 0.004   proline-rich transmembrane protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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