PRAMEF1 2911

Name: PRAMEF1	Sequence: fasta or formatted (474aa)		NCBI GI: 12738831
Description: PRAME family member 1		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 20 2 C cysteine 4.0 19 2 D aspartate 2.5 12 1 E glutamate 7.2 34 2 F phenylalanine 3.8 18 2 G glycine 3.4 16 1 H histidine 2.7 13 2 I isoleucine 4.9 23 2 K lysine 5.3 25 1 L leucine 19.2 91 2 M methionine 2.5 12 1 N asparagine 2.5 12 1 P proline 5.5 26 2 Q glutamine 4.6 22 1 R arginine 7.2 34 2 S serine 7.6 36 2 T threonine 4.4 21 2 V valine 3.4 16 1 W tryptophan 1.7 8 1 Y tyrosine 3.4 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PRAME family member 1 PRAMEF13 0.966 PRAME family member 13 PRAMEF2 0.933 PRAME family member 2 PRAMEF14 0.845 PRAME family member 14 PRAMEF19 0.576 PRAME family member 19 PRAMEF22 0.571 PRAME family member 22 PRAMEF18 0.571 PRAME family member 18 PRAMEF3 0.565 PRAME family member 3 PRAMEF10 0.565 PRAME family member 10 PRAMEF17 0.563 PRAME family member 17 PRAMEF16 0.561 PRAME family member 16 LOC645382 0.521 PREDICTED: similar to PRAME family member 10 LOC645399 0.520 PREDICTED: similar to PRAME family member 10 PRAMEF25 0.473 PREDICTED: PRAME family member 25-like PRAMEF12 0.468 PRAME family member 12 LOC729516 0.453 PREDICTED: similar to Putative PRAME family member ... PRAMEF8 0.453 PRAME family member 8 PRAMEF7 0.450 PRAME family member 7 PRAMEF20 0.428 PRAME family member 20 PRAMEF21 0.428 PRAME family member 21 PRAMEF15 0.409 PRAME family member 15 PRAMEF9 0.409 PRAME family member 9 PRAMEF5 0.409 PRAME family member 5 PRAMEF6 0.409 PRAME family member 6 PRAMEF23 0.406 PREDICTED: PRAME family member 23 PRAMEF11 0.402 PREDICTED: PRAME family member 11 PRAMEF4 0.400 PRAME family member 4 PRAME 0.349 preferentially expressed antigen in melanoma PRAME 0.349 preferentially expressed antigen in melanoma PRAME 0.349 preferentially expressed antigen in melanoma Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.