Guide to the Human Genome
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Name: FAM90A3 Sequence: fasta or formatted (464aa) NCBI GI: 42658817
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         48           3
 C cysteine            2.2         10           1
 D aspartate           3.4         16           1
 E glutamate           5.8         27           2
 F phenylalanine       1.7          8           1
 G glycine             6.9         32           2
 H histidine           2.8         13           2
 I isoleucine          0.9          4           1
 K lysine              6.2         29           2
 L leucine             8.4         39           2
 M methionine          1.7          8           2
 N asparagine          1.9          9           1
 P proline            13.8         64           3
 Q glutamine           5.6         26           2
 R arginine            7.8         36           2
 S serine             10.3         48           5
 T threonine           4.1         19           2
 V valine              4.7         22           2
 W tryptophan          0.9          4           1
 Y tyrosine            0.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
FAM90A5               0.994   PREDICTED: hypothetical protein 
FAM90A15              0.986   PREDICTED: hypothetical protein LOC389630 
FAM90A14              0.984   PREDICTED: hypothetical protein 
FAM90A13              0.984   PREDICTED: hypothetical protein 
FAM90A9               0.977   PREDICTED: hypothetical protein 
FAM90A8               0.973   PREDICTED: hypothetical protein 
FAM90A19              0.971   PREDICTED: hypothetical protein 
FAM90A18              0.971   PREDICTED: hypothetical protein LOC441326 
FAM90A12              0.969   PREDICTED: hypothetical protein 
FAM90A10              0.963   PREDICTED: hypothetical protein LOC441328 
FAM90A7               0.962   hypothetical protein LOC441317 
FAM90A20              0.947   PREDICTED: hypothetical protein 
FAM90A20              0.944   PREDICTED: hypothetical protein 
LOC100287045          0.935   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.935   PREDICTED: hypothetical protein XP_002342468 isofor...
FAM90A1               0.918   hypothetical protein LOC55138 
LOC646508             0.217   PREDICTED: hypothetical LOC646508 
LOC646508             0.217   PREDICTED: hypothetical LOC646508 
LOC646508             0.163   PREDICTED: hypothetical LOC646508 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.026   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
PCLO                  0.025   piccolo isoform 2 
PCLO                  0.025   piccolo isoform 1 
ATN1                  0.022   atrophin-1 
ATN1                  0.022   atrophin-1 
PRB1                  0.022   proline-rich protein BstNI subfamily 1 isoform 1 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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