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Search of human proteins with 89040494
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89040494 PREDICTED: hypothetical protein [Homo sapiens]
(187 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89040494 PREDICTED: hypothetical protein [Homo sapiens] 395 e-110
gi|239752818 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 39 0.003
gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 37 0.010
gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans... 37 0.010
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 36 0.022
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 36 0.022
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 36 0.022
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 36 0.022
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 36 0.022
gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo s... 35 0.029
gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo sa... 35 0.038
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 35 0.038
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 35 0.049
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 35 0.049
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 35 0.049
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 34 0.064
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 34 0.064
gi|188536004 zinc finger protein 469 [Homo sapiens] 34 0.064
gi|37537554 hypothetical protein FLJ37538 [Homo sapiens] 34 0.064
gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo sapi... 34 0.084
gi|239508696 PREDICTED: hypothetical protein [Homo sapiens] 34 0.084
gi|194272140 dendrin [Homo sapiens] 34 0.084
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 34 0.084
gi|239742763 PREDICTED: hypothetical protein [Homo sapiens] 33 0.11
gi|239740974 PREDICTED: hypothetical protein [Homo sapiens] 33 0.11
gi|66346700 N-acetylglucosamine-1-phosphodiester alpha-N-acetylg... 33 0.14
gi|153792764 hypothetical protein LOC57624 [Homo sapiens] 33 0.19
gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens] 33 0.19
gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens] 33 0.19
>gi|89040494 PREDICTED: hypothetical protein [Homo sapiens]
Length = 187
Score = 395 bits (1015), Expect = e-110
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MRQPQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARA 60
MRQPQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARA
Sbjct: 1 MRQPQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARA 60
Query: 61 RRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGT 120
RRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGT
Sbjct: 61 RRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGT 120
Query: 121 SEMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSPWERGSWKWLWAF 180
SEMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSPWERGSWKWLWAF
Sbjct: 121 SEMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSPWERGSWKWLWAF 180
Query: 181 LGEALTE 187
LGEALTE
Sbjct: 181 LGEALTE 187
>gi|239752818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 38.9 bits (89), Expect = 0.003
Identities = 48/164 (29%), Positives = 59/164 (35%), Gaps = 27/164 (16%)
Query: 32 PGKPRPRPSALYGP------RARVLPARDLSSARARRDAFAEPRPCHV--GLFGSREAPP 83
PG PRPRP P R+ V ARDL + R P C V + SR P
Sbjct: 13 PGSPRPRPPPFAAPYLAQAGRSCVRRARDLYG--SLRILPLPPTDCVVLSQTYWSRGPLP 70
Query: 84 PR---PLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIA-GPVECGERGSSFFP 139
