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Search of human proteins with 83779010
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|83779010 SECIS binding protein 2 [Homo sapiens]
(854 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|83779010 SECIS binding protein 2 [Homo sapiens] 1705 0.0
gi|60685227 SECIS binding protein 2-like [Homo sapiens] 313 4e-85
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 48 3e-05
gi|193788653 hypothetical protein LOC100131897 [Homo sapiens] 45 4e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 6e-04
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 42 0.002
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 42 0.002
gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 42 0.003
gi|56676335 RAP1 interacting factor 1 [Homo sapiens] 42 0.003
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 41 0.004
gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens] 41 0.005
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 40 0.007
gi|83367077 mucin 16 [Homo sapiens] 40 0.007
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 40 0.009
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 40 0.009
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 40 0.009
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 40 0.012
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 39 0.016
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 39 0.016
gi|148746195 trichohyalin [Homo sapiens] 39 0.020
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.020
gi|154090979 hypothetical protein LOC57481 [Homo sapiens] 39 0.027
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 38 0.035
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 38 0.035
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 38 0.046
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 38 0.046
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 38 0.046
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 37 0.060
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 37 0.078
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 37 0.10
>gi|83779010 SECIS binding protein 2 [Homo sapiens]
Length = 854
Score = 1705 bits (4416), Expect = 0.0
Identities = 854/854 (100%), Positives = 854/854 (100%)
Query: 1 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT 60
MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT
Sbjct: 1 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVT 60
Query: 61 EQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYR 120
EQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYR
Sbjct: 61 EQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYR 120
Query: 121 GFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH 180
GFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH
Sbjct: 121 GFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHH 180
Query: 181 LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQP 240
LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQP
Sbjct: 181 LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQP 240
Query: 241 KWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPM 300
KWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPM
Sbjct: 241 KWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPM 300
Query: 301 GYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP 360
GYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP
Sbjct: 301 GYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP 360
Query: 361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRD 420
TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRD
Sbjct: 361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRD 420
Query: 421 RIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVG 480
RIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVG
Sbjct: 421 RIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVG 480
Query: 481 AVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKER 540
AVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKER
Sbjct: 481 AVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKER 540
Query: 541 QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEP 600
QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEP
Sbjct: 541 QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEP 600
Query: 601 PGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMY 660
PGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMY
Sbjct: 601 PGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMY 660
Query: 661 QKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACE 720
QKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACE
Sbjct: 661 QKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACE 720
Query: 721 QNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENV 780
QNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENV
Sbjct: 721 QNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENV 780
Query: 781 QQELVGEPRPQAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEE 840
QQELVGEPRPQAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEE
Sbjct: 781 QQELVGEPRPQAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEE 840
Query: 841 SLEASTSQMMNLNL 854
SLEASTSQMMNLNL
Sbjct: 841 SLEASTSQMMNLNL 854
>gi|60685227 SECIS binding protein 2-like [Homo sapiens]
Length = 1056
Score = 313 bits (802), Expect = 4e-85
Identities = 267/899 (29%), Positives = 410/899 (45%), Gaps = 98/899 (10%)
Query: 7 REPESEGIKLSADVKPFVPRFAGLNVAWLESS-----------EACVFPSSAATYYPFVQ 55
R P + +KLSA+V+PF+P+ + + + E PS T YPFVQ
Sbjct: 3 RAPTEQNVKLSAEVEPFIPQKKSPDTFMIPMALPNDNGSVSGVEPTPIPSYLITCYPFVQ 62
Query: 56 EPPVTEQ-KIYTEDMAF---GASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQY 111
E Q +Y D+ + + P + I+ P + YT + P +Q
Sbjct: 63 ENQSNRQFPLYNNDIRWQQPNPNPTGPYFAYPIISAQPPVSTEYTY---YQLMPAPCAQV 119
Query: 112 LYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSE 171
+ Y F T NT + A+ + T + S R+
Sbjct: 120 M----GFYHPFPTPY---SNTFQAANTVNAITTECTERPSQLGQVFPLSSHRS------- 165
Query: 172 IKSARGSHHLSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAEN 231
R S+ S+ + L + R + KNV+T K T P+ +
Sbjct: 166 ----RNSNRGSVVPKQQLLQQHI-----KSKRPLVKNVATQKE----TNAAGPDSRSKIV 212
Query: 232 NMSEIQKQPKWGPVHSVSTDIS--LLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSP 289
+ + +Q + +DI+ L E SKG ++P ++ +
Sbjct: 213 LLVDASQQTDF------PSDIANKSLSETTATMLWKSKGRRRRASHPTAESSSEQGASEA 266
Query: 290 SCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEA---LS 346
+ + + Q + L + + A + NV+ +++ +
Sbjct: 267 DIDSDSGYCSPKHSNNQPAAGALRNPDSGTMNHVESSMCAGGVNWSNVTCQATQKKPWME 326
Query: 347 SDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKY--------EVLTVQ 398
+ ++++ S+ G + K++ ++K +SK + VQ
