BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] (558 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] 1157 0.0 gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] 896 0.0 gi|13375756 occludin/ELL domain containing 1 [Homo sapiens] 119 6e-27 gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] 91 4e-18 gi|5729812 elongation factor RNA polymerase II [Homo sapiens] 89 1e-17 gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 74 4e-13 gi|4505487 occludin [Homo sapiens] 70 5e-12 gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 42 0.001 gi|38569495 ELL associated factor 1 [Homo sapiens] 42 0.001 gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 40 0.004 gi|221219020 NYD-SP11 protein [Homo sapiens] 38 0.028 gi|7705755 plasmolipin [Homo sapiens] 38 0.028 gi|5902148 uroplakin 1A [Homo sapiens] 37 0.037 gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 37 0.037 gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 37 0.048 gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 37 0.062 gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 37 0.062 gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 37 0.062 gi|187761324 shootin1 isoform a [Homo sapiens] 35 0.14 gi|18426913 drebrin 1 isoform b [Homo sapiens] 35 0.24 gi|18426915 drebrin 1 isoform a [Homo sapiens] 35 0.24 gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 34 0.31 gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 34 0.31 gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap... 34 0.31 gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 34 0.31 gi|50083293 coiled-coil domain containing 123 [Homo sapiens] 34 0.31 gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat... 34 0.40 gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat... 34 0.40 gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat... 34 0.40 gi|18959210 WIRE protein [Homo sapiens] 34 0.40 >gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] Length = 558 Score = 1157 bits (2994), Expect = 0.0 Identities = 558/558 (100%), Positives = 558/558 (100%) Query: 1 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD 60 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD Sbjct: 1 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD 60 Query: 61 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS 120 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS Sbjct: 61 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS 120 Query: 121 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN 180 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN Sbjct: 121 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN 180 Query: 181 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG 240 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG Sbjct: 181 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG 240 Query: 241 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL 300 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL Sbjct: 241 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL 300 Query: 301 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL 360 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL Sbjct: 301 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL 360 Query: 361 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK 420 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK Sbjct: 361 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK 420 Query: 421 PELLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVL 480 PELLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVL Sbjct: 421 PELLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVL 480 Query: 481 RKFDELDAVMSRLPHHSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIK 540 RKFDELDAVMSRLPHHSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIK Sbjct: 481 RKFDELDAVMSRLPHHSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIK 540 Query: 541 QRIQEYDKVMNWDVQGYS 558 QRIQEYDKVMNWDVQGYS Sbjct: 541 QRIQEYDKVMNWDVQGYS 558 >gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] Length = 457 Score = 896 bits (2316), Expect = 0.0 Identities = 430/430 (100%), Positives = 430/430 (100%) Query: 1 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD 60 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD Sbjct: 1 MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPILHDSERAVSADPLPPPPLPLQPPFGPD 60 Query: 61 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS 120 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS Sbjct: 61 FYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPAS 120 Query: 121 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN 180 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN Sbjct: 121 PARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYN 180 Query: 181 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG 240 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG Sbjct: 181 LRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLG 240 Query: 241 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL 300 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL Sbjct: 241 SMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVAL 300 Query: 301 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL 360 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL Sbjct: 301 FILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISAL 360 Query: 361 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK 420 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK Sbjct: 361 VCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMK 420 Query: 421 PELLSGHIPP 430 PELLSGHIPP Sbjct: 421 PELLSGHIPP 430 >gi|13375756 occludin/ELL domain containing 1 [Homo sapiens] Length = 264 Score = 119 bits (299), Expect = 6e-27 Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 3/161 (1%) Query: 389 SSKRKMCEMATSGDRQRDSEVNFKE--LRTAKMKPELLSGHIPPGHIPKPIVMPDYVAKY 446 S+ R C+ + + ++ F++ L A + + G IP GH P+P +PDY KY Sbjct: 94 SAPRPPCQPQPGPHKAKTKKIVFEDELLSQALLGAKKPIGAIPKGHKPRPHPVPDYELKY 153 Query: 447 PVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRLPHHSESRQEHERI 506 P + ++ ER RY AVFQDQ+ E+ EL EV K +L+A++S LP +S++E + Sbjct: 154 PPVSSERERSRYVAVFQDQYGEFLELQHEVGCAQAKLRQLEALLSSLP-PPQSQKEAQVA 212 Query: 507 SRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 547 +R+ EF+ K+ DP FL+K+ RC YLK KL H+K +IQ++D Sbjct: 213 ARVWREFEMKRMDPGFLDKQARCHYLKGKLRHLKTQIQKFD 253 >gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] Length = 640 Score = 90.5 bits (223), Expect = 4e-18 Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 17/169 (10%) Query: 381 QEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGHIPKPIVMP 440 + I E KR+ E+A + +S KE TA M+P + +P Sbjct: 481 ETIEEKEEDLKREE-EIAKLNNSSPNSSGGVKEDCTASMEPSAIE-------------LP 526 Query: 441 DYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRL-PHHSES 499 DY+ KY I + ++R+ YK F ++ EY+ L A ++ V R+F +LDA RL P E Sbjct: 527 DYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSKEY 586 Query: 500 RQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDK 548 + HE + + E K K++ P + E+K RC+YL NKL+HIK+ I E+D+ Sbjct: 587 QNVHEEV--LQEYQKIKQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQ 633 >gi|5729812 elongation factor RNA polymerase II [Homo sapiens] Length = 621 Score = 89.0 bits (219), Expect = 1e-17 Identities = 43/111 (38%), Positives = 75/111 (67%), Gaps = 5/111 (4%) Query: 440 PDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRLPHHSES 499 PDY+ KY I + ++R+ YK F ++SEY++L A ++ + R+F +LDA + +L S+ Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQL---SQG 563 Query: 500 RQEHERI-SRIHEEFKK-KKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDK 548 +E+E +I +E++K KK + + ++K RC+YL +KL+HIK+ I EYD+ Sbjct: 564 SEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHSKLAHIKRLIAEYDQ 614 >gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sapiens] Length = 397 Score = 73.9 bits (180), Expect = 4e-13 Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 3/116 (2%) Query: 434 PKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSRL 493 P P +PDY+ +Y I + +++ Y+ F+ ++EY+ L A V ++F EL A + R+ Sbjct: 279 PSPEDIPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKRV 338 Query: 494 PHHSESRQEHERISRIHEEFKK-KKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDK 548 + + E +I +E+KK +K P++ E+K RC+YL KLSHIK I E+++ Sbjct: 339 RRGTPEYKVLE--DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEE 392 >gi|4505487 occludin [Homo sapiens] Length = 522 Score = 70.1 bits (170), Expect = 5e-12 Identities = 117/540 (21%), Positives = 203/540 (37%), Gaps = 130/540 (24%) Query: 113 VECSPPASPA--RPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVR 170 +E PP P +PNH +P N D YGG R + Sbjct: 6 LESPPPYRPDEFKPNHYAPSN---DIYGGEMHV--------------------RPMLSQP 42 Query: 171 TYSEKVEEYNLRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEW-YNLFGYS- 228 YS E+ L + S G++RIL ++ +++ +FACV + + D + +L G S Sbjct: 43 AYSFYPEDEILHFYKWTSPPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGTSLLGGSV 102 Query: 229 -QPYGMGGVGGLGSMYG-----GYYYTGPKTP-----FVLVVAGLAWITTIIILVLGMSM 277 PYG G G GS YG GY Y G P F+L +A +I ++I V + Sbjct: 103 GYPYGGSGFGSYGSGYGYGYGYGYGYGGYTDPRAAKGFMLAMAAFCFIAALVIFVTSV-- 160 Query: 278 YYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAV---- 333 R+ + + + L+ ++ L I+ A IVY+ N L+ + + A+ Sbjct: 161 -IRSEMSRTRRYYLSVIIVSAILGIMVFIATIVYIMGVNPTAQSSGSLYGSQIYALCNQF 219 Query: 334 ----------------FCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWRH-EAARRHRE 376 +C V+ + A++ F+ ++ + + +K R + + Sbjct: 220 YTPAATGLYVDQYLYHYCVVDPQEAIAIVLGFMIIVAFALIIFFAVKTRRKMDRYDKSNI 279 Query: 377 YMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIP-----PG 431 +++ I + + + + ++G + S + R +G + P Sbjct: 280 LWDKEHIYDEQPPNVEEWVKNVSAGTQDVPSPPSDYVERVDSPMAYSSNGKVNDKRFYPE 339 Query: 432 HIPKPIVMPDYVAKYPVIQ-TDDERE-----------------------RYKAVFQDQFS 467 K +P+ V + P+ DD R+ R K QD + Sbjct: 340 SSYKSTPVPEVVQELPLTSPVDDFRQPRYSSGGNFETPSKRAPAKGRAGRSKRTEQDHYE 399 Query: 468 -------------------EYKELSAEVQAVL--RKFD-----------ELDAV---MSR 492 EY ++++ Q L R FD ELD + +SR Sbjct: 400 TDYTTGGESCDELEEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSELDEINKELSR 459 Query: 493 LPHH-SESRQEHERISRIHEEF---KKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYDK 548 L + R+E E +E+ K+ K + KK C LK+KLSHIK+ + +YD+ Sbjct: 460 LDKELDDYREESEEYMAAADEYNRLKQVKGSADYKSKKNHCKQLKSKLSHIKKMVGDYDR 519 >gi|84043963 eukaryotic translation initiation factor 5B [Homo sapiens] Length = 1220 Score = 42.4 bits (98), Expect = 0.001 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 21/189 (11%) Query: 369 EAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHI 428 E R R+ ++++ L K ++ +Q++S+ F+E T K K + +G I Sbjct: 234 EKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEE-ETVKSKVTVDTGVI 292 Query: 429 PPGHIPKPIVMPDYVAKYPVIQTDD------ERERYKAVFQDQFSEYKELSAEVQAVLRK 482 P + A+ P DD ++++ K + + E ++ +A ++ Sbjct: 293 PAS---------EEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKA 343 Query: 483 FDELDAVMSRLPHHSESRQEHERISRIHE-EFKKKKNDPTFLEKKERCDYLKNKLSHIKQ 541 E A + + R+E ERI R+ E E K+K+ + EK+ER K K K+ Sbjct: 344 MQEALAKLKE-EEERQKREEEERIKRLEELEAKRKEEERLEQEKRER---KKQKEKERKE 399 Query: 542 RIQEYDKVM 550 R+++ K++ Sbjct: 400 RLKKEGKLL 408 >gi|38569495 ELL associated factor 1 [Homo sapiens] Length = 268 Score = 42.0 bits (97), Expect = 0.001 Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 12/101 (11%) Query: 42 SADPLPPPPLPLQ----PPFGPDFYSSDTEEPAIAPDLKPVRRF------VPDSWKNFFR 91 S P PPPP+P + PP GP S + P+ P L ++R + + + Sbjct: 134 SQPPPPPPPMPFRAPTKPPVGPKT-SPLKDNPSPEPQLDDIKRELRAEVDIIEQMSSSSG 192 Query: 92 GKKKDPEWDKPVSDIRYISDGVECSPPASPARPNHRSPLNS 132 D E SD S G E + PASP +P+H+ P NS Sbjct: 193 SSSSDSE-SSSGSDDDSSSSGGEDNGPASPPQPSHQQPYNS 232 >gi|34878904 synaptonemal complex protein 1 [Homo sapiens] Length = 976 Score = 40.4 bits (93), Expect = 0.004 Identities = 30/159 (18%), Positives = 74/159 (46%), Gaps = 13/159 (8%) Query: 363 LKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPE 422 +K W+ R+ + + N + ++RK + G+ + V+ K + + Sbjct: 116 IKKWKVSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEK----VSLKLEEGIQENKD 171 Query: 423 LLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRK 482 L+ + H+ + K ++ ++ ++Y+ ++ Y +L+ ++ ++ Sbjct: 172 LIKENNATRHLCN-------LLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITA 224 Query: 483 FDEL--DAVMSRLPHHSESRQEHERISRIHEEFKKKKND 519 F+EL A SRL H + ++++E+I + +E+KK+ ND Sbjct: 225 FEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEIND 263 >gi|221219020 NYD-SP11 protein [Homo sapiens] Length = 2873 Score = 37.7 bits (86), Expect = 0.028 Identities = 36/179 (20%), Positives = 80/179 (44%), Gaps = 9/179 (5%) Query: 379 EQQEINEPSLSSKRKMCEMATSGDRQ--RDSEVNFKELRTAKMKPELLSGHIPPGHIPKP 436 ++ E+ + RK ++A R ++ ++ +E + A+ E++ G I + Sbjct: 2128 KRSELTKDEKKLARKQRKLANKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGGIEEE 2187 Query: 437 IVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKE---LSAEVQAVLRKFDELDAVMSRL 493 V+P ++ + ++ K F Q E + S E++++L + ++ +++ S Sbjct: 2188 EVIPFLKRRWRKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEE 2247 Query: 494 PHHSESRQEHERISRIHEEFKKKKNDPTFLEK---KERCDYLKNKLSHIKQRIQEYDKV 549 E +E E + EE +++K + EK KE + K K K+ +QE ++V Sbjct: 2248 EEEREEEEEREE-EEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEV 2305 >gi|7705755 plasmolipin [Homo sapiens] Length = 182 Score = 37.7 bits (86), Expect = 0.028 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 14/121 (11%) Query: 247 YYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMA 306 Y+ P +V+ VA W+ TI++ L + + + + WPL N++ +LY+ Sbjct: 60 YHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVP--WPLVLMIFNISATVLYIT 117 Query: 307 AAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLW 366 A I C + T + R + AA F + MI Y +SA + W Sbjct: 118 AFIA----------CSAAVDLTSLRGT--RPYNQRAAASFFACLVMIAYGVSAFFSYQAW 165 Query: 367 R 367 R Sbjct: 166 R 166 >gi|5902148 uroplakin 1A [Homo sapiens] Length = 258 Score = 37.4 bits (85), Expect = 0.037 Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 24/152 (15%) Query: 258 VVAGLAWITTIIILVLGMSMYYRTILLDSNW---WPLTEFGINVALFILYMAAAIVYVND 314 VV GL + IIIL+ G+S++ TI + ++ +PL G++ + A ++ Sbjct: 15 VVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPL--MGVSGKDDVFAGAWIAIFC-- 70 Query: 315 TNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWRHEAARRH 374 G ++ + + V A CR + + +L + +IVY+ C+ + H Sbjct: 71 ----GFSFFMVASFGVGAALCR---RRSMVLTYLVLMLIVYIFECASCI------TSYTH 117 Query: 