P+ P+ P RR PR GG + G SE GP S P
Sbjct: 71 PQRSTPMASPARRGQFPACYAKSPSAAPRLGGFFRKRLGGSEEAEDGPESRSAPPWSHTP 130
Query: 140 RGPCQGLLQSQWVPSPK-------------PSSPGGKRFSSPWE 170
R P + + S W +P+ P+S GG WE
Sbjct: 131 RSPRRIGVLSLWPGAPRATFARAAENLSRGPASVGGALGRRGWE 174
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 38.9 bits (89), Expect = 0.003
Identities = 45/130 (34%), Positives = 52/130 (40%), Gaps = 25/130 (19%)
Query: 12 AGRKAGFGDGK-GAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRP 70
AG +A + + GAG S + PG P P A GP R AR R F PR
Sbjct: 156 AGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGPLLR--------PARPPRPYFPRPRT 207
Query: 71 CHVGLFGSREAPPPRPLCH---------PQRRAVEALT----LRAVL-EPGPRTGGVSAR 116
SR+ PPP PLC P R + LT LR L E G RT S R
Sbjct: 208 PPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTPPLALRCALPERGSRT--PSTR 265
Query: 117 GTGTSEMIAG 126
S +AG
Sbjct: 266 SAVLSGRVAG 275
>gi|239750109 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 529
Score = 37.0 bits (84), Expect = 0.010
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 18/72 (25%)
Query: 80 EAPPPRP--LCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGP--VECGERGS 135
EAPPP P LC PQ PG +GG + R G + +AGP V+ +
Sbjct: 371 EAPPPIPACLCQPQ--------------PGEGSGGAAGRDRGGCDGVAGPPWVQRARQTP 416
Query: 136 SFFPRGPCQGLL 147
P G C G+L
Sbjct: 417 EAHPPGACVGIL 428
>gi|239744415 PREDICTED: similar to unc-93 homolog B1 (C. elegans)
[Homo sapiens]
Length = 503
Score = 37.0 bits (84), Expect = 0.010
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 18/72 (25%)
Query: 80 EAPPPRP--LCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGP--VECGERGS 135
EAPPP P LC PQ PG +GG + R G + +AGP V+ +
Sbjct: 345 EAPPPIPACLCQPQ--------------PGEGSGGAAGRDRGGCDGVAGPPWVQRARQTP 390
Query: 136 SFFPRGPCQGLL 147
P G C G+L
Sbjct: 391 EAHPPGACVGIL 402
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 35 PRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRA 94
P +AL RA +LP S R + A+ R V L G+ + PPRPL P RA
Sbjct: 58 PHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPL--PAARA 115
Query: 95 VEALTL--------RAVLEPG-PRTGGVSARGTGTSEM----IAGPVEC----GERGSSF 137
+ +PG P GG G G + I GP G G +
Sbjct: 116 AARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAP 175
Query: 138 FPRGPCQGLLQSQWV---PSPKPSSPGGKRFSSP 168
PR L + V P P S PGGK+ ++P
Sbjct: 176 RPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAP 209
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 35 PRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRA 94
P +AL RA +LP S R + A+ R V L G+ + PPRPL P RA
Sbjct: 58 PHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPL--PAARA 115
Query: 95 VEALTL--------RAVLEPG-PRTGGVSARGTGTSEM----IAGPVEC----GERGSSF 137
+ +PG P GG G G + I GP G G +
Sbjct: 116 AARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAP 175
Query: 138 FPRGPCQGLLQSQWV---PSPKPSSPGGKRFSSP 168
PR L + V P P S PGGK+ ++P
Sbjct: 176 RPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAP 209
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 35.8 bits (81), Expect = 0.022
Identities = 44/162 (27%), Positives = 55/162 (33%), Gaps = 11/162 (6%)
Query: 23 GAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEP--RPCHVGLFGSRE 80
GAG S ++ P PR S+L P +V D +S RR P R L SR
Sbjct: 85 GAGPSPKRSPPPRAPRASSLAAPEPQV---GDWTSREGRRGGPCLPGARRRLFSLSVSRS 141
Query: 81 APPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSAR---GTGTSEMIAGPVECGERGSSF 137
+ PPR A E + E G R G AR T + A P G
Sbjct: 142 SGPPRARSCAPHPAREGMATTRGPEAGLRVSGRGARAGSSTAPTRAQASPARPGFPPCLR 201