Sbjct: 327 KNQTFSRGGRQTEQRNNSQDEDGFQELNENGNAKDENIQQKLSSKVLDDLPENSPINIVQ 386
Query: 399 EP-------PRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLD 451
P P+ +++ LA A + K+ + K KK++ PVQLD
Sbjct: 387 TPIPITTSVPKRAKSQKKKALAAALATAQEYSEISMEQKKLQEALSKAAGKKNKTPVQLD 446
Query: 452 LGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMK---TPHNPL 508
LG ML ALEK+Q + A+Q + +S V S + +++ + T N +
Sbjct: 447 LGDMLAALEKQQQAMKARQITNTRPLSYTVVTAASFHTKDSTNRKPLTKSQPCLTSFNSV 506
Query: 509 DSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENAVSPAFTSDDTQDGESGG 568
D ++ KKGK++EI K K+PT+LKK+ILKER+E+K RL + S++ +
Sbjct: 507 DIASSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVD--HNLLGSEEPTEMHLDF 564
Query: 569 DDQFPEQAELSGPEGMDELISTPSVEDKSEEPPG--TELQRDTEASHLAPN---HTTFPK 623
D P++ G+ + S S+ S+ P T + + + AS + +T K
Sbjct: 565 IDDLPQEIVSQEDTGLS-MPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITK 623
Query: 624 IHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKRRLVLGLREVLKH 683
IHS+RFR+YC+Q+L KE+D CVT LL+ELV FQ+R+YQKDPV+AK +RRLV+GLREV KH
Sbjct: 624 IHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKH 683
Query: 684 LKLKKLKCVIISPNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVP 743
+KL K+KCVIISPNCEKIQSKGGLD+ L+ +I A EQ IPFVFAL RKALGR +NK VP
Sbjct: 684 MKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVP 743
Query: 744 VSVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAP---------- 793
VSVVGIF+Y GA+ F+K+VELT AR+AYK M+ ++QE E
Sbjct: 744 VSVVGIFNYFGAESLFNKLVELTEEARKAYKDMVAAMEQEQAEEALKNVKKVPHHMGHSR 803
Query: 794 -PSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTL---ELEESLEASTSQ 848
PS + C P + E E Y W+ +E G E E S + STS+
Sbjct: 804 NPSAASAISFCSVISEP--ISEVNEKEYETNWRNMVETSDGLEASENEKEVSCKHSTSE 860
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 48.1 bits (113), Expect = 3e-05
Identities = 88/494 (17%), Positives = 179/494 (36%), Gaps = 50/494 (10%)
Query: 142 LFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARGSHHLSIYAENSLKSDGYHKRTDRK 201
L+ KT+ +K Y + K E+ + + K GS+ + ++ ++ + K
Sbjct: 103 LYTSKTHLKKAEYKKSK--DEKGGTPLKKDSKKKGGSYATNPESKQIVEEKTKRQNEADK 160
Query: 202 SRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQPKWGPVHSVSTDISLLREVVKP 261
+ + + + + + + ++ PE Q ++ ++ K +S T+ L P
Sbjct: 161 TPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNP 220
Query: 262 AAVLSKG--------EIVVKNNPNESVTANAATNSPSCTRELSW-------TPMGYVVRQ 306
L + EI +N+ N + +W Y ++
Sbjct: 221 KKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKY 280
Query: 307 TLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKA 366
T T+ K+ + A S D K+ S + + +K+K + T+ + A
Sbjct: 281 TKYTK-----KDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDA 335
Query: 367 SQGSDLEQNEASRKNKKK-----KEKSTSKYEVLTVQEPPRIEDA-EEFPNLAVASERRD 420
G ++ + ++K+KKK K+K T KY T E +DA + NL AS+ D
Sbjct: 336 ESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDD 395
Query: 421 RIETPK---FQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVV 477
+ + K F + + + K + K EKK + K V
Sbjct: 396 KKKDAKKITFSTDSESELESKESQKD----------------EKKDKKDSKTDNKKSVKN 439
Query: 478 SVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIIL 537
+ S+ ++G++ + + D KK + ++ K
Sbjct: 440 DEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHS 499
Query: 538 KERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPE-GMDELISTPSVEDK 596
KE++ K+ ++++A ++D D S F ++ G + +E + P + K
Sbjct: 500 KEKKGSKKDIKKDARKDTESTDAEFDESS--KTGFKTSTKIKGSDTESEESLYKPGAKKK 557
Query: 597 SEEPPGTELQRDTE 610
+E GT E
Sbjct: 558 IDESDGTSANSKME 571
Score = 33.1 bits (74), Expect = 1.1
Identities = 52/226 (23%), Positives = 81/226 (35%), Gaps = 12/226 (5%)
Query: 309 STELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHP--TQKSKA 366
S L A KN + K I S D ++ + S E+ + K+ + + +
Sbjct: 384 SRNLKKASKNDDKKKDAKKITFSTDSES-ELESKESQKDEKKDKKDSKTDNKKSVKNDEE 442
Query: 367 SQGSDLEQNEASRKNKK--KKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIET 424
S +D E S+K KK KK K SK + E E +L + +++ E
Sbjct: 443 STDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEK 502
Query: 425 PKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQS------SKPVVVS 478
K K +D K+ + G T+ + K +++S K + S
Sbjct: 503 -KGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKIDES 561
Query: 479 VGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIP 524
G E +RG RMS KT N A + RE P
Sbjct: 562 DGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVPPSREKP 607
>gi|193788653 hypothetical protein LOC100131897 [Homo sapiens]
Length = 535
Score = 44.7 bits (104), Expect = 4e-04
Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 331 SADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTS 390
S+ K +PSS S PS HP + S S+ QN S K KS
Sbjct: 294 SSQSKETCVPSSPRTHSSPSQGSHSQPAHPGRASDCPSSSNNHQNLVSLKT-NSASKSAP 352
Query: 391 KYEVLTVQEPPRIEDAEEFPNLAVAS---ERRDRIETPKFQSKQQPQDNFKNNVKKSQLP 447
+ T P D EFPN ++ R ET K QS ++ D + ++ + +L
Sbjct: 353 GCQEQTANNPTE-SDTLEFPNCPGSNHLPSSLSRSET-KLQSNREISDINQIHLARGEL- 409
Query: 448 VQLDLGGMLTALEKKQHSQHAK 469
DL G L ++E+ HS K
Sbjct: 410 --CDLQGRLQSVEESLHSNQEK 429
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 43.9 bits (102), Expect = 6e-04
Identities = 89/478 (18%), Positives = 178/478 (37%), Gaps = 59/478 (12%)
Query: 178 SHHLSIYAENSLKSDGYHKRTDRKSRIIAKNVS--------TSKPEFEFTTLDFPELQGA 229
S H+ + +E +K +++++++ I+ + T + E E + E +G
Sbjct: 433 STHIKVKSEEKIK---VVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGG 489
Query: 230 ENNMSEI-QKQPKWGPVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNS 288
E +E +++ K P + S +E P +K K+ E + A S
Sbjct: 490 EEEEAEGGEEETKSPPAEEAA---SPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 289 PSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSD 348
P E + +P + S + +P+ + K+ A P+ P+ E S
Sbjct: 547 P----EKAKSP---AKEEAKSPPEAKSPEKEEA----KSPAEVKSPEKAKSPAKEEAKSP 595
Query: 349 P---SYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIED 405
S K K + KS A S +++ S K EK+ S P E+
Sbjct: 596 AEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS----------PTKEE 645
Query: 406 AEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHS 465
A+ P A + E+ + K +S + + + +K++ PV+ + A +
Sbjct: 646 AKS-PEKAKSPEKEEAKSPEKAKSPVKAE---AKSPEKAKSPVKAEAKSPEKAKSPVKEE 701
Query: 466 QHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTP-----HNPLDSSAPLMKKGKQ 520
+ + +K V P +K E + + K+P +P + +P K
Sbjct: 702 AKSPEKAKSPVKEEAKSPEKAKSPVK-EEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLD 760
Query: 521 REIPKAKKPTS--LKKIILKERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAEL 578
+ P+AK P + K ++ K ++E SP ++ + + P++ E+
Sbjct: 761 VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEV 820
Query: 579 SGPEGMDELISTPSV--------EDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRR 628
