EAF1 27088

Name: EAF1	Sequence: fasta or formatted (268aa)		NCBI GI: 38569495
Description: ELL associated factor 1		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 10 1 C cysteine 1.1 3 1 D aspartate 7.1 19 3 E glutamate 6.7 18 2 F phenylalanine 1.9 5 1 G glycine 6.7 18 2 H histidine 1.9 5 1 I isoleucine 4.1 11 2 K lysine 5.2 14 2 L leucine 6.0 16 2 M methionine 2.2 6 1 N asparagine 4.1 11 1 P proline 12.7 34 7 Q glutamine 6.0 16 2 R arginine 5.6 15 1 S serine 14.6 39 4 T threonine 5.6 15 1 V valine 3.4 9 1 W tryptophan 0.0 0 0 Y tyrosine 1.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ELL associated factor 1 EAF2 0.447 ELL associated factor 2 SRRM2 0.059 splicing coactivator subunit SRm300 HTT 0.050 huntingtin NR1D1 0.046 nuclear receptor subfamily 1, group D, member 1 [Hom... BAT2 0.046 HLA-B associated transcript-2 AFF1 0.046 myeloid/lymphoid or mixed-lineage leukemia trithorax ... CASKIN1 0.042 CASK interacting protein 1 POU6F2 0.042 POU domain, class 6, transcription factor 2 MEX3D 0.042 ring finger and KH domain containing 1 SCAF1 0.042 SR-related CTD-associated factor 1 HECW2 0.042 HECT, C2 and WW domain containing E3 ubiquitin prote... LOC100133142 0.040 PREDICTED: similar to zinc finger protein 208 [Homo... LOC100133142 0.040 PREDICTED: similar to zinc finger protein 208 [Homo... LOC645529 0.040 PREDICTED: similar to Putative acrosin-like proteas... NOLC1 0.040 nucleolar and coiled-body phosphoprotein 1 EP400 0.040 E1A binding protein p400 ZC3H4 0.040 zinc finger CCCH-type containing 4 AFF3 0.038 AF4/FMR2 family, member 3 isoform 2 AFF3 0.038 AF4/FMR2 family, member 3 isoform 1 HNRNPUL1 0.038 heterogeneous nuclear ribonucleoprotein U-like 1 iso... HNRNPUL1 0.038 heterogeneous nuclear ribonucleoprotein U-like 1 iso... SETD1B 0.038 SET domain containing 1B SETD1A 0.038 SET domain containing 1A BSN 0.038 bassoon protein ACR 0.038 acrosin precursor TNRC18 0.036 trinucleotide repeat containing 18 NRG2 0.036 neuregulin 2 isoform 2 NRG2 0.036 neuregulin 2 isoform 4 NRG2 0.036 neuregulin 2 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.