COPE 25485

Name: COPE	Sequence: fasta or formatted (308aa)		NCBI GI: 31542319
Description: epsilon subunit of coatomer protein complex isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [257aa] epsilon subunit of coatomer protein complex isoform b alt prot [256aa] epsilon subunit of coatomer protein complex isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.4 35 2 C cysteine 1.3 4 1 D aspartate 7.8 24 1 E glutamate 7.1 22 1 F phenylalanine 2.9 9 1 G glycine 4.5 14 2 H histidine 2.3 7 1 I isoleucine 2.9 9 1 K lysine 4.5 14 1 L leucine 13.0 40 4 M methionine 2.6 8 1 N asparagine 2.6 8 1 P proline 4.5 14 2 Q glutamine 6.2 19 2 R arginine 5.8 18 2 S serine 6.5 20 2 T threonine 3.9 12 2 V valine 5.5 17 2 W tryptophan 0.6 2 1 Y tyrosine 3.9 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 epsilon subunit of coatomer protein complex isoform ... COPE 0.787 epsilon subunit of coatomer protein complex isoform ... COPE 0.778 epsilon subunit of coatomer protein complex isoform ... SF3A3 0.009 splicing factor 3a, subunit 3 MTL5 0.007 metallothionein-like 5, testis-specific isoform b [H... MTL5 0.007 metallothionein-like 5, testis-specific isoform a [H... TNXB 0.007 tenascin XB isoform 2 TNXB 0.007 tenascin XB isoform 1 precursor TMTC1 0.007 transmembrane and tetratricopeptide repeat containin... KCTD8 0.005 potassium channel tetramerisation domain containing ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.