P +E V E+K+ P TE ++D++ PK+ ++
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKK 878
Score = 43.5 bits (101), Expect = 8e-04
Identities = 82/444 (18%), Positives = 163/444 (36%), Gaps = 52/444 (11%)
Query: 197 RTDRKSRIIAKNVSTSKPEFEFTTLDFP----ELQGAENNMSEIQKQPKWGPVHSVSTDI 252
++ K++ AK + S PE + + E++ E S +++ K P + S +
Sbjct: 545 KSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK-SPAEAKSPE- 602
Query: 253 SLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSP----SCTRELSWTPMGYVVRQTL 308
+ P +K K+ E + A SP S T+E + +P ++
Sbjct: 603 ----KAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK---AKSP 655
Query: 309 STELSAAPKNVTSMINLKTIASSADPKNVSIP-SSEALSSDPSYNKEKHIIHPTQKSKAS 367
E + +P+ S + A + P+ P +EA S + + + K +K+K+
Sbjct: 656 EKEEAKSPEKAKSPVK----AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSP 711
Query: 368 QGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKF 427
+ + E ++ K++ K+ K + +E E A+ + +TP
Sbjct: 712 VKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAK 771
Query: 428 QSKQQPQDNFKNNVK-----------KSQLPVQLDLGGMLTALEKKQH-SQHAKQSSKPV 475
+ + P D F K K++ P++ D + KK+ K+ KP
Sbjct: 772 EEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQ 831
Query: 476 VVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKI 535
V V P ++E + + + + K ++++ P +KP K
Sbjct: 832 EVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVE 891
Query: 536 ILKERQERKQRL---QENAVSPAFTSDDTQ------------DGESGGDDQFPEQAELSG 580
KE E K+++ ++ A + +D + D + P + + +
Sbjct: 892 AKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAA 951
Query: 581 PEGMDELISTPSVEDKSEEPPGTE 604
PE D + K EE P TE
Sbjct: 952 PEKKD---TKEEKAKKPEEKPKTE 972
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 42.4 bits (98), Expect = 0.002
Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 38/269 (14%)
Query: 304 VRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQK 363
++Q L+T+ + T ++ + AD + P+++ L S S KE P +
Sbjct: 511 LKQPLATQKDLTGQVPTPVVKQTKLKQRADSRESLKPAAKPLPSK-SVRKESKEETP-EV 568
Query: 364 SKASQGSDLEQNEASRKNKKKKEK--------STSKYEVLTVQEPPRIEDAEEFPNLAVA 415
+K + + E+ K KK+K S ++ EV + +EP ++
Sbjct: 569 TKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDV 628
Query: 416 SERRDRIETPKFQSKQQPQDNF---------------KNNVKKSQLP----VQLDLGGML 456
+ + +T K ++K +P+D K +KK + P V+ ++ +
Sbjct: 629 KPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEI 688
Query: 457 TALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMK 516
EKK+ + K+ + P V KE E+ + K P + SS PL
Sbjct: 689 KKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPL-- 746
Query: 517 KGKQREIPKAKKPTSLKKIILKERQERKQ 545
+AKKP +LK + K+ + K+
Sbjct: 747 -------SEAKKPAALKPKVPKKEESVKK 768
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 42.0 bits (97), Expect = 0.002
Identities = 111/565 (19%), Positives = 197/565 (34%), Gaps = 104/565 (18%)
Query: 178 SHHLSIYAENSLKSDGYHKRTDRKSR-------IIAKNVSTSKPEF--EFTTLDFPELQG 228
S LS ++S S + K R+++ + K + + E E T +
Sbjct: 449 SQELSESLKDSATSKTFEKNVVRQNKESILEKFSVRKEIINLEKEMFNEGTCIQQDSFSS 508
Query: 229 AENNMSEIQKQPKWGPVHSVSTDISL-----LREVVKPAAVLSKGEIVVKNNPNESVTAN 283
+E E K K PV+ S D + + P + + + + +P+ +V+ N
Sbjct: 509 SEKGSYETSKHEKQPPVYCTSPDFKMGGASDVSTAKSPFSAVGESNLP---SPSPTVSVN 565
Query: 284 AATNSPSCTR-ELSWTPM----------------GYVVRQTLSTELSAAPKNVTSMINLK 326
T SP T +L+ P+ G + ST L+ ++V I+++
Sbjct: 566 PLTRSPPETSSQLAPNPLLLSSTTELIEEISESVGKNQFTSESTHLNVGHRSVGHSISIE 625
Query: 327 TIA-----SSADPKNVSIPS-SEALSSDPSYNKEK--HIIHPTQ-------------KSK 365
+ + ++ IP S +L PS E H I P+ K
Sbjct: 626 CKGIDKEVNDSKTTHIDIPRISSSLGKKPSLTSESSIHTITPSVVNFTSLFSNKPFLKLG 685
Query: 366 ASQGSDLE-----------QNEASRKNKKKKEKSTSKYEVLTVQEPP--RIEDAEEFPNL 412
A SD Q++ +K K +K + T T + P +E +E F N+
Sbjct: 686 AVSASDKHCQVAESLSTSLQSKPLKKRKGRKPRWTKVVARSTCRSPKGLELERSELFKNV 745
Query: 413 AVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLG-----GMLTALEKKQHSQH 467
+ +S E KF P ++ K +LP +L +L EK H
Sbjct: 746 SCSSLSNSNSEPAKFMKNIGPPSFVDHDFLKRRLP-KLSKSTAPSLALLADSEKPSHKSF 804
Query: 468 AKQS-SKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHN-----PLDSSAPLMKKGKQR 521
A S + VS + + K + + M Q++ P P L K +Q
Sbjct: 805 ATHKLSSSMCVSSDLLSDIYKPKRGRPKSKEMPQLEGPPKRTLKIPASKVFSLQSKEEQE 864
Query: 522 --------EIPKAKKPTSLKKIILKERQERKQRLQENAVSPAFTS-------------DD 560
EIP K+ S+ K + ++Q + P S +
Sbjct: 865 PPILQPEIEIPSFKQGLSVSPFPKKRGRPKRQMRSPVKMKPPVLSVAPFVATESPSKLES 924
Query: 561 TQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKS--EEPPGTELQRDTEASHLAPNH 618
D D F + +L P+ +D+ PSV S E P ++ + +
Sbjct: 925 ESDNHRSSSDFFESEDQLQDPDDLDD-SHRPSVCSMSDLEMEPDKKITKRNNGQLMKTII 983
Query: 619 TTFPKIHSRRFRDYCSQMLSKEVDA 643
K+ + + + +Q+LS V++
Sbjct: 984 RKINKMKTLKRKKLLNQILSSSVES 1008
Score = 30.4 bits (67), Expect = 7.3
Identities = 62/275 (22%), Positives = 106/275 (38%), Gaps = 48/275 (17%)
Query: 303 VVRQTLSTELSAAPKNVTSMINLKTIASSA--------DPKNVSIPSSEALSSDPSYNKE 354
+V + L +L + V K +ASSA K +S P + +S D + N +
Sbjct: 367 LVNKDLGKKLGSTVGLVAKDCAKKIVASSAMGLVNKDIGKKLMSCPLAGLISKD-AINLK 425
Query: 355 KHIIHPTQKS-KASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLA 413
+ PTQ+ KAS +++ E+ ++ K+ +TSK V + E+F
Sbjct: 426 AEALLPTQEPLKASCSTNINNQESQELSESLKDSATSKTFEKNVVRQNKESILEKF---- 481
Query: 414 VASERRDRIETPKFQSKQQ---PQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQ 470
S R++ I K + QD+F ++ K S + S+H KQ
Sbjct: 482 --SVRKEIINLEKEMFNEGTCIQQDSFSSSEKGSY-----------------ETSKHEKQ 522
Query: 471 ----SSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKA 526
+ P GA V + + G S + +P +P S PL R P+
Sbjct: 523 PPVYCTSPDFKMGGASDVSTAKSPFSAVGE--SNLPSP-SPTVSVNPL-----TRSPPET 574
Query: 527 KKPTSLKKIILKERQERKQRLQENAVSPAFTSDDT 561
+ ++L E + + E+ FTS+ T
Sbjct: 575 SSQLAPNPLLLSSTTELIEEISESVGKNQFTSEST 609
>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
Length = 341
Score = 41.6 bits (96), Expect = 0.003
Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 47/268 (17%)
Query: 343 EALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNK---------------KKKEK 387
E + P+ KE + P ++S+ + D E+ E K K KKK
Sbjct: 11 EGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKGKGQKLCEIERIHFFLSKKKTD 70
Query: 388 STSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLP 447
L P + ++ N+ S + +++ K++ F+N + KS
Sbjct: 71 ELRNLHKLLYNRPGTVSSLKK--NVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSICE 128
Query: 448 V-QLDLGGMLTALEKK--QHSQHAKQSSKPVVVS-----------------------VGA 481
V L+ G+ + L K+ H K S KP+ S
Sbjct: 129 VLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKC 188
Query: 482 VPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKII----L 537
+LS E +S E ++ + + +S KK +RE PK K + KK + +
Sbjct: 189 PEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANV 248
Query: 538 KERQERKQRLQENAVSPAFTSDDTQDGE 565
K+ + +N+ S+D+ D E