Query: 138 FPRGPCQGLLQSQWVPSPKPSSPGGKRFSSP---WERGSWKW 176
P P + K G+ P WE G +W
Sbjct: 202 SPPCPASSRAFRSCLSRAKAWDTAGQTAGQPSEKWEEGRKQW 243
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/154 (29%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 35 PRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREAPPPRPLCHPQRRA 94
P +AL RA +LP S R + A+ R V L G+ + PPRPL P RA
Sbjct: 95 PHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPL--PAARA 152
Query: 95 VEALTL--------RAVLEPG-PRTGGVSARGTGTSEM----IAGPVEC----GERGSSF 137
+ +PG P GG G G + I GP G G +
Sbjct: 153 AARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAP 212
Query: 138 FPRGPCQGLLQSQWV---PSPKPSSPGGKRFSSP 168
PR L + V P P S PGGK+ ++P
Sbjct: 213 RPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAP 246
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 35.8 bits (81), Expect = 0.022
Identities = 46/158 (29%), Positives = 57/158 (36%), Gaps = 22/158 (13%)
Query: 7 LPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFA 66
LPG AA RK GRS ++ P + RPR + G A R S RAR+ A
Sbjct: 370 LPGRAARRKP---PPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRR--GSPRARK---A 421
Query: 67 EPRPCHVGLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGP----RTGGVSARGTGTSE 122
L G A P P +P E R P P + G R T+E
Sbjct: 422 SRSQSETSLLGRASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAE 481
Query: 123 MIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSP 160
+ A G PR P + P P PS+P
Sbjct: 482 IDAAD------GRRVRPRAPAARVPG----PGPSPSAP 509
>gi|169217788 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 35.4 bits (80), Expect = 0.029
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 23 GAGRSEQKVPGKPRPRPS-ALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREA 81
G G VPG P P A AR +P S A + ++P P +
Sbjct: 187 GTGLPTPYVPGAPGALPQGAFMSQGARAVPVLQASLAMPA-EGISQPAPARGDFLYATPT 245
Query: 82 PPPRPLCHPQR--------RAVEALTLRAVLEPGPRT----GGVSARGTGTSEMIAGPVE 129
PP L HPQ ++ E L+ PGP T G AR G ++A P
Sbjct: 246 PPEGALSHPQAPRWPAHPGKSREDRELQLDGLPGPCTVGQPGPAQARPQGQG-VLAIP-- 302
Query: 130 CGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSPWERGSWK 175
+GS ++ G + ++ W P + P R +P E +W+
Sbjct: 303 -ASQGSPWWGWGQGPQVARAAWEPQAGAAPP---RQPAPPEASAWQ 344
>gi|89062404 PREDICTED: similar to putative DUX4 protein [Homo
sapiens]
Length = 422
Score = 35.0 bits (79), Expect = 0.038
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 23 GAGRSEQKVPGKPRPRPS-ALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREA 81
G G VPG P P A AR +P S A + ++P P +
Sbjct: 187 GTGLPTPYVPGAPGALPQGAFMSQGARAVPVLQASLAMPA-EGISQPAPARGDFLYATPT 245
Query: 82 PPPRPLCHPQR--------RAVEALTLRAVLEPGPRT----GGVSARGTGTSEMIAGPVE 129
PP L HPQ ++ E L+ PGP T G AR G ++A P
Sbjct: 246 PPEGALSHPQAPRWPAHPGKSREDRELQLDGLPGPCTVGQPGPAQARPQGQG-VLAIP-- 302
Query: 130 CGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSPWERGSWK 175
+GS ++ G + ++ W P + P R +P E +W+
Sbjct: 303 -ASQGSPWWGWGRGPQVARAAWEPQAGAAPP---RQPAPPEASAWQ 344
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 35.0 bits (79), Expect = 0.038
Identities = 41/130 (31%), Positives = 51/130 (39%), Gaps = 23/130 (17%)
Query: 4 PQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRD 63
P + P V AGR+A G G ++ P R R S L PR + ++ R RR
Sbjct: 119 PARTPAVRAGRRAADGPG-------EEAPAPGRARFSGLSQPRG----PQPRAAVRPRRG 167
Query: 64 AFAEPRPCHVGLFGSREAPPPRPLCHPQ--RRAVEALTLRAVLEPGPRTGGVSARGTGTS 121
A PR G+ P P PQ RR + L L P G SARG
Sbjct: 168 G-ALPR-------GTGAVPERGPGTEPQRGRRCSDLQGLGGRLRGCP--AGPSARGERQR 217
