Guide to the Human Genome
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Name: PHKA1 Sequence: fasta or formatted (1223aa) NCBI GI: 169881273
Description:

phosphorylase kinase, alpha 1 (muscle) isoform 1

Referenced in:

Glycogen

Other entries for this name:
alt prot [1210aa] phosphorylase kinase, alpha 1 (muscle) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         81           3
 C cysteine            1.5         18           2
 D aspartate           5.4         66           2
 E glutamate           6.8         83           2
 F phenylalanine       3.1         38           1
 G glycine             6.1         74           2
 H histidine           2.8         34           2
 I isoleucine          5.3         65           2
 K lysine              5.1         62           2
 L leucine            11.4        139           2
 M methionine          2.9         36           1
 N asparagine          2.8         34           2
 P proline             4.7         58           2
 Q glutamine           5.2         63           3
 R arginine            5.1         62           4
 S serine              8.2        100           2
 T threonine           5.6         69           2
 V valine              6.5         80           3
 W tryptophan          1.1         13           1
 Y tyrosine            3.9         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphorylase kinase, alpha 1 (muscle) isoform 1 [H... 
PHKA1                 0.987   phosphorylase kinase, alpha 1 (muscle) isoform 2 [H...
PHKA2                 0.685   phosphorylase kinase, alpha 2 (liver) 
PHKB                  0.190   phosphorylase kinase, beta isoform b 
PHKB                  0.190   phosphorylase kinase, beta isoform a 
SAPS1                 0.004   SAPS domain family, member 1 
PNN                   0.003   pinin, desmosome associated protein 
FAM186A               0.003   family with sequence similarity 186, member A [Homo...
ZYX                   0.002   zyxin 
ZYX                   0.002   zyxin 
OR2K2                 0.002   olfactory receptor, family 2, subfamily K, member 2 ...
EWSR1                 0.002   Ewing sarcoma breakpoint region 1 isoform 5 
EWSR1                 0.002   Ewing sarcoma breakpoint region 1 isoform 4 
EWSR1                 0.002   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.002   Ewing sarcoma breakpoint region 1 isoform 1 
EWSR1                 0.002   Ewing sarcoma breakpoint region 1 isoform 2 
C16orf35              0.002   conserved gene telomeric to alpha globin cluster is...
C16orf35              0.002   conserved gene telomeric to alpha globin cluster iso...
OR5AS1                0.002   olfactory receptor, family 5, subfamily AS, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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