Sbjct: 249 KKADSSTTKKNQNSSKKESESEDSSDDE 276
Score = 39.3 bits (90), Expect = 0.016
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 334 PKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEAS--RKNKKKKEKSTSK 391
P +P S+ S S KE++ +K+K ++ ++ +E+S KK KE+S+
Sbjct: 154 PSGKPLPKSKKTCSKGS-KKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNKEESSDD 212
Query: 392 YEVLTVQEPPRIEDAEEFPNLAVASERRDRIETP--KFQSKQQPQDNFKNNVKKSQLPVQ 449
+ + +EPP+ E P S+ + +++ K + N ++ K+S+
Sbjct: 213 EDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDS 272
Query: 450 LDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKE 488
D ++ L+K + K++ K ++ S V K+
Sbjct: 273 SDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQ 311
>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
Length = 2472
Score = 41.6 bits (96), Expect = 0.003
Identities = 61/300 (20%), Positives = 120/300 (40%), Gaps = 32/300 (10%)
Query: 318 NVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKS-----KASQGSDL 372
N++S + +K + K +P ++ S + + I++ T++S KA Q +
Sbjct: 1242 NISSTVTVKNNQETMI-KTDFLPKAKQREGTFSKSDSEKIVNGTKRSSRRAGKAEQTGNK 1300
Query: 373 EQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQ 432
R +K + + + V+ PP + + E S+ + + +
Sbjct: 1301 RSKPLMRSEPEKNTEESVEGIVVLENNPPGLLNQTE-----CVSDNQVHLSESTME---- 1351
Query: 433 PQDNFKNNVKKSQLPVQLDLGGMLTALEKK-QHSQHAKQSSKPVVVSV-------GAVPV 484
DN K + V L+ T EK + + +K+++ PVV+S V +
Sbjct: 1352 -HDNTKLKAATVENAVLLETN---TVEEKNVEINLESKENTPPVVISADQMVNEDSQVQI 1407
Query: 485 LSKECASGERGRRMSQM---KTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIIL-KER 540
+ RR S++ T ++S ++ K+ E P K P +K +L K++
Sbjct: 1408 TPNQKTLRRSSRRRSEVVESTTESQDKENSHQKKERRKEEEKPLQKSPLHIKDDVLPKQK 1467
Query: 541 QERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGM-DELISTPSVEDKSEE 599
+Q LQEN + + GE+ + + + + + PE + E T + DKS E
Sbjct: 1468 LIAEQTLQENLIEKGSNLHEKTLGETSANAETEQNKKKADPENIKSEGDGTQDIVDKSSE 1527
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 41.2 bits (95), Expect = 0.004
Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 35/232 (15%)
Query: 343 EALSSDPSYNKEKHIIHPTQKSKASQGS-----DLEQNEASRKNKKKKEKSTSKYEVLTV 397
E ++ P+ N E+ +K K +G D + E K+ K K+ + K E+ +
Sbjct: 77 ETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKSKKTAKPKVEMYSG 136
Query: 398 QEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLT 457
+ D ++F L ++ + + K+ ++ +DN K ++S++ + G
Sbjct: 137 SD-----DDDDFNKLPKKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESD 191
Query: 458 ALEKKQHSQHAKQSSKPVV----------VSVGAVPVLSKECASGERGRRMSQMKTPHNP 507
+ + Q Q +KP S V K+ ER R+
Sbjct: 192 EFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRD------- 244
Query: 508 LDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENAVSPAFTSD 559
+ A L K ++ E+ KK S +K E +++ +E V T D
Sbjct: 245 -EEKAKLRKLKEKEELETGKKDQSKQK-------ESQRKFEEETVKSKVTVD 288
Score = 41.2 bits (95), Expect = 0.004
Identities = 59/307 (19%), Positives = 118/307 (38%), Gaps = 57/307 (18%)
Query: 326 KTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKK 385
+T+ S IP+SE + P+ ++ + +K K + + E+ E K+K
Sbjct: 279 ETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKE------KEK 332
Query: 386 EKSTSKYEVLTVQEP-PRIEDAEE------------FPNLAVASERRDRIETPKFQSKQQ 432
+K SK V +QE ++++ EE L + +R+E K + K+Q
Sbjct: 333 KKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRERKKQ 392
Query: 433 PQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASG 492
+ K +KK G +LT K Q A+ + ++ V V SK+
Sbjct: 393 KEKERKERLKKE--------GKLLT---KSQREARARAEATLKLLQAQGVEVPSKD---- 437
Query: 493 ERGRRMSQMKTPHNPLDSSAPLMKKGKQREIP---KAKKPTSLKKIILKERQERKQRLQE 549
L P+ + K+++IP ++K+ + ++ + ++
Sbjct: 438 --------------SLPKKRPIYEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEK 483
Query: 550 NAVSPAFTSDDTQDGESGGDDQF------PEQAELSGPEGMDELISTPSVEDKSEEPPGT 603
P ++ +D E G D + E ++ G + E+ P E++ EE
Sbjct: 484 EETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEE 543
Query: 604 ELQRDTE 610
+ + + E
Sbjct: 544 DEESEEE 550
Score = 40.4 bits (93), Expect = 0.007
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 24/235 (10%)
Query: 326 KTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKK 385
K A N SE + KE+ I+ + +S L+ + +KN+K K
Sbjct: 148 KKAKGKAQKSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNK 207
Query: 386 EKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQ 445
P IE E + + + + + K + +++ +D K ++K +
Sbjct: 208 -------------PGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLK 254
Query: 446 LPVQLDLGGMLTALEKKQHSQHAKQSSK-PVVVSVGAVPVLSKECAS-------GERGRR 497
+L+ G + +K+ + +++ K V V G +P ++ + E ++
Sbjct: 255 EKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKK 314
Query: 498 MSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENAV 552
K + KKG + KA + K LKE +ER++R +E +
Sbjct: 315 KKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAK---LKEEEERQKREEEERI 366
>gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens]
Length = 710
Score = 40.8 bits (94), Expect = 0.005
Identities = 90/482 (18%), Positives = 179/482 (37%), Gaps = 57/482 (11%)
Query: 160 DSERADGTISSEIKSARGSHHLSIYAENSLKSDGYHKRT------DRKSRIIAKNVSTSK 213
D E + I++EIK S +S + +LK+ K + ++K I++ VS+ K
Sbjct: 207 DEEGSVSNIATEIKDGEKSGTVSSQKKPALKATSDEKDSFSNITREKKDGEISRTVSSQK 266
Query: 214 PEFEFTTLDFPELQGA---ENNMSEIQKQPKWGPV-HSVSTD----ISLLREVVKPAAVL 265
P P L+ E+++ I ++ K G +VS D + R+ +
Sbjct: 267 P---------PALKATSVKEDSVLNIAREKKDGEKSRTVSFDQPPGLKATRDEKDSLLNI 317
Query: 266 SKGE--------IVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPK 317
++G+ + + P T++ + + TR + V L
Sbjct: 318 ARGKKNGEKTRRVSSRKKPALKATSDEKDSFSNITRGKKDGEISRKVSSQKPPTLKGTSD 377
Query: 318 NVTSMINL---------KTIASSADPKNVSIPSSEA-----LSSDPSYNKEKHIIHPTQK 363
S++ + SS P + S E ++ Y ++ + +K
Sbjct: 378 EEDSVLGIARENKDGEKSRTVSSEKPPGLKASSDEKDSVLNIARGKKYGEKTKRVSSRKK 437
Query: 364 SKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDA--EEFPNLAVASERRDR 421
SD E++ S ++KK+ S+ ++ Q+PP ++ EE L +A E +D
Sbjct: 438 PSLEATSD-EKDSFSNITREKKDGEISRK--VSSQKPPALKGTSDEEDSVLGIARENKDG 494
Query: 422 IETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGA 481
++ S++ P ++ K S L + G + + S K + K +
Sbjct: 495 EKSRTVSSEKPPGLKATSDEKDSVLNIAR---GKKDGEKTRTVSSRKKPALKATSDEKDS 551
Query: 482 VPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQ 541
V +++E GE+ R +S K P A K+ + KK + + ++Q
Sbjct: 552 VLYIAREKKDGEKSRTVSSQKQP----ALKAICDKEDSVPNMATEKKDEQISGTVSSQKQ 607
Query: 542 ERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPP 601
+ + S + + +DG+ G +Q + +S + E K +
Sbjct: 608 PALKATSDKKDSVSNIPTEIKDGQQSGTVSSQKQPAWKATSVKKDSVSNIATEIKDGQIR 667
Query: 602 GT 603
GT
Sbjct: 668 GT 669
Score = 31.2 bits (69), Expect = 4.3
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 362 QKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDR 421
