Search of human proteins with 87116675

Search of human proteins with 87116675

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|87116675 conserved gene telomeric to alpha globin cluster
isoform 2 [Homo sapiens]
         (390 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|116292162 conserved gene telomeric to alpha globin cluster is...   776   0.0  
gi|87116675 conserved gene telomeric to alpha globin cluster iso...   776   0.0  
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]               34   0.26 
gi|22209009 protein kinase CHK2 isoform b [Homo sapiens]               34   0.26 
gi|6005850 protein kinase CHK2 isoform a [Homo sapiens]                34   0.26 
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H...    31   2.2  
gi|169881275 phosphorylase kinase, alpha 1 (muscle) isoform 2 [H...    31   2.2  
gi|169881273 phosphorylase kinase, alpha 1 (muscle) isoform 1 [H...    31   2.2  
gi|239742580 PREDICTED: similar to Putative POM121-like protein ...    30   3.7  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     30   3.7  
gi|54607124 RNA binding motif protein 15B [Homo sapiens]               30   3.7  
gi|190684671 mitogen-activated protein kinase binding protein 1 ...    30   3.7  
gi|190684677 mitogen-activated protein kinase binding protein 1 ...    30   3.7  
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]    30   4.9  
gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]      30   4.9  
gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]      30   4.9  
gi|20070331 oxysterol binding protein-like 9 isoform e [Homo sap...    30   4.9  
gi|22547176 oxysterol binding protein-like 9 isoform f [Homo sap...    30   4.9  
gi|22547173 oxysterol binding protein-like 9 isoform d [Homo sap...    30   4.9  
gi|22547171 oxysterol binding protein-like 9 isoform c [Homo sap...    30   4.9  
gi|22547169 oxysterol binding protein-like 9 isoform b [Homo sap...    30   4.9  
gi|22547167 oxysterol binding protein-like 9 isoform a [Homo sap...    30   4.9  
gi|22547165 oxysterol binding protein-like 9 isoform a [Homo sap...    30   4.9  
gi|49472835 bridging integrator 2 [Homo sapiens]                       30   4.9  
gi|47933339 RNA binding motif protein 15 [Homo sapiens]                29   6.4  
gi|105990532 apolipoprotein B precursor [Homo sapiens]                 29   8.3  
gi|149944548 neurobeachin-like 2 [Homo sapiens]                        29   8.3  
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H...    29   8.3  
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho...    29   8.3  
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H...    29   8.3  

>gi|116292162 conserved gene telomeric to alpha globin cluster
           isoform 1 [Homo sapiens]
          Length = 569

 Score =  776 bits (2004), Expect = 0.0
 Identities = 390/390 (100%), Positives = 390/390 (100%)

Query: 1   MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA 60
           MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA
Sbjct: 180 MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA 239

Query: 61  SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA 120
           SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA
Sbjct: 240 SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA 299

Query: 121 QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH 180
           QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH
Sbjct: 300 QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH 359

Query: 181 DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE 240
           DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE
Sbjct: 360 DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE 419

Query: 241 EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN 300
           EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN
Sbjct: 420 EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN 479

Query: 301 QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ 360
           QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ
Sbjct: 480 QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ 539

Query: 361 LLMLFDKFRSVLVVTTHEDPVIAVFQALLP 390
           LLMLFDKFRSVLVVTTHEDPVIAVFQALLP
Sbjct: 540 LLMLFDKFRSVLVVTTHEDPVIAVFQALLP 569


>gi|87116675 conserved gene telomeric to alpha globin cluster
           isoform 2 [Homo sapiens]
          Length = 390

 Score =  776 bits (2004), Expect = 0.0
 Identities = 390/390 (100%), Positives = 390/390 (100%)

Query: 1   MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA 60
           MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA
Sbjct: 1   MADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAA 60

Query: 61  SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA 120
           SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA
Sbjct: 61  SSLIPPEAIERSLKAIRPYHALLLLSDEKSLLGELPIDCSPALVRVIKTTSAVKNLQQLA 120

Query: 121 QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH 180
           QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH
Sbjct: 121 QDADLALLQVFQLAAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSH 180

