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Search of human proteins with 83313661
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|83313661 Rho GDP dissociation inhibitor (GDI) gamma [Homo
sapiens]
(225 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|83313661 Rho GDP dissociation inhibitor (GDI) gamma [Homo sap... 457 e-129
gi|4757768 Rho GDP dissociation inhibitor (GDI) alpha [Homo sapi... 245 3e-65
gi|56676393 Rho GDP dissociation inhibitor (GDI) beta [Homo sapi... 232 2e-61
gi|144953905 hypothetical protein LOC55138 [Homo sapiens] 32 0.57
gi|239742272 PREDICTED: hypothetical protein XP_002342469 isofor... 31 0.75
gi|239742270 PREDICTED: hypothetical protein XP_002342468 isofor... 31 0.75
gi|51466802 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|42658817 PREDICTED: hypothetical protein [Homo sapiens] 30 1.3
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 30 1.7
gi|89027871 PREDICTED: hypothetical protein [Homo sapiens] 30 1.7
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 30 2.2
gi|30795193 septin 10 isoform 2 [Homo sapiens] 30 2.2
gi|21945064 septin 10 isoform 1 [Homo sapiens] 30 2.2
gi|110349719 titin isoform N2-A [Homo sapiens] 29 2.8
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 29 2.8
gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi... 29 2.8
gi|89027820 PREDICTED: hypothetical protein [Homo sapiens] 29 2.8
gi|51466800 PREDICTED: hypothetical protein [Homo sapiens] 29 2.8
gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo sap... 29 2.8
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 29 2.8
gi|113419909 PREDICTED: hypothetical protein [Homo sapiens] 29 3.7
gi|4557439 cyclin-dependent kinase 3 [Homo sapiens] 29 3.7
gi|118402590 myosin XV [Homo sapiens] 28 6.3
gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens] 28 6.3
gi|53759103 importin 8 [Homo sapiens] 28 8.3
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 28 8.3
gi|149944526 additional sex combs like 3 [Homo sapiens] 28 8.3
>gi|83313661 Rho GDP dissociation inhibitor (GDI) gamma [Homo
sapiens]
Length = 225
Score = 457 bits (1176), Expect = e-129
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MLGLDACELGAQLLELLRLALCARVLLADKEGGPPAVDEVLDEAVPEYRAPGRKSLLEIR 60
MLGLDACELGAQLLELLRLALCARVLLADKEGGPPAVDEVLDEAVPEYRAPGRKSLLEIR
Sbjct: 1 MLGLDACELGAQLLELLRLALCARVLLADKEGGPPAVDEVLDEAVPEYRAPGRKSLLEIR 60
Query: 61 QLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVVMDLTGDLAVLKD 120
QLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVVMDLTGDLAVLKD
Sbjct: 61 QLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVVMDLTGDLAVLKD 120
Query: 121 QVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYRRGLRVDKTVYMVGSYGPSAQEYEFV 180
QVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYRRGLRVDKTVYMVGSYGPSAQEYEFV
Sbjct: 121 QVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYRRGLRVDKTVYMVGSYGPSAQEYEFV 180
Query: 181 TPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGLCICQDWKD 225
TPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGLCICQDWKD
Sbjct: 181 TPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGLCICQDWKD 225
>gi|4757768 Rho GDP dissociation inhibitor (GDI) alpha [Homo
sapiens]
Length = 204
Score = 245 bits (625), Expect = 3e-65
Identities = 116/190 (61%), Positives = 145/190 (76%)
Query: 36 AVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTR 95
A + DE Y+ P +KS+ EI++LD DD SL KYK LLG + + DP++PNV VT
Sbjct: 15 AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTG 74
Query: 96 LTLLSEQAPGPVVMDLTGDLAVLKDQVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYR 155
LTL+ APGP+ +DLTGDL K Q FVLKEGV+YR+KISF+V+REIVSG+K + HTYR
Sbjct: 75 LTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYR 134
Query: 156 RGLRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEW 215
+G+++DKT YMVGSYGP A+EYEF+TPVEEAP+G L RG Y + S FTDDD+T HLSWEW
Sbjct: 135 KGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEW 194
Query: 216 GLCICQDWKD 225
L I +DWKD
Sbjct: 195 NLTIKKDWKD 204
>gi|56676393 Rho GDP dissociation inhibitor (GDI) beta [Homo
sapiens]
Length = 201
Score = 232 bits (592), Expect = 2e-61