QK A + + E++ S + KE S Q ++ ++ L +A+
Sbjct: 95 QKQPAEKATSDEKDSVSNIATEIKEGQQSGTVSPQKQSAQKVIFKKKVSLLNIATRIMGG 154
Query: 422 IETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGA 481
++ S++QP ++ S L ++ L+ S +Q+ K G+
Sbjct: 155 GKSGTVSSQKQPASKTASDKTDSALNTATEIKD---GLQCGTVSSQKQQALKATTDEEGS 211
Query: 482 VPVLSKECASGERGRRMSQMKTP-----HNPLDSSAPLMKKGKQREIPK---AKKPTSLK 533
V ++ E GE+ +S K P + DS + + ++ K EI + ++KP +LK
Sbjct: 212 VSNIATEIKDGEKSGTVSSQKKPALKATSDEKDSFSNITREKKDGEISRTVSSQKPPALK 271
Query: 534 KIILKE 539
+KE
Sbjct: 272 ATSVKE 277
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/242 (21%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 372 LEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQ 431
LE+++ +K K+K++K ++ L + I A++ + + +E P + +
Sbjct: 737 LEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQ---VDIVTEEMPENALPSDEDDK 793
Query: 432 QPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAK-QSSKPVVVSVGAVPVLSKECA 490
P D ++ + +DL L EK +H ++SK V V SK+
Sbjct: 794 DPNDPYR--------ALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPK 845
Query: 491 SGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQEN 550
E+ + + K K++E K K P KK KE++ER + +++
Sbjct: 846 KKEKKHKEKERD--------------KEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKS 891
Query: 551 AVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGTELQRDTE 610
P + + + G PE+ +L PE L++ S + + G+ LQ D++
Sbjct: 892 KKQPPGSEEAAGEPVQNG---APEEEQLP-PESSYSLLAENSYVKMTCDIRGS-LQEDSQ 946
Query: 611 AS 612
+
Sbjct: 947 VT 948
Score = 31.2 bits (69), Expect = 4.3
Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Query: 339 IPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQ 398
+P E S P ++KH K K + + + +K +K+++ +K + + +
Sbjct: 834 VPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKK 893
Query: 399 EPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGML 456
+PP E+A P A E + + P+ ++ + S + + D+ G L
Sbjct: 894 QPPGSEEAAGEPVQNGAPE----------EEQLPPESSYSLLAENSYVKMTCDIRGSL 941
Score = 30.0 bits (66), Expect = 9.5
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 319 VTSMINLKTIASSADPKNVSIPSSEALSSD---PSYNKEKHIIHPTQKSKASQGSDLEQN 375
VT + + S D K+ + P AL D P + EK I + ++ S+ + +
Sbjct: 777 VTEEMPENALPSDEDDKDPNDPY-RALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVP 835
Query: 376 EASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQ 434
+K+KK K+K E +E + ++ ++ P R+++ E K + K + Q
Sbjct: 836 MVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQ 894
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 40.4 bits (93), Expect = 0.007
Identities = 80/365 (21%), Positives = 130/365 (35%), Gaps = 42/365 (11%)
Query: 270 IVVKNNPNES--VTANAATNSPS-CTRELSWTPMGYVVRQ-TLSTELSAAPKNVTSMINL 325
I VK ES +T +A++SPS L+ P + + Q TL+ E S P T +L
Sbjct: 2848 IPVKPTSAESGLLTPVSASSSPSKAFASLTTAPPTWGIPQSTLTFEFSEVPSLDTKSASL 2907
Query: 326 KTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKK 385
T S + +IP S+A ++ S +K E+N +R K
Sbjct: 2908 PTPGQSLN----TIPDSDASTASSSLSKSP-----------------EKNPRARMMTSTK 2946
Query: 386 EKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIET--PKFQSKQQPQDNFKNNVKK 443
S S ++ E P + P++A R T P++ S+ ++ + K
Sbjct: 2947 AISASSFQSTGFTETP---EGSASPSMAGHEPRVPTSGTGDPRYASESM---SYPDPSKA 3000
Query: 444 SQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGER------GRR 497
S L LT L + + SS P+ +S AS R G
Sbjct: 3001 SSAMTSTSLASKLTTLFSTGQAARSGSSSSPISLSTEKETSFLSPTASTSRKTSLFLGPS 3060
Query: 498 MSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENAVSPAFT 557
M++ L +SA + + + + P + E + Q +P+ T
Sbjct: 3061 MARQPNILVHLQTSALTLSPTSTLNMSQEEPPELTSSQTIAEEEGTTAETQTLTFTPSET 3120
Query: 558 SDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEASHLAPN 617
S + P S PE IS P+ E GT + +S A
Sbjct: 3121 PTSLLPVSSPTE---PTARRKSSPETWASSISVPAKTSLVETTDGTLVTTIKMSSQAAQG 3177
Query: 618 HTTFP 622
++T+P
Sbjct: 3178 NSTWP 3182
Score = 33.1 bits (74), Expect = 1.1
Identities = 76/358 (21%), Positives = 122/358 (34%), Gaps = 47/358 (13%)
Query: 279 SVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVS 338
+V+ AA +SP + S+T + V+ +T S + S+A + TS+ P N
Sbjct: 654 AVSKTAAGSSPPGGTKPSYTMVSSVIPETSSLQ-SSAFREGTSL--------GLTPLNTR 704
Query: 339 IPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQ 398
P S + K I P S + + +K +T E+ T
Sbjct: 705 HPFSSPEPDSAGHTKISTSI-PLLSSASVLEDKVSATSTFSHHKATSSITTGTPEISTKT 763
Query: 399 EPPR-IEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLT 457
+P + + N A + ER +P ++ G +LT
Sbjct: 764 KPSSAVLSSMTLSNAATSPERVRNATSPLTHPSPSGEET---------------AGSVLT 808
Query: 458 ALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKK 517
S A+ + P + G + S E S +S +KT + S L
Sbjct: 809 L------STSAETTDSPNIHPTGTLTSESSESPSTLSLPSVSGVKTTFSSSTPSTHLFTS 862
Query: 518 GKQREI---PKAKKP-TSLKKIILKERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFP 573
G++ E P +P TS+ ++ R + +P F + DT S
Sbjct: 863 GEETEETSNPSVSQPETSVSRV-------RTTLASTSVPTPVFPTMDTWPTRSAQFSSSH 915
Query: 574 EQAELSGPEGMDELISTPSVEDKSEEPPGT----ELQRDTEASHLAPNHTTFPKIHSR 627
+EL ST S K GT + RDT AP TT+P+ R
Sbjct: 916 LVSELRATSSTSVTNSTGSALPKISHLTGTATMSQTNRDTFNDSAAPQSTTWPETSPR 973
Score = 31.2 bits (69), Expect = 4.3
Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 31/246 (12%)
Query: 274 NNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSAD 333
+ P T++ + +SP T ++ +P L+T AP+ VTS I A+S
Sbjct: 11698 STPVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTT 11757
Query: 334 PKNVS----IPSSEALSSDPSYNKEKHIIHP-TQKSKASQGS----DLEQNEASRKNKKK 384
++ +P + AL S HP T+ SK S + + AS +
Sbjct: 11758 VPTLTHSPGMPETTALLS----------THPRTETSKTFPASTVFPQVSETTASLTIRPG 11807
Query: 385 KEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIET--PKFQSKQQPQDNFKNNVK 442
E ST+ P + F L + R D T P +K P
Sbjct: 11808 AETSTAL---------PTQTTSSLFTLLVTGTSRVDLSPTASPGVSAKTAPLSTHPGTET 11858
Query: 443 KSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVG-AVPVLSKECASGERGRRMSQM 501
+ +P G+L S A+ S+ + ++V AV LS + ++ + ++
Sbjct: 11859 STMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSGLSSASITTDKPQTVTSW 11918
Query: 502 KTPHNP 507
T +P
Sbjct: 11919 NTETSP 11924
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 40.0 bits (92), Expect = 0.009
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 5/166 (3%)
Query: 484 VLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQER 543
++SK SG GRR+S P +P+ +++ + G E KK TS +E
Sbjct: 405 LMSKPVLSGGTGRRISLSDMPRSPMSTNSS-VHTGSDVEQDAEKKATSSH---FSASEES 460
Query: 544 KQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGT 603
L ++ SPA T SG F Q D+ +T S+ + + +
Sbjct: 461 MDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKA 520
Query: 604 ELQRDTEASHLAPNHTTFPKIH-SRRFRDYCSQMLSKEVDACVTDL 648
E+ + + T P I R+ R L K +++C L