375 REYMEQQEINEPSLSSKRKMCEMATSGDRQRD 406 R+YM ++ PSL +K+ + + D+ ++ Sbjct: 118 RDYM----VSNPSLITKQMLTFYSADTDQGQE 145 >gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] Length = 410 Score = 37.4 bits (85), Expect = 0.037 Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 37/209 (17%) Query: 195 ILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLGSMYGGYY------- 247 ++ +VE++L V C+ A ++ L G+S + GG G G+ Y + Sbjct: 200 VVQIVEVVLNGMVLICIVA------SYFVLAGFSASFSSGG--GFGNNYYSPFEGTELEQ 251 Query: 248 -------YTGPKTPFVLVVAGLAWITTIIILVLGMSMY---YRTILLDSNWWPLTEFGIN 297 YT ++P L+ G+A + +L +G+ + RT+L S W LTE + Sbjct: 252 VRQLDQQYTILRSP--LIYGGVAVSLGLGVLTMGVLLQGAKSRTML--SGKWLLTEAAFS 307 Query: 298 VALFILYMAAAIVY------VNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVT 351 + + Y VY +N T+ + + C++ G AA F + Sbjct: 308 LLAAVGYCTGIGVYLHVALQINSTDTCKTRERLYARKGLTWMDCQLAGTDGAAATFACLL 367 Query: 352 MIVYLISALVCLKLWRHEAARRHREYMEQ 380 +I+Y S ++ L+ +R + +R++ EQ Sbjct: 368 VIMYGASVVLALRSYREQ--KRYKGSREQ 394 >gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [Homo sapiens] Length = 173 Score = 37.0 bits (84), Expect = 0.048 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 244 GGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFIL 303 G Y+ P +V+ VA W+ T+ L++ ++M Y I W N + F+L Sbjct: 61 GTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTRI--PQVPWTTVGLCFNGSAFVL 118 Query: 304 YMAAAIV 310 Y++AA+V Sbjct: 119 YLSAAVV 125 >gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2790 Score = 36.6 bits (83), Expect = 0.062 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 3 NDGRSRNRDRRYDEVPSDLPYQDTTIRT--HPILHDSERAVSADPLPPPPLPLQPPFGPD 60 +DG R +R E P+ PY T+ + P L + A + P P PPLPL PP P Sbjct: 2169 DDGTGREAPKR--EAPA-FPYPTATLASGPQPFLPPGKEATT--PTPEPPLPLLPPPPPS 2223 Query: 61 FYSSDTEEPAIAPD 74 E P +P+ Sbjct: 2224 EEEGPEEPPKASPE 2237 >gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 36.6 bits (83), Expect = 0.062 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 3 NDGRSRNRDRRYDEVPSDLPYQDTTIRT--HPILHDSERAVSADPLPPPPLPLQPPFGPD 60 +DG R +R E P+ PY T+ + P L + A + P P PPLPL PP P Sbjct: 2085 DDGTGREAPKR--EAPA-FPYPTATLASGPQPFLPPGKEATT--PTPEPPLPLLPPPPPS 2139 Query: 61 FYSSDTEEPAIAPD 74 E P +P+ Sbjct: 2140 EEEGPEEPPKASPE 2153 >gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 36.6 bits (83), Expect = 0.062 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 3 NDGRSRNRDRRYDEVPSDLPYQDTTIRT--HPILHDSERAVSADPLPPPPLPLQPPFGPD 60 +DG R +R E P+ PY T+ + P L + A + P P PPLPL PP P Sbjct: 2085 DDGTGREAPKR--EAPA-FPYPTATLASGPQPFLPPGKEATT--PTPEPPLPLLPPPPPS 2139 Query: 61 FYSSDTEEPAIAPD 74 E P +P+ Sbjct: 2140 EEEGPEEPPKASPE 2153 >gi|187761324 shootin1 isoform a [Homo sapiens] Length = 631 Score = 35.4 bits (80), Expect = 0.14 Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 35/170 (20%) Query: 15 DEVPSDLPYQDTTIRTHPILHD----------SERAVSADPLPPPPLPLQPPFGPDFYSS 64 D+ +L YQ++ + + H SE +V P PPPPLP PP Sbjct: 316 DKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPP-------- 367 Query: 65 DTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIR---------YISDGVEC 115 I + +R+ S + K PE + V+D++ I GV Sbjct: 368 ----NPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKGVHL 423 Query: 116 SPPASPARPNHR----SPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGS 161 P ARP + S D G GT + + ++ DP S Sbjct: 424 RPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENS 473 >gi|18426913 drebrin 1 isoform b [Homo sapiens] Length = 651 Score = 34.7 bits (78), Expect = 0.24 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 17/76 (22%) Query: 17 VPSDLPYQDTTIRTHPILHDSERAVSA------DPLPPPPLPLQPPFGPDFYSSDTEEPA 