Query: 181 DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE 240
           DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE
Sbjct: 181 DLPSVLAKFSLPVSLSEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEE 240

Query: 241 EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN 300
           EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN
Sbjct: 241 EPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN 300

Query: 301 QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ 360
           QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ
Sbjct: 301 QRMTENLLASLSEHERAAILSVPAAQNPEDLRMFARLLHYFRGRHHLEEIMYNENTRRSQ 360

Query: 361 LLMLFDKFRSVLVVTTHEDPVIAVFQALLP 390
           LLMLFDKFRSVLVVTTHEDPVIAVFQALLP
Sbjct: 361 LLMLFDKFRSVLVVTTHEDPVIAVFQALLP 390


>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
          Length = 586

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 245 REDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMT 304
           RE DV      G  + S P+    GS T S   +  S  + +SS   +P+  S  +   +
Sbjct: 3   RESDVEAQQSHGSSACSQPH----GSVTQSQGSSSQSQGISSSSTSTMPN--SSQSSHSS 56

Query: 305 ENLLASLSEHERAAILSVPAAQNPED 330
              L+SL       + S+P  Q PED
Sbjct: 57  SGTLSSLETVSTQELYSIPEDQEPED 82


>gi|22209009 protein kinase CHK2 isoform b [Homo sapiens]
          Length = 514

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 245 REDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMT 304
           RE DV      G  + S P+    GS T S   +  S  + +SS   +P+  S  +   +
Sbjct: 3   RESDVEAQQSHGSSACSQPH----GSVTQSQGSSSQSQGISSSSTSTMPN--SSQSSHSS 56

Query: 305 ENLLASLSEHERAAILSVPAAQNPED 330
              L+SL       + S+P  Q PED
Sbjct: 57  SGTLSSLETVSTQELYSIPEDQEPED 82


>gi|6005850 protein kinase CHK2 isoform a [Homo sapiens]
          Length = 543

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 245 REDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMT 304
           RE DV      G  + S P+    GS T S   +  S  + +SS   +P+  S  +   +
Sbjct: 3   RESDVEAQQSHGSSACSQPH----GSVTQSQGSSSQSQGISSSSTSTMPN--SSQSSHSS 56

Query: 305 ENLLASLSEHERAAILSVPAAQNPED 330
              L+SL       + S+P  Q PED
Sbjct: 57  SGTLSSLETVSTQELYSIPEDQEPED 82


>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
            sapiens]
          Length = 1560

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 233  LMASPSEEEP-----RPRED--------DVPFTARV--GGRSLSTPNALSFGSPTSSDDM 277
            L A P  EEP      P  D        D+P    +   G S+++P  ++    +   D+
Sbjct: 1315 LQAEPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSGKRDL 1374

Query: 278  TLTS---PSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDLRMF 334
             L S   P +     EL  +  +PL + M E  L  ++  E  +I  +  A  P DL   
Sbjct: 1375 ELLSSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERI 1434

Query: 335  ARLLHYFRGRHH 346
              LL   +   H
Sbjct: 1435 RTLLELEKAERH 1446


>gi|169881275 phosphorylase kinase, alpha 1 (muscle) isoform 2 [Homo
           sapiens]
          Length = 1210

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 35  SGVVRLHINSWLEV-SFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKS 90
           SG++R  + +  E  +  L H+ H      +PPE  E+++ A  PY AL  L DE S
Sbjct: 830 SGILRKKVEALDEACTDLLSHQKHLTVG--LPPEPREKTISAPLPYEALTQLIDEAS 884


>gi|169881273 phosphorylase kinase, alpha 1 (muscle) isoform 1 [Homo
           sapiens]
          Length = 1223

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 35  SGVVRLHINSWLEV-SFCLPHKIHYAASSLIPPEAIERSLKAIRPYHALLLLSDEKS 90
           SG++R  + +  E  +  L H+ H      +PPE  E+++ A  PY AL  L DE S
Sbjct: 830 SGILRKKVEALDEACTDLLSHQKHLTVG--LPPEPREKTISAPLPYEALTQLIDEAS 884


>gi|239742580 PREDICTED: similar to Putative POM121-like protein
           1-like [Homo sapiens]
          Length = 897