Identities = 112/188 (59%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 38 DEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLT 97
D+ LD + Y+ P +KSL E++++D DD SL KYK+ LLG P DP PNV VTRLT
Sbjct: 15 DDELDSKL-NYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVTRLT 73
Query: 98 LLSEQAPGPVVMDLTGDLAVLKDQVFVLKEGVDYRVKISFKVHREIVSGLKCLHHTYRRG 157
L+ E APGP+ MDLTGDL LK + VLKEG +YRVKI FKV+R+IVSGLK + HTYR G
Sbjct: 74 LVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTG 133
Query: 158 LRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGL 217
++VDK +MVGSYGP +EYEF+TPVEEAP+G L RG Y S FTDDD+ HLSWEW L
Sbjct: 134 VKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLSWEWNL 193
Query: 218 CICQDWKD 225
I ++W +
Sbjct: 194 SIKKEWTE 201
>gi|144953905 hypothetical protein LOC55138 [Homo sapiens]
Length = 464
Score = 31.6 bits (70), Expect = 0.57
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL I P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRPQDPQRKALLHIFSRKPPEKPLPNQKGSTESSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLSDRSATEMS 174
>gi|239742272 PREDICTED: hypothetical protein XP_002342469 isoform 2
[Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 0.75
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL I P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHIFSGKPPEKPLPNRKGSTESSVYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLADRSATEMS 174
>gi|239742270 PREDICTED: hypothetical protein XP_002342468 isoform 1
[Homo sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 0.75
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL I P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHIFSGKPPEKPLPNRKGSTESSVYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLADRSATEMS 174
>gi|51466802 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLADGSATEMS 174
>gi|42658817 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 30.4 bits (67), Expect = 1.3
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLADGSATEMS 174
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 30.0 bits (66), Expect = 1.7
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P ++ L + P DD +R L GPLPP+ D +L
Sbjct: 893 PPSADDNL-------KTPSKRQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 944
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 945 PSERQLTPLPPSAP 958
Score = 29.3 bits (64), Expect = 2.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPD--DRSLAKYKRVLLGPLPPAVDPSLPNV 91
PP+ D+ L + P + L + P D ++ L GPLPP+ D +L
Sbjct: 340 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTTAERLRGPLPPSADDNLKTP 392
Query: 92 QVTRLTLLSEQAP 104
+LT L AP
Sbjct: 393 SERQLTPLPPSAP 405
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 424 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 475
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 476 PSERQLTPLPPSAP 489
Score = 29.3 bits (64), Expect = 2.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPD--DRSLAKYKRVLLGPLPPAVDPSLPNV 91
PP+ D+ L + P + L + P D ++ L GPLPP+ D +L
Sbjct: 508 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTP 560
Query: 92 QVTRLTLLSEQAP 104
+LT L AP
Sbjct: 561 SERQLTPLPPSAP 573
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 935 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 986
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 987 PSERQLTPLPPSAP 1000
Score = 28.9 bits (63), Expect = 3.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPD--DRSLAKYKRVLLGPLPPAVDPSLPNV 91
PP+ D+ L + P + L + P D ++ L GPLPP+ D +L
Sbjct: 382 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTP 434
Query: 92 QVTRLTLLSEQAP 104
+LT L AP
Sbjct: 435 SERQLTPLPPSAP 447
Score = 28.9 bits (63), Expect = 3.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPD--DRSLAKYKRVLLGPLPPAVDPSLPNV 91
PP+ D+ L + P + L + P D ++ L GPLPP+ D +L
Sbjct: 466 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTP 518
Query: 92 QVTRLTLLSEQAP 104
+LT L AP
Sbjct: 519 SERQLTPLPPSAP 531
>gi|89027871 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 30.0 bits (66), Expect = 1.7
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 28 ADKEGGPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLG 78