Query: 122 EMIAGPVECG 131
I V+CG
Sbjct: 218 HTITSGVDCG 227
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 34.7 bits (78), Expect = 0.049
Identities = 46/160 (28%), Positives = 54/160 (33%), Gaps = 40/160 (25%)
Query: 15 KAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVG 74
KAG + R E GKPR P A + RDA P P G
Sbjct: 730 KAGRLAKRCGERHEAPEQGKPRLPPQAWHDQG---------------RDAPPGPTPARRG 774
Query: 75 LFGSREAPPPRPLCHPQRR----------AVEALTLRAVLE---PGPRTGGVSARGTGTS 121
L PPP PL P RR A LR ++ PG R TG S
Sbjct: 775 L-PRPPPPPPPPLPPPPRREPCHRAWPGPAQPLGNLRPPVQQSAPGGRKCVKEGEATGPS 833
Query: 122 EMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPG 161
+ GP EC + G + G +P SSPG
Sbjct: 834 KETRGPKECRQVGEAVLGEG-----------EAPMQSSPG 862
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 34.7 bits (78), Expect = 0.049
Identities = 46/160 (28%), Positives = 54/160 (33%), Gaps = 40/160 (25%)
Query: 15 KAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVG 74
KAG + R E GKPR P A + RDA P P G
Sbjct: 730 KAGRLAKRCGERHEAPEQGKPRLPPQAWHDQG---------------RDAPPGPTPARRG 774
Query: 75 LFGSREAPPPRPLCHPQRR----------AVEALTLRAVLE---PGPRTGGVSARGTGTS 121
L PPP PL P RR A LR ++ PG R TG S
Sbjct: 775 L-PRPPPPPPPPLPPPPRREPCHRAWPGPAQPLGNLRPPVQQSAPGGRKCVKEGEATGPS 833
Query: 122 EMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPG 161
+ GP EC + G + G +P SSPG
Sbjct: 834 KETRGPKECRQVGEAVLGEG-----------EAPMQSSPG 862
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 34.7 bits (78), Expect = 0.049
Identities = 46/160 (28%), Positives = 54/160 (33%), Gaps = 40/160 (25%)
Query: 15 KAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVG 74
KAG + R E GKPR P A + RDA P P G
Sbjct: 730 KAGRLAKRCGERHEAPEQGKPRLPPQAWHDQG---------------RDAPPGPTPARRG 774
Query: 75 LFGSREAPPPRPLCHPQRR----------AVEALTLRAVLE---PGPRTGGVSARGTGTS 121
L PPP PL P RR A LR ++ PG R TG S
Sbjct: 775 L-PRPPPPPPPPLPPPPRREPCHRAWPGPAQPLGNLRPPVQQSAPGGRKCVKEGEATGPS 833
Query: 122 EMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPG 161
+ GP EC + G + G +P SSPG
Sbjct: 834 KETRGPKECRQVGEAVLGEG-----------EAPMQSSPG 862
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 34.3 bits (77), Expect = 0.064
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 12 AGRKAGFGDGK-GAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRP 70
AG +A + + GAG S + PG P P A GP R + +S R EP
Sbjct: 203 AGHRAATAEHQLGAGFSVRNGPGPPARLPPAPPGPPLRPARPHNPTSRGPGRLLTCEPP- 261
Query: 71 CHVGLFGSREAPPPRPLC 88
SR+ PPP PLC
Sbjct: 262 -------SRKLPPPLPLC 272
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 34.3 bits (77), Expect = 0.064
Identities = 46/160 (28%), Positives = 54/160 (33%), Gaps = 40/160 (25%)
Query: 15 KAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCHVG 74
KAG + R E GKPR P A + RDA P P G
Sbjct: 402 KAGRLAKRCGERHEAPEQGKPRLPPQAWHDQG---------------RDAPPGPTPARRG 446
Query: 75 LFGSREAPPPRPLCHPQRR----------AVEALTLRAVLE---PGPRTGGVSARGTGTS 121
L PPP PL P RR A LR ++ PG R TG S
Sbjct: 447 L-PRPPPPPPPPLPPPPRREPCHRAWPGPAQPLGNLRPPVQQSAPGGRKCVKEGEATGPS 505
Query: 122 EMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPG 161
+ GP EC + G + G +P SSPG
Sbjct: 506 KETRGPKECRQVGEAVLGEG-----------GAPMQSSPG 534
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 34.3 bits (77), Expect = 0.064
Identities = 36/130 (27%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 5 QQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDA 64
+ PG A R +G G +E PG P R L+ P A P A R