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 236 SPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTL 279
           SP  ++ RPR   +P   R  G  L  P  L  G   +++D+ L
Sbjct: 148 SPRSQDSRPRRRKIPLLPRRRGEPLMLPPPLELGYRVTAEDLHL 191


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 256 GGRSLSTPN-ALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEH 314
           G RS S+ + ++S  S TSSD    +S S D+S A  + S   P     T  LL+SL + 
Sbjct: 273 GSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVP---APTSQLLSSLEKD 329

Query: 315 ERAAILSVPAAQNP---EDLRMFARLLHYFR 342
           E      +     P    D  +   L H F+
Sbjct: 330 EPRKSFGIKVQNLPVRSTDTSLKDGLFHEFK 360


>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
          Length = 890

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 269 GSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHERAAILSVP 323
           GSP     +  T  +      E +P+ +  L +R+  NL++ L + + A ++S+P
Sbjct: 786 GSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLRNLVSYLKQKQAAGVISLP 840


>gi|190684671 mitogen-activated protein kinase binding protein 1
            isoform a [Homo sapiens]
          Length = 1508

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 33/157 (21%)

Query: 2    ADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAAS 61
            + GN  PQ     +LP+C+L  D   A   + T+        S L+ +      +H    
Sbjct: 1148 SSGNPSPQQAASVLLPRCRLNPDSSWAPKRVATASPF-----SGLQKA----QSVH---- 1194

Query: 62   SLIPPEAIERSLKAIRPYHALLLLSDEKSLLGEL-PIDCSP------------ALVRVIK 108
            SL+P E  E SL+A  P   L    + +  LG L P D  P            ++ ++ +
Sbjct: 1195 SLVPQERHEASLQAPSPGALLSREIEAQDGLGSLPPADGRPSRPHSYQNPTTSSMAKISR 1254

Query: 109  TTSAVKNLQQLAQDADLALLQVFQLA-------AHLV 138
            + S  +NL  +A+    A ++V  L+       AHLV
Sbjct: 1255 SISVGENLGLVAEPQAHAPIRVSPLSKLALPSRAHLV 1291


>gi|190684677 mitogen-activated protein kinase binding protein 1
            isoform b [Homo sapiens]
          Length = 1514

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 33/157 (21%)

Query: 2    ADGNEGPQSPFHHILPKCKLARDLKEAYDSLCTSGVVRLHINSWLEVSFCLPHKIHYAAS 61
            + GN  PQ     +LP+C+L  D   A   + T+        S L+ +      +H    
Sbjct: 1154 SSGNPSPQQAASVLLPRCRLNPDSSWAPKRVATASPF-----SGLQKA----QSVH---- 1200

Query: 62   SLIPPEAIERSLKAIRPYHALLLLSDEKSLLGEL-PIDCSP------------ALVRVIK 108
            SL+P E  E SL+A  P   L    + +  LG L P D  P            ++ ++ +
Sbjct: 1201 SLVPQERHEASLQAPSPGALLSREIEAQDGLGSLPPADGRPSRPHSYQNPTTSSMAKISR 1260

Query: 109  TTSAVKNLQQLAQDADLALLQVFQLA-------AHLV 138
            + S  +NL  +A+    A ++V  L+       AHLV
Sbjct: 1261 SISVGENLGLVAEPQAHAPIRVSPLSKLALPSRAHLV 1297


>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
          Length = 753

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 12/91 (13%)

Query: 235 ASPSEEEPRPREDDVPF---------TARVGGRSLST-PNAL--SFGSPTSSDDMTLTSP 282
           +SP   EP P+  D P          +A V G S ST P++   S  + T SD  T T  
Sbjct: 654 SSPPPPEPSPQAPDGPSLQLPAQTFSSAPVPGSSSSTLPSSCEQSRQAETPSDPQTETLS 713

Query: 283 SMDNSSAELLPSGDSPLNQRMTENLLASLSE 313
           +MD S    L S D+P N    E LL    E
Sbjct: 714 AMDVSEFLSLQSLDTPSNLIPIEALLQGEEE 744