A+ GP D+ E P + P RK+LL + P ++ L + Y RV G
Sbjct: 89 AEANPGPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTESSDYLRVASG 148
Query: 79 PLP-------PAVDPSLPNVQVTRLT 97
P+P P +DP L + T ++
Sbjct: 149 PMPVHTSSKRPRLDPILADRSATAMS 174
>gi|21314600 carcinoembryonic antigen-related cell adhesion
molecule 8 [Homo sapiens]
Length = 349
Score = 29.6 bits (65), Expect = 2.2
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQV 93
PP ++ EAVP A G++ LL + L D R YK + + + N Q+
Sbjct: 30 PPTTAQLTIEAVPSNAAEGKEVLLLVHNLPQDPRGYNWYKGETVDANRRIIGYVISNQQI 89
Query: 94 T 94
T
Sbjct: 90 T 90
>gi|30795193 septin 10 isoform 2 [Homo sapiens]
Length = 431
Score = 29.6 bits (65), Expect = 2.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 57 LEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVV 108
++I Q DD ++AK + G LP AV S+ V+V + + Q P VV
Sbjct: 211 VQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVV 262
>gi|21945064 septin 10 isoform 1 [Homo sapiens]
Length = 454
Score = 29.6 bits (65), Expect = 2.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 57 LEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVV 108
++I Q DD ++AK + G LP AV S+ V+V + + Q P VV
Sbjct: 234 VQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVV 285
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 29.3 bits (64), Expect = 2.8
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 30 KEGGPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLP 89
+E PPAV E+ + VPE R P + E+ P PP V P+LP
Sbjct: 9392 EESPPPAVPEIPKKKVPEERKPVPRKEEEV-------------------PPPPKV-PALP 9431
Query: 90 NVQVTRLTL-----LSEQAPGPVVMDLTGDLAVLKDQVFVLKEGVDYRVKISFKVHREIV 144
V + ++++AP P V++++ FV +E + + V +V R V
Sbjct: 9432 KKPVPEEKVAVPVPVAKKAPPPRAE--VSKKTVVEEKRFVAEEKLSFAVPQRVEVTRHEV 9489
Query: 145 S 145
S
Sbjct: 9490 S 9490
Score = 28.9 bits (63), Expect = 3.7
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 31 EGGPPAVDEVLDEAVPEYR---APGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPS 87
E PP V E E VPE + AP +K + ++ + + K+V P+PP P
Sbjct: 10575 ESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKV---PVPPPKKPE 10631
Query: 88 LPNVQV 93
+P +V
Sbjct: 10632 VPPTKV 10637
Score = 27.7 bits (60), Expect = 8.3
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 30 KEGGPPAVDEVLDEAVPEYRAPGRKSL----LEIRQLDPDDRSLAKYKRVLLGPLPPAVD 85
+E PP V EV+ +AVPE P K + ++ + P+++ ++ PPA
Sbjct: 10262 EEVAPPRVPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQK---KEAPPAKV 10318
Query: 86 PSLPNVQVTRLTLLSEQAPGPVVMD---LTGDLAVLKDQVFVLKEGVDYRV 133
P +P + L+ ++ P L ++V Q V+KE ++ V
Sbjct: 10319 PEVPKKVPEKKVLVPKKEAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEV 10369
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQV 93
PP+ D+ L P S L DD +L LL PLPP+ D +L
Sbjct: 332 PPSADDNLKTPPECLLTPLPPSALPSAPPSADD-NLKTRAECLLHPLPPSADDNLKTPSE 390
Query: 94 TRLTLLSEQAP 104
+LT L AP
Sbjct: 391 RQLTPLPPSAP 401
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 378 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 429
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 430 PSERQLTPLPPSAP 443
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 420 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 471
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 472 PSERQLTPLPPSAP 485
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 875 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 926
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 927 PSERQLTPLPPSAP 940
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 917 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 968
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 969 PSERQLTPLPPSAP 982
Score = 28.5 bits (62), Expect = 4.8
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQV 93
PP+ D+ L + P + L + DD +R L GPLPP+ D +L
Sbjct: 504 PPSADDNL-------KTPSERQLTALPP-SADDNIKTPAER-LRGPLPPSADDNLKTPSE 554
Query: 94 TRLTLLSEQAP 104
+LT L AP
Sbjct: 555 RQLTPLPPSAP 565
>gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo
sapiens]
Length = 464
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L +++ RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTESSEHLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P VDP L + T ++