Sbjct: 404 RHFPGQAY-RASGVDTSPGPPDTELAAPGPPPARLPQLWDPTAAPYPTPPGGPLAATRSM 462
Query: 65 FAEPRPC---HVGLFGSREAPPPR--PLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTG 119
F +P + L S P P+ P P +E L+ GP G S G
Sbjct: 463 FFNGQPSPGQRLCLPQSAPLPWPQVLPTARPSPHGMEMLSRLPFPAGGPEWQGGSQGALG 522
Query: 120 TSEMIAGPVE 129
T+ GP E
Sbjct: 523 TAGKTPGPRE 532
Score = 27.7 bits (60), Expect = 6.0
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 13 GRKAGFGDGKGAGRSEQKVPGKPRPRPSALYG--------PRARVLPARDLSSARARRDA 64
GR +G + G E+ P RPR A PRA LP SS R R
Sbjct: 973 GRASGLRPRRNDGLGERPPPRPRRPRTQAPGSRADPAPRVPRAAALPEETRSSRRRRLPP 1032
Query: 65 FAEPR 69
+PR
Sbjct: 1033 RKDPR 1037
>gi|37537554 hypothetical protein FLJ37538 [Homo sapiens]
Length = 841
Score = 34.3 bits (77), Expect = 0.064
Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 13 GRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRDAFAEPRPCH 72
G G G S ++ P KPR PS + V P + +++ +P P
Sbjct: 96 GGPGGASGGLTEDSSTRRPPAKPRRHPST---KLSMVGPGSGAETPPSKKAGSQKPTP-- 150
Query: 73 VGLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECG 131
G SR+ PP +P P + + P PR G + + +AG + G
Sbjct: 151 EGRESSRKVPPQKPRRSPNTQLSVSFDESCPPGPSPRGGNLPLQRLTRGSRVAGDPDVG 209
>gi|239758086 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 422
Score = 33.9 bits (76), Expect = 0.084
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 19/136 (13%)
Query: 23 GAGRSEQKVPGKPRPRPSALYGPR-ARVLPARDLSSARARRDAFAEPRPCHVGLFGSREA 81
G G +P P P+ +G + AR +P S A A + ++P P + A
Sbjct: 187 GTGLPPHHLPCVPAALPTGAFGSQGARAVPVLXPSQA-APAEGISQPAPALKHFAYAAPA 245
Query: 82 PPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECGERG-SSFFPR 140
PP L HPQ ++ + P+ G+S GP G+ G + P
Sbjct: 246 PPEGALSHPQATRWPPHPGKSWEDRDPQRDGLS-----------GPCAVGQPGPAQAVPH 294
Query: 141 GPCQGLL---QSQWVP 153
G QG+L SQW P
Sbjct: 295 G--QGVLAPPASQWSP 308
>gi|239508696 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 33.9 bits (76), Expect = 0.084
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 75 LFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECGERG 134
LF P P LC P R + LRA L P GG+ + TG AGP
Sbjct: 283 LFWLNSCPAPNRLCRP--RTFSSQALRAHLLP---PGGLYSSSTGWRTASAGPALAS--- 334
Query: 135 SSFFPRGPCQGLLQSQWVPSPKPSSPGGK 163
QG LQ+Q +P +P PG K
Sbjct: 335 ---------QGPLQAQLLPPRRP--PGAK 352
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 33.9 bits (76), Expect = 0.084
Identities = 39/150 (26%), Positives = 54/150 (36%), Gaps = 22/150 (14%)
Query: 24 AGRSEQKVPGKPRPRP------SALYGPRARVLPARDLSSARARRDAF---AEPRPCHVG 74
AG + + PG+PRP P + L G A + P R RA R + ++P G
Sbjct: 132 AGGARRSPPGRPRPEPRNAPRVAQLAGLPAPLRPERLAPVGRAPRPSAQPQSDPGSAWAG 191
Query: 75 LFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECGERG 134
+G R PP H L LR PR R +A P G
Sbjct: 192 PWGGRRPGPPSYEAH--------LLLRGSAGTAPR-----RRWDRPPPYVAPPSYEGPHR 238
Query: 135 SSFFPRGPCQGLLQSQWVPSPKPSSPGGKR 164
+ RGP + + P+ P+ G R
Sbjct: 239 TLGTKRGPGNSQVPTSSAPAATPARTDGGR 268
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 33.9 bits (76), Expect = 0.084
Identities = 43/176 (24%), Positives = 56/176 (31%), Gaps = 37/176 (21%)
Query: 4 PQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARRD 63
P P A R+E +VP +P P P P D++ R +R
Sbjct: 511 PAPAPAPAPAPAPALASAATKERTESEVPPRPAS-PKVTRSPPETAAPVEDMAR-RTKRP 568
Query: 64 AFAEPRPCHVGLFGSREAPPPRPL-----------CHPQRRAVEALTLRAVLEPGPRTGG 112
A A P + GSR +PP PL P+R +L V P P T
Sbjct: 569 APARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPT-- 626
Query: 113 VSARGTGTSEMIAGPVECGERGSSFFPRGPCQGLLQSQWVPSPKPSSPGGKRFSSP 168