>gi|35493713 vacuolar protein sorting 13B isoform 5 [Homo sapiens]
          Length = 4022

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 18/122 (14%)

Query: 145  IIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAK-------FSLPVS--L 195
            ++ P+C      +S  ++     PLA+Q S+Q   +    V  K        S+PV   L
Sbjct: 986  LVMPVCRRKEDEVSIGSA-----PLAKQQSYQASEYASSPVKTKTVTESRPLSVPVKAML 1040

Query: 196  SEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPR---EDDVPFT 252
            +   +  +P  +  + I  +VW   + L +QL    C +  P++  P P      D+P T
Sbjct: 1041 NISESCRSPEERMKEFIG-IVWNAVKHLTLQLEVQSCCVFIPNDSLPSPSTIVSGDIPGT 1099

Query: 253  AR 254
             R
Sbjct: 1100 VR 1101


>gi|35493701 vacuolar protein sorting 13B isoform 1 [Homo sapiens]
          Length = 3997

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 18/122 (14%)

Query: 145  IIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSVLAK-------FSLPVS--L 195
            ++ P+C      +S  ++     PLA+Q S+Q   +    V  K        S+PV   L
Sbjct: 986  LVMPVCRRKEDEVSIGSA-----PLAKQQSYQASEYASSPVKTKTVTESRPLSVPVKAML 1040

Query: 196  SEFRNPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPR---EDDVPFT 252
            +   +  +P  +  + I  +VW   + L +QL    C +  P++  P P      D+P T
Sbjct: 1041 NISESCRSPEERMKEFIG-IVWNAVKHLTLQLEVQSCCVFIPNDSLPSPSTIVSGDIPGT 1099

Query: 253  AR 254
             R
Sbjct: 1100 VR 1101


>gi|20070331 oxysterol binding protein-like 9 isoform e [Homo
           sapiens]
          Length = 736

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 198 NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 251

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 252 QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 284


>gi|22547176 oxysterol binding protein-like 9 isoform f [Homo
           sapiens]
          Length = 746

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 208 NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 261

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 262 QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 294


>gi|22547173 oxysterol binding protein-like 9 isoform d [Homo
           sapiens]
          Length = 723

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 185 NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 238

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 239 QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 271


>gi|22547171 oxysterol binding protein-like 9 isoform c [Homo
           sapiens]
          Length = 626

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 88  NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 141

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 142 QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 174


>gi|22547169 oxysterol binding protein-like 9 isoform b [Homo
           sapiens]
          Length = 571

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 33  NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 86

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 87  QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 119


>gi|22547167 oxysterol binding protein-like 9 isoform a [Homo
           sapiens]
          Length = 558

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 20  NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 73

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 74  QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 106


>gi|22547165 oxysterol binding protein-like 9 isoform a [Homo
           sapiens]
          Length = 558

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 200 NPLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCLMASPSEEEPRPREDDV-PFTARVGGR 258
           NP+    Q + L  ++  M  + +L      +C      + E RP    V P  A +G  
Sbjct: 20  NPVDAIYQPSPLEPVISTMPSQTVLPPEPVQLC------KSEQRPSSLPVGPVLATLGHH 73

Query: 259 SLSTPNALSFG-SPTSSDDMTLTSPSMDNSSAELLP 293
              TPN+   G SP SS   +LTSPS  N S   +P
Sbjct: 74  QTPTPNSTGSGHSPPSS---SLTSPSHVNLSPNTVP 106


>gi|49472835 bridging integrator 2 [Homo sapiens]
          Length = 565

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 235 ASPSEEEPRPREDDVPFTARVGGRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPS 294
           ++P    P PR    P  +   G   S+P A   GSPTS      T  +   +S E+ P+
Sbjct: 411 SAPPSRPPPPRATASPRPS--SGNIPSSPTASGGGSPTSPRASLGTGTASPRTSLEVSPN 468

Query: 295 GDSPLNQRMTENLLASLSEHERAAILSVPAAQNPEDL 331
            + P     T     + + H           QNPE+L
Sbjct: 469 PEPPEKPVRTPEAKENENIHN----------QNPEEL 495


>gi|47933339 RNA binding motif protein 15 [Homo sapiens]
          Length = 977

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 16/89 (17%)