Sbjct: 154 TTSKRPRVDPVLADRSATEMS 174
>gi|89027820 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P +DP L + T ++
Sbjct: 154 TTSKRPRLDPVLADRSATEMS 174
>gi|51466800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P +DP L + T ++
Sbjct: 154 TTSKRPRLDPVLADRSATEMS 174
>gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo
sapiens]
Length = 464
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P +DP L + T ++
Sbjct: 154 TTSKRPRLDPVLADRSATEMS 174
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAKYKRVLLGPLPPAVDPSLPNVQV 93
PP+ D+ L P S L DD +L LL PLPP+ D +L
Sbjct: 332 PPSADDNLKTPPECLLTPLPPSALPSAPPSADD-NLKTRAECLLHPLPPSADDNLKTPSE 390
Query: 94 TRLTLLSEQAP 104
+LT L AP
Sbjct: 391 RQLTPLPPSAP 401
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 378 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 429
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 430 PSERQLTPLPPSAP 443
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 420 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 471
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 472 PSERQLTPLPPSAP 485
Score = 29.3 bits (64), Expect = 2.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 34 PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDP---DDRSLAKYKRVLLGPLPPAVDPSLPN 90
PP+ D+ L + P + L + P DD +R L GPLPP+ D +L
Sbjct: 462 PPSADDNL-------KTPSERQLTPLPPSAPPSADDNIKTPAER-LRGPLPPSADDNLKT 513
Query: 91 VQVTRLTLLSEQAP 104
+LT L AP
Sbjct: 514 PSERQLTPLPPSAP 527
>gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 28.9 bits (63), Expect = 3.7
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 16/81 (19%)
Query: 33 GPPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSL---------AKYKRVLLGPLP-- 81
GP D+ E P + P RK+LL + P ++ L + Y RV GP+P
Sbjct: 94 GPLNKDKGEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTESSDYLRVARGPMPVH 153
Query: 82 -----PAVDPSLPNVQVTRLT 97
P +DP L T ++
Sbjct: 154 TTCKRPRMDPVLSGRSATEMS 174
>gi|4557439 cyclin-dependent kinase 3 [Homo sapiens]
Length = 305
Score = 28.9 bits (63), Expect = 3.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 27 LADKEGG-PPAVDEVLDEAVPEYRAPGRKSLLEIRQLDPDDRSLAK 71
L D +G P + L+E VP GR L+++ Q DP R AK
Sbjct: 233 LPDYKGSFPKWTRKGLEEIVPNLEPEGRDLLMQLLQYDPSQRITAK 278
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 28.1 bits (61), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 76 LLGPLP-PAVDPSLPNVQVTRLTLLSEQAPGP 106
LLGP+P P + P P +TR+ L PGP
Sbjct: 967 LLGPVPSPTLQPEDPAADMTRVFLGRHHEPGP 998
>gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]
Length = 740
Score = 28.1 bits (61), Expect = 6.3
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 76 LLGPLPPAVDPSLPNVQVTRLTLLSEQAPGPVVMDLTGDLAVL 118
LLGP P + D S+ + Q + T + QAP P + + G++ VL
Sbjct: 482 LLGPFPTSWDRSISSPQPGQRTHATPQAPNPSLSE--GEIPVL 522
>gi|53759103 importin 8 [Homo sapiens]
Length = 1037
Score = 27.7 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 18 RLALCARVLLADKEGGPPAVDEVLDEAVPE--YRAPGRKSLLEIRQL-DPDDRSLAK 71
++ + +L + + PPAVD V+ + VP + G K + RQL + +DRS A+
Sbjct: 835 KMCIIGLSILLELQNRPPAVDAVVGQIVPSILFLFLGLKQVCATRQLVNREDRSKAE 891
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 27.7 bits (60), Expect = 8.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 81 PPAVDPSLPNVQVTRLTLLSEQAPGPV 107
PPAV P LP ++VT L+ P PV
Sbjct: 824 PPAVHPPLPPLRVTSTNPLTPTPPPPV 850
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 27.7 bits (60), Expect = 8.3
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 79 PLPPAVDPSLPNVQVTRLTLLSEQAPGPVVMDL---------TGDLAVLKDQVFVLKEGV 129
P PP + P LPN +V S+Q PV M+ TG + +K + +EG+
Sbjct: 2036 PPPPPLPPPLPNAEVP-----SDQKQPPVTMETTKRLSWPQSTGICSNIKSEPLSFEEGL 2090
Query: 130 DYRVKISFK 138
++ K
Sbjct: 2091 SSSCELGMK 2099
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.141 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,827,091
Number of Sequences: 37866
Number of extensions: 443201
Number of successful extensions: 1200
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 54
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.