Sbjct: 521 EMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQL 566
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 40.0 bits (92), Expect = 0.009
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 5/166 (3%)
Query: 484 VLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQER 543
++SK SG GRR+S P +P+ +++ + G E KK TS +E
Sbjct: 430 LMSKPVLSGGTGRRISLSDMPRSPMSTNSS-VHTGSDVEQDAEKKATSSH---FSASEES 485
Query: 544 KQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGT 603
L ++ SPA T SG F Q D+ +T S+ + + +
Sbjct: 486 MDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKA 545
Query: 604 ELQRDTEASHLAPNHTTFPKIH-SRRFRDYCSQMLSKEVDACVTDL 648
E+ + + T P I R+ R L K +++C L
Sbjct: 546 EMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQL 591
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 40.0 bits (92), Expect = 0.009
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 5/166 (3%)
Query: 484 VLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQER 543
++SK SG GRR+S P +P+ +++ + G E KK TS +E
Sbjct: 430 LMSKPVLSGGTGRRISLSDMPRSPMSTNSS-VHTGSDVEQDAEKKATSSH---FSASEES 485
Query: 544 KQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGT 603
L ++ SPA T SG F Q D+ +T S+ + + +
Sbjct: 486 MDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKA 545
Query: 604 ELQRDTEASHLAPNHTTFPKIH-SRRFRDYCSQMLSKEVDACVTDL 648
E+ + + T P I R+ R L K +++C L
Sbjct: 546 EMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQL 591
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 39.7 bits (91), Expect = 0.012
Identities = 68/310 (21%), Positives = 113/310 (36%), Gaps = 60/310 (19%)
Query: 320 TSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASR 379
T +++ + P S+P S S +YN K PT + + QN A+
Sbjct: 875 TRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPKS---PTPRVYGTIKPAFNQNSAA- 930
Query: 380 KNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKN 439
K +T V T+ + E ++ SE + PQ NF+N
Sbjct: 931 ----KVSPATRSDTVATMMREKGMYFRRELDRYSLDSE-------DLYSRNAGPQANFRN 979
Query: 440 NVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVP---VLSKECASGERGR 496
K+ Q+P + +S+ K +SK V V +L K+ +
Sbjct: 980 --KRGQMP-------------ENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPE 1024
Query: 497 RMSQMKTP----HNPLDSSAPLMKKGKQREI-PKAKKPTSLKK-------------IILK 538
+ + P P SS+ +G EI P+A +P S + I
Sbjct: 1025 KTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQAPEPPSQLRPDESLTVSSPFAAAIAG 1084
Query: 539 ERQERKQRLQENAVSPAFTSDDTQDGESG--------GDDQFPEQAELSGPEGMDELIST 590
++R++RL+ SPAF S D D + G FPE+ + + + ++L S+
Sbjct: 1085 AVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRTRPSMFPEEGDFADEDSAEQL-SS 1143
Query: 591 PSVEDKSEEP 600
P EP
Sbjct: 1144 PMPSATPREP 1153
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 39.3 bits (90), Expect = 0.016
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 334 PKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEAS--RKNKKKKEKSTSK 391
P +P S+ S S KE++ +K+K ++ ++ +E+S KK KE+S+
Sbjct: 188 PSGKPLPKSKKTCSKGS-KKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNKEESSDD 246
Query: 392 YEVLTVQEPPRIEDAEEFPNLAVASERRDRIETP--KFQSKQQPQDNFKNNVKKSQLPVQ 449
+ + +EPP+ E P S+ + +++ K + N ++ K+S+
Sbjct: 247 EDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDS 306
Query: 450 LDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKE 488
D ++ L+K + K++ K ++ S V K+
Sbjct: 307 SDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQ 345
Score = 34.7 bits (78), Expect = 0.39
Identities = 61/302 (20%), Positives = 108/302 (35%), Gaps = 81/302 (26%)
Query: 343 EALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKK-----KKEKSTSKYEVLTV 397
E + P+ KE + P ++S+ + D E+ E K K K+EK K E LT+
Sbjct: 11 EGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREKK--KVERLTM 68
Query: 398 Q------EPPRIEDAE-------EFPNLAVASERRDRIE--------------------- 423
Q EP I + E + ++ ++ D +
Sbjct: 69 QVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTVSSLKKNVG 128
Query: 424 ----------TPKFQSKQQPQDNFKNNVKKSQLPV-QLDLGGMLTALEKK--QHSQHAKQ 470
+ +++ K++ F+N + KS V L+ G+ + L K+ H K
Sbjct: 129 QFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKP 188
Query: 471 SSKPVVVS-----------------------VGAVPVLSKECASGERGRRMSQMKTPHNP 507
S KP+ S +LS E +S E ++ + +
Sbjct: 189 SGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNKEESSDDED 248
Query: 508 LDSSAPLMKKGKQREIPKAKKPTSLKKII----LKERQERKQRLQENAVSPAFTSDDTQD 563
+S KK +RE PK K + KK + +K+ + +N+ S+D+ D
Sbjct: 249 KESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSD 308
Query: 564 GE 565
E
Sbjct: 309 DE 310
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 39.3 bits (90), Expect = 0.016
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 17/147 (11%)
Query: 329 ASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKS 388
+SS+D + S S + K+K ++ S+ E E+ +K KK K+++
Sbjct: 108 SSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDET 167
Query: 389 TSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQ--QPQDNFKNNVKKSQL 446
+ +V ++ + + ++ P + +S D E + + K+ + ++ K VKK
Sbjct: 168 EKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEEREQAKEKVKKK-- 225
Query: 447 PVQLDLGGMLTALEKKQHSQHAKQSSK 473
+KKQH +H+K+ K
Sbjct: 226 -------------KKKQHKKHSKKKKK 239
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.9 bits (89), Expect = 0.020
Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 16/301 (5%)
Query: 372 LEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQ 431
L++ E R+ + K+E+ + L +E R+E E E+R + E P+ + +Q
Sbjct: 579 LKREEERRQQRLKREQEERLEQRLKREEVERLEQEER-------REQRLKREEPEEERRQ 631
Query: 432 QPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECAS 491
Q + + ++ Q + L++++ + +Q K L++E
Sbjct: 632 QLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQE 691
Query: 492 GERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQENA 551
R R S++ L+S A ++ K P+ ++ ++ ++R+ R+ LQ
Sbjct: 692 QARERIKSRIPKWQWQLESEAD-ARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQE 750
Query: 552 VSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVEDKSEEPPGTELQRDTEA 611
A Q+ E D + QAE G L + P + ++ E E ++ E
Sbjct: 751 EERAHRQQ--QEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQ 808
Query: 612 SHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKR 671
L + RR R+ Q L +E + L+ R Q ++D ++ +R
Sbjct: 809 RFLPEEEEKEQRRRQRREREKELQFLEEE------EQLQRRERAQQLQEEEDGLQEDQER 862
Query: 672 R 672
R
Sbjct: 863 R 863
Score = 32.3 bits (72), Expect = 1.9
Identities = 38/204 (18%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 351 YNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAE--- 407
Y +E+ + ++ + + E R+ ++++E + ++L ++ R ++ E
Sbjct: 1140 YREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQY 1199
Query: 408 --EFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHS 465