Query: 243 RPREDDVPFTARVGGRSLSTPN--ALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLN 300
           +P+ D+V    +V G     PN  A+    P SSD  + +S +  +++            
Sbjct: 839 QPKLDEVTRRIKVAG-----PNGYAILLAVPGSSDSRSSSSSAASDTATS---------T 884

Query: 301 QRMTENLLASLSEHERAAILSVPAAQNPE 329
           QR   NL++ L + + A ++S+P   N +
Sbjct: 885 QRPLRNLVSYLKQKQAAGVISLPVGGNKD 913


>gi|105990532 apolipoprotein B precursor [Homo sapiens]
          Length = 4563

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 32/153 (20%)

Query: 76   IRPYHALLLLSDEKSLLGELPIDCSPAL--VRVIKTTSAVKNLQQLAQDADLALLQVFQL 133
            +R +  + ++S  + LL +L  +       ++ +KTT  ++NLQ L Q            
Sbjct: 4257 LRKHKLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQ------------ 4304

Query: 134  AAHLVYWGKAIIIYPLCENNVYMLSPNASVCLYSPLAEQFSHQFPSHDLPSV--LAKFSL 191
                        I+ L E+N+  L       L + + ++ +  F  + +P V  L K +L
Sbjct: 4305 -----------FIFQLIEDNIKQLKEMKFTYLINYIQDEINTIFSDY-IPYVFKLLKENL 4352

Query: 192  PVSLSEF----RNPLAPAVQETQLIQMVVWMLQ 220
             ++L +F    +N L  A QE Q I   +  L+
Sbjct: 4353 CLNLHKFNEFIQNELQEASQELQQIHQYIMALR 4385


>gi|149944548 neurobeachin-like 2 [Homo sapiens]
          Length = 2754

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 242  PRPREDDVPFTARVGGRSLSTPNALSFGS---PT-SSDDMTLTSPSMDNSSAEL 291
            P P +   PF A  G  S S  N L  GS   PT S DD + TS     S  EL
Sbjct: 1389 PSPLDGPRPFPAAPGRHSSSLSNVLEDGSLPEPTISGDDTSNTSNPQQTSEEEL 1442


>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
            sapiens]
          Length = 1482

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 21/89 (23%), Positives = 39/89 (43%)

Query: 257  GRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHER 316
            G S+++P  ++ G  +  + ++   P +     EL  +  +PL + M E  L  ++  E 
Sbjct: 1284 GDSVTSPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDEN 1343

Query: 317  AAILSVPAAQNPEDLRMFARLLHYFRGRH 345
             +I  +  A  P DL     LL   +  H
Sbjct: 1344 HSIWQLLQAGQPPDLDRIRTLLELEKFEH 1372


>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
            sapiens]
          Length = 1539

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 21/89 (23%), Positives = 39/89 (43%)

Query: 257  GRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHER 316
            G S+++P  ++ G  +  + ++   P +     EL  +  +PL + M E  L  ++  E 
Sbjct: 1341 GDSVTSPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDEN 1400

Query: 317  AAILSVPAAQNPEDLRMFARLLHYFRGRH 345
             +I  +  A  P DL     LL   +  H
Sbjct: 1401 HSIWQLLQAGQPPDLDRIRTLLELEKFEH 1429


>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
            sapiens]
          Length = 1570

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 21/89 (23%), Positives = 39/89 (43%)

Query: 257  GRSLSTPNALSFGSPTSSDDMTLTSPSMDNSSAELLPSGDSPLNQRMTENLLASLSEHER 316
            G S+++P  ++ G  +  + ++   P +     EL  +  +PL + M E  L  ++  E 
Sbjct: 1372 GDSVTSPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDEN 1431

Query: 317  AAILSVPAAQNPEDLRMFARLLHYFRGRH 345
             +I  +  A  P DL     LL   +  H
Sbjct: 1432 HSIWQLLQAGQPPDLDRIRTLLELEKFEH 1460


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,283,004
Number of Sequences: 37866
Number of extensions: 686345
Number of successful extensions: 1868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1857
Number of HSP's gapped (non-prelim): 43
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.