70 +P+ P +T T P+ ERA+ PLPPPP P Q +T+EP+ Sbjct: 335 IPTRSPSDSSTAST-PVAEQIERALDEVTSSQPPPLPPPPPPAQ----------ETQEPS 383 Query: 71 IAPDLKPVRRFVPDSW 86 D + R P +W Sbjct: 384 PILDSEETRAAAPQAW 399 >gi|18426915 drebrin 1 isoform a [Homo sapiens] Length = 649 Score = 34.7 bits (78), Expect = 0.24 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 17/76 (22%) Query: 17 VPSDLPYQDTTIRTHPILHDSERAVSA------DPLPPPPLPLQPPFGPDFYSSDTEEPA 70 +P+ P +T T P+ ERA+ PLPPPP P Q +T+EP+ Sbjct: 333 IPTRSPSDSSTAST-PVAEQIERALDEVTSSQPPPLPPPPPPAQ----------ETQEPS 381 Query: 71 IAPDLKPVRRFVPDSW 86 D + R P +W Sbjct: 382 PILDSEETRAAAPQAW 397 >gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like [Homo sapiens] Length = 828 Score = 34.3 bits (77), Expect = 0.31 Identities = 38/193 (19%), Positives = 79/193 (40%), Gaps = 10/193 (5%) Query: 364 KLWRHEAARRHREYMEQQEINEPSLSSKRKMCE----MATSGDRQRDSEVNFKELRTAKM 419 K+WR E R + M +QE E ++KM + M +R R+ E +E + Sbjct: 474 KMWRQEKMREQEDQMWEQE--EKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQ 531 Query: 420 KPELLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAV 479 + E + K D K + ERE+ ++ E +E E + Sbjct: 532 QEEKMREEKKTQEQEKKTW--DQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEK 589 Query: 480 LRKFDELDAVMSRLPHHSESR--QEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLS 537 +R+ +E E + ++ E++ EE K ++ + E++E+ + K+ Sbjct: 590 MREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMW 649 Query: 538 HIKQRIQEYDKVM 550 +++++E ++ M Sbjct: 650 EQEEKMREQEEKM 662 >gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sapiens] Length = 676 Score = 34.3 bits (77), Expect = 0.31 Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 12/117 (10%) Query: 438 VMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKEL------SAEVQAVLRKFDE-LDAVM 490 V +++ V T+ + E F+ EY++L +AE++ + +E D ++ Sbjct: 127 VPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLI 186 Query: 491 SRLPH---HSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQ 544 R+ H E+ Q H+ + +I + + +K +L ++++ KN+L H QR+Q Sbjct: 187 KRVEHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQ--EQKNQLFHAVQRLQ 241 >gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sapiens] Length = 431 Score = 34.3 bits (77), Expect = 0.31 Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 12/117 (10%) Query: 438 VMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKEL------SAEVQAVLRKFDE-LDAVM 490 V +++ V T+ + E F+ EY++L +AE++ + +E D ++ Sbjct: 127 VPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLI 186 Query: 491 SRLPH---HSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQ 544 R+ H E+ Q H+ + +I + + +K +L ++++ KN+L H QR+Q Sbjct: 187 KRVEHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQ--EQKNQLFHAVQRLQ 241 >gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sapiens] Length = 676 Score = 34.3 bits (77), Expect = 0.31 Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 12/117 (10%) Query: 438 VMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKEL------SAEVQAVLRKFDE-LDAVM 490 V +++ V T+ + E F+ EY++L +AE++ + +E D ++ Sbjct: 127 VPSEFLQDETVADTNKQYEELMEAFKTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLI 186 Query: 491 SRLPH---HSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQ 544 R+ H E+ Q H+ + +I + + +K +L ++++ KN+L H QR+Q Sbjct: 187 KRVEHLKKRVETAQNHQWMLKIARQLRVEKEREEYLAQQKQ--EQKNQLFHAVQRLQ 241 >gi|50083293 coiled-coil domain containing 123 [Homo sapiens] Length = 783 Score = 34.3 bits (77), Expect = 0.31 Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 3/188 (1%) Query: 363 LKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPE 422 L L + E +R + Q+ + E S +K+ M A + ++++ N ++L + K + Sbjct: 439 LLLEQLEIQQRKAKDSHQERLQEVSKLTKQLMLLEAKTHGQEKELAENREQLEILRAKCQ 498 Query: 423 LLSGHIPPGHIPKPIVMPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRK 482 L H G I + + + Q E E+ +A ++ + L A+ +++L + Sbjct: 499 ELKTH-SDGKIA--VEVHKSIVNELKSQLQKEEEKERAEMEELMEKLTVLQAQKKSLLLE 555 Query: 483 FDELDAVMSRLPHHSESRQEHERISRIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQR 542 + L L E Q+ R S+ E KK+ + + YL N + + Sbjct: 556 KNSLTEQNKALEAELERAQKINRKSQKKIEVLKKQVEKAMGNEMSAHQYLANLVGLAENI 615 Query: 543 IQEYDKVM 550 QE D +M Sbjct: 616 TQERDSLM 623 >gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform a [Homo sapiens] Length = 629 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Query: 45 PLPPPPLPLQPPFGPDFYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKP-- 102 P PP PL+P G D + PA A L +P + + G+ P P Sbjct: 505 PQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPR--YLGRPPSPTSPPPPE 562 Query: 103 VSDIRYISDGVECSPPASPARPNH 126 + D+ + +CSPP P H Sbjct: 563 LMDVSLVGGPADCSPPHPAPAPQH 586 >gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform c [Homo sapiens] Length = 601 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Query: 45 PLPPPPLPLQPPFGPDFYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKP-- 102 P PP PL+P G D + PA A L +P + + G+ P P Sbjct: 477 PQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPR--YLGRPPSPTSPPPPE 534 Query: 103 VSDIRYISDGVECSPPASPARPNH 126 + D+ + +CSPP P H Sbjct: 535 LMDVSLVGGPADCSPPHPAPAPQH 558 >gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B isoform b [Homo sapiens] Length = 589 Score = 33.9 bits (76), Expect = 0.40 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%) Query: 45 PLPPPPLPLQPPFGPDFYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKP-- 102 P PP PL+P G D + PA A L +P + + G+ P P Sbjct: 465 PQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPR--YLGRPPSPTSPPPPE 522 Query: 103 VSDIRYISDGVECSPPASPARPNH 126 + D+ + +CSPP P H Sbjct: 523 LMDVSLVGGPADCSPPHPAPAPQH 546 >gi|18959210 WIRE protein [Homo sapiens] Length = 440 Score = 33.9 bits (76), Expect = 0.40 Identities = 13/28 (46%), Positives = 19/28 (67%) Query: 47 PPPPLPLQPPFGPDFYSSDTEEPAIAPD 74 PPPP P PP P F+ ++TE+P ++ D Sbjct: 5 PPPPPPPGPPPPPTFHQANTEQPKLSRD 32 Score = 30.0 bits (66), Expect = 5.8 Identities = 40/161 (24%), Positives = 57/161 (35%), Gaps = 30/161 (18%) Query: 47 PPPPLPLQPPFGPDFYSSDTEEPAIAPDLK------------PVRRFVP----DSWKNFF 90 PPPP QPP P+ SS T E AP+L PVR P + + Sbjct: 250 PPPPPYRQPPGVPNGPSSPTNES--APELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLL 307 Query: 91 RGKKKDPEWDKPVSDIR------YISDGVECSPPASPARPNHRSPLNSCKDPYGGSEGTF 144 + P D P I +G +PP P H S + P G Sbjct: 308 SNRPPPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGS-----EPPSRGKPPPP 362 Query: 145 SSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYNLRYSY 185 SR A P P + H ++ T ++++ +YS+ Sbjct: 363 PSRTPAGPP-PPPPPPLRNGHRDSITTVRSFLDDFESKYSF 402 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.137 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,112,998 Number of Sequences: 37866 Number of extensions: 1238542 Number of successful extensions: 8029 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 144 Number of HSP's that attempted gapping in prelim test: 7622 Number of HSP's gapped (non-prelim): 470 length of query: 558 length of database: 18,247,518 effective HSP length: 107 effective length of query: 451 effective length of database: 14,195,856 effective search space: 6402331056 effective search space used: 6402331056 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.