E ++R R E + K Q + +N V+ +++ + LE Q
Sbjct: 1200 REEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVRDNKVYCKGRENEQFRQLEDSQLR 1259
Query: 466 QHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPK 525
+QS + + +G ++ E+ RR Q + H P + +++ +Q+E +
Sbjct: 1260 D--RQSQQDLQHLLG-----EQQERDREQERRRWQQRDRHFPEEEQ---LEREEQKEAKR 1309
Query: 526 AKKPTSLKKIILKERQERKQRLQE 549
+ + +K +L+E +E K+R QE
Sbjct: 1310 RDRKSQEEKQLLREEREEKRRRQE 1333
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.9 bits (89), Expect = 0.020
Identities = 38/202 (18%), Positives = 83/202 (41%), Gaps = 19/202 (9%)
Query: 353 KEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNL 412
+ + ++ PT ++ S +++N R + K+KE+ ++ R E+AE+
Sbjct: 501 RNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKEKERQR-------LENLRRKEEAEQLRRQ 553
Query: 413 AVASERRDRIETPKFQSKQQPQDNFK--------NNVKKSQLPVQLDLGGMLTALEKKQH 464
V ++R R+E K + +++ + + KK Q+ + T K++
Sbjct: 554 KVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEER 613
Query: 465 SQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIP 524
K K + V K+ R R + Q + + L++K K+ E
Sbjct: 614 LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQE----LLQKKKEEEQE 669
Query: 525 KAKKPTSLKKIILKERQERKQR 546
+ +K K++ + QER+++
Sbjct: 670 RLRKAAEAKRLAEQREQERREQ 691
>gi|154090979 hypothetical protein LOC57481 [Homo sapiens]
Length = 1709
Score = 38.5 bits (88), Expect = 0.027
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 252 ISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTE 311
+S++ V++P EI+ KN V + SP ++ + Q+ S E
Sbjct: 313 LSIIPPVIQP-------EIISKN----LVEISLDDESPKNPQKKALPHKSLTATQSFS-E 360
Query: 312 LSAAPKNVTSMINLKTIASSAD---PKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQ 368
LS+ P S+ T+AS++ P S P++ D S + K ++P ++ K Q
Sbjct: 361 LSSGPDCSQSLTAFATLASTSSTQLPIGFSTPATTQGCLDSSAARHKMTLNPRKQKKNLQ 420
Query: 369 ----GSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIET 424
G + + + + T E + EP +E EE PNL + SE I
Sbjct: 421 VIIRGLPVWFSHFQGILEGSLQCVTQTLETPNLDEPLPVEPKEEEPNLPLVSEEEKSITK 480
Query: 425 PK 426
PK
Sbjct: 481 PK 482
Score = 31.6 bits (70), Expect = 3.3
Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 27/214 (12%)
Query: 330 SSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQN--------EASRKN 381
SS P NV + S PS + + +H + + A++ S E N + +
Sbjct: 1347 SSKGPVNVPVKQSSGEKHLPSSSPFQQQVHSSSVNAAARRSVFESNSDNWFLGRDEAFAI 1406
Query: 382 KKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNV 441
K KK SK + ++ P A + +A R+ + K+ + NN
Sbjct: 1407 KTKKFSQGSKNPIKSIPAP-----ATKPGKFTIAPVRQTSTSGGIYSKKEDLESGDGNNN 1461
Query: 442 KKSQLPVQLDL----GGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRR 497
+ + L Q D+ G L Q + KQ + + SV + P+ S GR
Sbjct: 1462 QHANLSNQDDVEKLFGVRLKRAPPSQKYKSEKQDNFTQLASVPSGPI------SSSVGRG 1515
Query: 498 MSQMKTPHNPLDSSAPLMK----KGKQREIPKAK 527
T LD++ L K KQ+ PK++
Sbjct: 1516 HKIRSTSQGLLDAAGNLTKISYVADKQQSRPKSE 1549
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 38.1 bits (87), Expect = 0.035
Identities = 62/317 (19%), Positives = 128/317 (40%), Gaps = 34/317 (10%)
Query: 361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEV--LTVQEPPRIEDAEEFPNLAVASER 418
T KS Q ++ + E S+ N+K ++ + + Y+V ++ IE + L E
Sbjct: 1088 TLKSLLEQETENLRTEISKLNQKIQDNNEN-YQVGLAELRTLMTIEKDQCISELISRHEE 1146
Query: 419 RDRI---ETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPV 475
I E K S + N+K+ + +Q L L+ALE+++ + +Q K
Sbjct: 1147 ESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQQEEKYE 1206
Query: 476 VVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKI 535
+ K +S E+ R K + K I A K L++
Sbjct: 1207 AIIQNLEKDRQKLVSSQEQDREQLIQK------------LNCEKDEAIQTALKEFKLERE 1254
Query: 536 ILKERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVED 595
++++ K + EN ++ + D T+ S + E+ + + +++L
Sbjct: 1255 VVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQL-------- 1306
Query: 596 KSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRF 655
+ +E E ++ S +A T F + +R +M + + ++D LK ++
Sbjct: 1307 EEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTR------EKMRKENIINDLSDKLKSTMQQ 1360
Query: 656 QDRMYQKDPVKAKTKRR 672
Q+R KD +++ ++ R
Sbjct: 1361 QER--DKDLIESLSEDR 1375
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 38.1 bits (87), Expect = 0.035
Identities = 62/317 (19%), Positives = 128/317 (40%), Gaps = 34/317 (10%)
Query: 361 TQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEV--LTVQEPPRIEDAEEFPNLAVASER 418
T KS Q ++ + E S+ N+K ++ + + Y+V ++ IE + L E
Sbjct: 1088 TLKSLLEQETENLRTEISKLNQKIQDNNEN-YQVGLAELRTLMTIEKDQCISELISRHEE 1146
Query: 419 RDRI---ETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPV 475
I E K S + N+K+ + +Q L L+ALE+++ + +Q K
Sbjct: 1147 ESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQQEEKYE 1206
Query: 476 VVSVGAVPVLSKECASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKKI 535
+ K +S E+ R K + K I A K L++
Sbjct: 1207 AIIQNLEKDRQKLVSSQEQDREQLIQK------------LNCEKDEAIQTALKEFKLERE 1254
Query: 536 ILKERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAELSGPEGMDELISTPSVED 595
++++ K + EN ++ + D T+ S + E+ + + +++L
Sbjct: 1255 VVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQL-------- 1306
Query: 596 KSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLLKELVRF 655
+ +E E ++ S +A T F + +R +M + + ++D LK ++
Sbjct: 1307 EEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTR------EKMRKENIINDLSDKLKSTMQQ 1360
Query: 656 QDRMYQKDPVKAKTKRR 672
Q+R KD +++ ++ R
Sbjct: 1361 QER--DKDLIESLSEDR 1375
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 37.7 bits (86), Expect = 0.046
Identities = 85/462 (18%), Positives = 182/462 (39%), Gaps = 68/462 (14%)
Query: 259 VKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKN 318
V AA L K + + + T +++ + S T W + E + P
Sbjct: 489 VTSAAGLQKSLLSSTSTTTKITTGSSSAGTQSSTSNRLWA------EDSTEKEKDSVPTA 542
Query: 319 VTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEAS 378
VT + + ++A ++ ++ +SS + + + + S+ Q +A
Sbjct: 543 VTIPVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESES----QRKAR 598
Query: 379 RKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFK 438
+ ++ +ST + +QE AE+ + ++ R++ K + +++ QD K
Sbjct: 599 SRQARQSRRSTQGVTLTDLQE------AEKTIGRSRSTRTREQENEEKEKEEKEKQDKEK 652
Query: 439 NNVKKSQLPVQLDLGGMLTALEKKQHSQ---HAKQSSKPVVVSVGAVPVLSKECASGERG 495
KK + D K+++S+ Q +PV S P S S
Sbjct: 653 QEEKKESETSREDE-------YKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSL- 704
Query: 496 RRMSQMKTPHNPLDSSAPLMK--------KGKQREIPKAKKPTSLKKIILKERQERKQR- 546
SQ+ P++ + ++ + +G++RE K + S K I + R+ R++R
Sbjct: 705 YASSQLNRPNSLVGITSAYSRGITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRR 764
Query: 547 -------LQENAVSPAFTSDDTQDGESGGDDQFP-----EQAELSGPEGMDELISTPSVE 594
Q++ + DT++G + + Q E + S + D L+
