C12orf40 36653

Name: C12orf40	Sequence: fasta or formatted (652aa)		NCBI GI: 87299626
Description: hypothetical protein LOC283461		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.0 13 2 C cysteine 3.2 21 1 D aspartate 6.4 42 2 E glutamate 6.7 44 2 F phenylalanine 3.2 21 1 G glycine 3.1 20 2 H histidine 2.1 14 1 I isoleucine 5.4 35 1 K lysine 9.2 60 3 L leucine 7.2 47 2 M methionine 2.6 17 1 N asparagine 8.4 55 2 P proline 4.0 26 1 Q glutamine 5.5 36 2 R arginine 4.8 31 2 S serine 12.7 83 4 T threonine 5.7 37 2 V valine 4.6 30 2 W tryptophan 0.5 3 1 Y tyrosine 2.6 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC283461 DSPP 0.015 dentin sialophosphoprotein preproprotein RSF1 0.009 remodeling and spacing factor 1 NOBOX 0.009 NOBOX oogenesis homeobox ATRX 0.008 transcriptional regulator ATRX isoform 2 ATRX 0.008 transcriptional regulator ATRX isoform 1 CIR1 0.008 CBF1 interacting corepressor SCG2 0.008 secretogranin II precursor FAM133A 0.008 hypothetical protein LOC286499 TTC18 0.007 tetratricopeptide repeat domain 18 CYLC1 0.007 cylicin, basic protein of sperm head cytoskeleton 1... COPS2 0.007 COP9 constitutive photomorphogenic homolog subunit 2 ... ALMS1 0.006 Alstrom syndrome 1 RBBP6 0.006 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.006 retinoblastoma-binding protein 6 isoform 1 NKTR 0.006 natural killer-tumor recognition sequence PCF11 0.006 pre-mRNA cleavage complex II protein Pcf11 FAM21A 0.006 hypothetical protein LOC387680 FAM21B 0.006 hypothetical protein LOC55747 LRP1 0.006 low density lipoprotein-related protein 1 MAP1B 0.006 microtubule-associated protein 1B FAM21C 0.006 hypothetical protein LOC253725 LOC643677 0.005 hypothetical protein LOC643677 LOC643677 0.005 PREDICTED: hypothetical protein LOC643677 LOC643677 0.005 PREDICTED: hypothetical protein LOC643677 ANKRD11 0.005 ankyrin repeat domain 11 CHD1 0.005 chromodomain helicase DNA binding protein 1 LOC643677 0.005 PREDICTED: hypothetical protein LOC643677 CASP8AP2 0.005 caspase 8 associated protein 2 CASP8AP2 0.005 caspase 8 associated protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.