P + R S P P SP P+SP S+P
Sbjct: 627 --------------PPQPARRQSRRSPASPSPA--------SPGPASPSPVSLSNP 660
>gi|239742763 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 33.5 bits (75), Expect = 0.11
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 19/89 (21%)
Query: 75 LFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECGERG 134
LF P P LC P R + LRA L P GG+ + TG AGP
Sbjct: 283 LFWLNSCPAPNRLCRP--RTFSSQALRAHLLP---PGGLYSSSTGWRTASAGP------- 330
Query: 135 SSFFPRGPCQGLLQSQWVPSPKPSSPGGK 163
S +GP LQ+Q +P +P PG K
Sbjct: 331 -SLASQGP----LQAQLLPPRRP--PGAK 352
>gi|239740974 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 33.5 bits (75), Expect = 0.11
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 19/89 (21%)
Query: 75 LFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPRTGGVSARGTGTSEMIAGPVECGERG 134
LF P P LC P R + LRA L P GG+ + TG AGP
Sbjct: 283 LFWLNSCPAPNRLCRP--RTFSSQALRAHLLP---PGGLYSSSTGWRTASAGP------- 330
Query: 135 SSFFPRGPCQGLLQSQWVPSPKPSSPGGK 163
S +GP LQ+Q +P +P PG K
Sbjct: 331 -SLASQGP----LQAQLLPPRRP--PGAK 352
>gi|66346700 N-acetylglucosamine-1-phosphodiester
alpha-N-acetylglucosaminidase precursor [Homo sapiens]
Length = 515
Score = 33.1 bits (74), Expect = 0.14
Identities = 42/128 (32%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Query: 45 PRARVLPARDLSSARA--RRDAFAEPRPCHVGLFGSREAP-----PPRPLCHPQRRAVEA 97
PRAR RD + RA R P P G G R + RAVE
Sbjct: 41 PRARARLPRDCTRVRAGNREHESWPPPPATPGAGGLAVRTFVSHFRDRAVAGHLTRAVEP 100
Query: 98 LTLRAVLEPGPRTGGVSARGTGTSEMIAGPVEC--GERGSSF-FPRGPCQGLLQSQWVPS 154
L +VLEPG GG +AR T E A +C + G F G C G + S
Sbjct: 101 LRTFSVLEPG-GPGGCAARRRATVEETARAADCRVAQNGGFFRMNSGECLGNVVSD---E 156
Query: 155 PKPSSPGG 162
+ SS GG
Sbjct: 157 RRVSSSGG 164
>gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
Length = 653
Score = 32.7 bits (73), Expect = 0.19
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 17 GFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARA---RRDAFAEPRPCHV 73
G D G S ++ P KP+ PS + + + S + R +A A+PRP H
Sbjct: 126 GTDDDSSCG-SRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRP-HS 183
Query: 74 GLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPR 109
+ S++ PPP+P +P + + + + GPR
Sbjct: 184 DEY-SKKIPPPKPKRNPNTQLSTSFDETYIKKHGPR 218
>gi|239757444 PREDICTED: similar to hCG2019076 [Homo sapiens]
Length = 231
Score = 32.7 bits (73), Expect = 0.19
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 3 QPQQLPGVAAGRKAGFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARARR 62
+PQ+ P V G G G G S P R P+A + R D + +
Sbjct: 48 EPQRAPPVPGASPGSLGAGTGGGVSAATAPYLSRALPAATFLSSQRRWGGGDRIGG-SDQ 106
Query: 63 DAFAEPRPCHVGLFGSREAPP 83
A A P P H + +R+ PP
Sbjct: 107 GACATPGPAHPSIPCNRQPPP 127
>gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens]
Length = 669
Score = 32.7 bits (73), Expect = 0.19
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 17 GFGDGKGAGRSEQKVPGKPRPRPSALYGPRARVLPARDLSSARA---RRDAFAEPRPCHV 73
G D G S ++ P KP+ PS + + + S + R +A A+PRP H
Sbjct: 126 GTDDDSSCG-SRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRP-HS 183
Query: 74 GLFGSREAPPPRPLCHPQRRAVEALTLRAVLEPGPR 109
+ S++ PPP+P +P + + + + GPR
Sbjct: 184 DEY-SKKIPPPKPKRNPNTQLSTSFDETYIKKHGPR 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,626,921
Number of Sequences: 37866
Number of extensions: 698545
Number of successful extensions: 3188
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 3022
Number of HSP's gapped (non-prelim): 418
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.