Sbjct: 765 STGVSFWTQDSDENEQEQQSDTEEGSNKKETQTDSISRYETSSTSAGDRYDSLLGRSGSY 824
Query: 595 DKSEE--PPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEV---DACVTDL- 648
EE P + L++D + T F K++ + + ++ L ++ + +TDL
Sbjct: 825 SYLEERKPYSSRLEKD--------DSTDFKKLYEQILAE--NEKLKAQLHDTNMELTDLK 874
Query: 649 --LKELVRFQDRMYQKDPVKAKTKRRLVLGLR--EVLKHLKL 686
L++ + Q+R + ++ + + R L R E+ + LK+
Sbjct: 875 LQLEKATQRQERFADRSLLEMEKRERRALERRISEMEEELKM 916
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 37.7 bits (86), Expect = 0.046
Identities = 85/462 (18%), Positives = 182/462 (39%), Gaps = 68/462 (14%)
Query: 259 VKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKN 318
V AA L K + + + T +++ + S T W + E + P
Sbjct: 576 VTSAAGLQKSLLSSTSTTTKITTGSSSAGTQSSTSNRLWA------EDSTEKEKDSVPTA 629
Query: 319 VTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEAS 378
VT + + ++A ++ ++ +SS + + + + S+ Q +A
Sbjct: 630 VTIPVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESES----QRKAR 685
Query: 379 RKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFK 438
+ ++ +ST + +QE AE+ + ++ R++ K + +++ QD K
Sbjct: 686 SRQARQSRRSTQGVTLTDLQE------AEKTIGRSRSTRTREQENEEKEKEEKEKQDKEK 739
Query: 439 NNVKKSQLPVQLDLGGMLTALEKKQHSQ---HAKQSSKPVVVSVGAVPVLSKECASGERG 495
KK + D K+++S+ Q +PV S P S S
Sbjct: 740 QEEKKESETSREDE-------YKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSL- 791
Query: 496 RRMSQMKTPHNPLDSSAPLMK--------KGKQREIPKAKKPTSLKKIILKERQERKQR- 546
SQ+ P++ + ++ + +G++RE K + S K I + R+ R++R
Sbjct: 792 YASSQLNRPNSLVGITSAYSRGITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRR 851
Query: 547 -------LQENAVSPAFTSDDTQDGESGGDDQFP-----EQAELSGPEGMDELISTPSVE 594
Q++ + DT++G + + Q E + S + D L+
Sbjct: 852 STGVSFWTQDSDENEQEQQSDTEEGSNKKETQTDSISRYETSSTSAGDRYDSLLGRSGSY 911
Query: 595 DKSEE--PPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEV---DACVTDL- 648
EE P + L++D + T F K++ + + ++ L ++ + +TDL
Sbjct: 912 SYLEERKPYSSRLEKD--------DSTDFKKLYEQILAE--NEKLKAQLHDTNMELTDLK 961
Query: 649 --LKELVRFQDRMYQKDPVKAKTKRRLVLGLR--EVLKHLKL 686
L++ + Q+R + ++ + + R L R E+ + LK+
Sbjct: 962 LQLEKATQRQERFADRSLLEMEKRERRALERRISEMEEELKM 1003
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit 12A
isoform a [Homo sapiens]
Length = 1030
Score = 37.7 bits (86), Expect = 0.046
Identities = 85/462 (18%), Positives = 182/462 (39%), Gaps = 68/462 (14%)
Query: 259 VKPAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKN 318
V AA L K + + + T +++ + S T W + E + P
Sbjct: 576 VTSAAGLQKSLLSSTSTTTKITTGSSSAGTQSSTSNRLWA------EDSTEKEKDSVPTA 629
Query: 319 VTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEAS 378
VT + + ++A ++ ++ +SS + + + + S+ Q +A
Sbjct: 630 VTIPVAPTVVNAAASTTTLTTTTAGTVSSTTEVRERRRSYLTPVRDEESES----QRKAR 685
Query: 379 RKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFK 438
+ ++ +ST + +QE AE+ + ++ R++ K + +++ QD K
Sbjct: 686 SRQARQSRRSTQGVTLTDLQE------AEKTIGRSRSTRTREQENEEKEKEEKEKQDKEK 739
Query: 439 NNVKKSQLPVQLDLGGMLTALEKKQHSQ---HAKQSSKPVVVSVGAVPVLSKECASGERG 495
KK + D K+++S+ Q +PV S P S S
Sbjct: 740 QEEKKESETSREDE-------YKQKYSRTYDETYQRYRPVSTSSSTTPSSSLSTMSSSL- 791
Query: 496 RRMSQMKTPHNPLDSSAPLMK--------KGKQREIPKAKKPTSLKKIILKERQERKQR- 546
SQ+ P++ + ++ + +G++RE K + S K I + R+ R++R
Sbjct: 792 YASSQLNRPNSLVGITSAYSRGITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRR 851
Query: 547 -------LQENAVSPAFTSDDTQDGESGGDDQFP-----EQAELSGPEGMDELISTPSVE 594
Q++ + DT++G + + Q E + S + D L+
Sbjct: 852 STGVSFWTQDSDENEQEQQSDTEEGSNKKETQTDSISRYETSSTSAGDRYDSLLGRSGSY 911
Query: 595 DKSEE--PPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEV---DACVTDL- 648
EE P + L++D + T F K++ + + ++ L ++ + +TDL
Sbjct: 912 SYLEERKPYSSRLEKD--------DSTDFKKLYEQILAE--NEKLKAQLHDTNMELTDLK 961
Query: 649 --LKELVRFQDRMYQKDPVKAKTKRRLVLGLR--EVLKHLKL 686
L++ + Q+R + ++ + + R L R E+ + LK+
Sbjct: 962 LQLEKATQRQERFADRSLLEMEKRERRALERRISEMEEELKM 1003
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 37.4 bits (85), Expect = 0.060
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 329 ASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKK--- 385
+SS+ + S +SE+ S S NKEK I +K G + +E K+KK+K
Sbjct: 261 SSSSSSSSSSTETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHE 320
Query: 386 EKSTSKYEVLTVQEPPR 402
E S+S + +E PR
Sbjct: 321 ELSSSHHNREKAKEKPR 337
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 37.0 bits (84), Expect = 0.078
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 362 QKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEPPRIEDAEEFPNLAVASERRDR 421
Q KA DL+ + +N++KK + L + +ED + LAVAS+++
Sbjct: 1570 QAMKAQFERDLQTRD--EQNEEKKRLLIKQVRELEAE----LEDERKQRALAVASKKKME 1623
Query: 422 IETPKFQSKQQPQDNFKNNVKKSQLPVQLDLGGMLTALEKKQHSQ-----HAKQSSKPVV 476
I+ +++ + + ++ V K +Q + LE+ + S+ +K+S K +
Sbjct: 1624 IDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLK 1683
Query: 477 VSVGAVPVLSKECASGERGRRMSQMK 502
+ L +E AS ER RR ++ +
Sbjct: 1684 SLEAEILQLQEELASSERARRHAEQE 1709
Score = 32.0 bits (71), Expect = 2.5
Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 34/226 (15%)
Query: 352 NKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSK------------YEVLTVQE 399
N ++ Q A D E +ASR +K+++ S+ + Q+
Sbjct: 1107 NNALKVVRELQAQIAELQEDFESEKASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQ 1166
Query: 400 PPRIEDAEEFPNLAVASERRDRIETPKFQSKQQ--------------PQDNFKNNVKKSQ 445
R + +E L A E + + Q +Q FK N++K++
Sbjct: 1167 ELRTKREQEVAELKKALEEETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNK 1226
Query: 446 LPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKECASGERGRRMSQMKTP- 504
++ D A E K Q +S V L + + G+R R K
Sbjct: 1227 QGLETD--NKELACEVKVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKASK 1284
Query: 505 -HNPLDSSAPLMKKGKQREIPKAKKPTSLKKIILKERQERKQRLQE 549
N LD+ + L+++ +++ I AK SL+ + Q+ ++ LQE
Sbjct: 1285 LQNELDNVSTLLEEAEKKGIKFAKDAASLE----SQLQDTQELLQE 1326
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 36.6 bits (83), Expect = 0.10
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Query: 788 PRPQAPPSLPTQGPSCPAEDGPPALKEKEEPHYIE-------IWKKHLEAYSGCTLELEE 840
PRP+APP P GP A P + +E+EEP +E I LEA E+EE
Sbjct: 75 PRPRAPPGAPGPGPGSGA---PGSQEEEEEPGLVEGDPGDGAIEDPELEAIKARVREMEE 131
Query: 841 SLE 843
E
Sbjct: 132 EAE 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,364,610
Number of Sequences: 37866
Number of extensions: 1652906
Number of successful extensions: 7940
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 7525
Number of HSP's gapped (non-prelim): 679
length of query: 854
length of database: 18,247,518
effective HSP length: 111
effective length of query: 743
effective length of database: 14,044,392
effective search space: 10434983256
effective search space used: 10434983256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.