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Search of human proteins with 82659107
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 426 e-120
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 378 e-105
gi|19923483 GTPase Rab14 [Homo sapiens] 252 1e-67
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 218 2e-57
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 214 6e-56
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 178 3e-45
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 177 8e-45
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 172 2e-43
gi|116812567 RAB25 [Homo sapiens] 171 6e-43
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 168 3e-42
gi|50234889 RAB43 protein [Homo sapiens] 168 4e-42
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 167 8e-42
gi|254281345 RAB2B protein isoform 2 [Homo sapiens] 166 2e-41
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 165 2e-41
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 164 5e-41
gi|16933567 mel transforming oncogene [Homo sapiens] 164 7e-41
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 162 2e-40
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 162 2e-40
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 162 2e-40
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 161 4e-40
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 158 4e-39
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 152 2e-37
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 151 3e-37
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] 150 6e-37
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 150 8e-37
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 146 1e-35
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 146 1e-35
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 146 1e-35
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 145 2e-35
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 426 bits (1096), Expect = e-120
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
Sbjct: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP 180
NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP 180
Query: 181 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC 213
ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
Sbjct: 181 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC 213
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 378 bits (970), Expect = e-105
Identities = 186/213 (87%), Positives = 198/213 (92%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
M+ETYDFLFKFLVIG+AGTGKSCLLHQFIE KFK DSNHTIGVEFGS+++NVGGK VKLQ
Sbjct: 6 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 65
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYN+L WLTDAR LAS NIV+ILCG
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP 180
NKKDLD +REVTFLEASRFAQENELMFLETSALTGENVEEAF++CAR ILNKI+SGELDP
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP 185
Query: 181 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC 213
ERMGSGIQYGDA+LRQLR PR AQA Q CGC
Sbjct: 186 ERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC 218
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 252 bits (644), Expect = 1e-67
Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 11/214 (5%)
Query: 5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 64
Y ++FK+++IG G GKSCLLHQF E KF D HTIGVEFG+R++ V G+ +KLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 65 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 124
AGQERFR+VTRSYYRGAAGAL+VYDIT R TYN L++WLTDAR L +PN V+IL GNK D
Sbjct: 68 AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127
Query: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184
L+ +R+VT+ EA +FA+EN L+FLE SA TGENVE+AFL+ A+ I I G LD
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
Query: 185 SGIQYGDASLRQLRQPRSAQAVA-PQP----CGC 213
SG+Q+ ++ P+ + + PQP CGC
Sbjct: 188 SGVQHKPSA------PQGGRLTSEPQPQREGCGC 215
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 218 bits (556), Expect = 2e-57
Identities = 108/187 (57%), Positives = 137/187 (73%)
Query: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
TY +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+VN+ GK +KLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR +S N+V++L GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
Query: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
DL+ R+V E FA+E+ L+F+ETSA T NVEEAF+ A+ I KI G D
Sbjct: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181
Query: 184 GSGIQYG 190
+GI+ G
Sbjct: 182 ANGIKIG 188
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 214 bits (544), Expect = 6e-56
Identities = 104/186 (55%), Positives = 134/186 (72%)
Query: 5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 64
Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + GK +KLQIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 65 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 124
AGQE FRS+TRSYYRGAAGALLVYDIT R+T+N L WL DAR ++ N+V++L GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184
L+ REV E FA+E+ L+F+ETSA T NVEEAF+ A+ I KI G D
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 185 SGIQYG 190
+GI+ G
Sbjct: 183 NGIKIG 188
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 178 bits (452), Expect = 3e-45
Identities = 89/160 (55%), Positives = 112/160 (70%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
+ YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V GKT+K QIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQER+R++T +YYRGA GALLVYDI TY ++ WL + R A NIV++L GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAF 162
DL R V EA FA++N L F+ETSAL NVEEAF
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF 165
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 177 bits (448), Expect = 8e-45
Identities = 92/171 (53%), Positives = 117/171 (68%), Gaps = 4/171 (2%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
+ YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R + V GKT+K QIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQER+R++T +YYRGA GALLVYDI TY ++ WL + R A NIV++L GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKI 173
DL R V EA FA++N L F+ETSAL NVE AF +TIL +I
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF----QTILTEI 172
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 172 bits (435), Expect = 2e-43
Identities = 83/186 (44%), Positives = 125/186 (67%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+TYD+LFK L+IG +G GK+CLL +F E+ F TIG++F R + + GK +KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFR++T +YYRGA G +LVYDIT+ ++++++ W+ + AS ++ ++ G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP 180
NK D++ +R+V+ + A + + FLETSA + NVEEAF AR I+ K++ D
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180
Query: 181 ERMGSG 186
G+G
Sbjct: 181 NSAGAG 186
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 171 bits (432), Expect = 6e-43
Identities = 95/203 (46%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
E Y+F+FK ++IG +G GK+ LL +F N+F DS TIGVEF +R V +G VK QIW
Sbjct: 7 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 66
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAG ER+R++T +YYRGA GALLV+D+T +TY + WL + A IVV+L GNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPER 182
DL REV EA FA+ N L+FLETSAL NVE AF + I K+ + R
Sbjct: 127 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIR 186
Query: 183 MGSGIQYGDASLRQLRQPRSAQA 205
+ I G A Q P +A
Sbjct: 187 T-NAITLGSAQAGQEPGPGEKRA 208
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 168 bits (426), Expect = 3e-42
Identities = 82/176 (46%), Positives = 116/176 (65%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
M YD+LFK L+IG +G GKSCLL +F ++ + + TIGV+F R + + GKT+KLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFR++T SYYRGA G ++VYD+T +E++N++ WL + AS N+ +L G
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSG 176
NK DL ++ V + A FA + FLETSA NVE++F+ A I ++ G
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 168 bits (425), Expect = 4e-42
Identities = 87/187 (46%), Positives = 119/187 (63%), Gaps = 2/187 (1%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
E YDFLFK +++G A GK+C++ +F F + TIGV+F + + + GK VKLQIW
Sbjct: 13 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQERFR++T+SYYR A GA+L YDIT R ++ S+ W+ D R A NIV +L GNK
Sbjct: 73 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132
Query: 123 KDLDPEREVTFLEASRFAQENELM-FLETSALTGENVEEAFLKCARTILNKIDSGELDPE 181
DL REV+ EA A+ +++ +ETSA NVEEAFL+ A ++ + G L E
Sbjct: 133 SDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR-HGGPLFSE 191
Query: 182 RMGSGIQ 188
+ IQ
Sbjct: 192 KSPDHIQ 198
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 167 bits (422), Expect = 8e-42
Identities = 83/176 (47%), Positives = 114/176 (64%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
M YD+LFK L+IG +G GKSCLL +F ++ + + TIGV+F R + + GKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFR++T SYYRGA G ++VYD+T +E+Y ++ WL + AS N+ +L G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSG 176
NK DL ++ V A FA + FLETSA NVE+AF+ A I ++ G
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 176
>gi|254281345 RAB2B protein isoform 2 [Homo sapiens]
Length = 170
Score = 166 bits (419), Expect = 2e-41
Identities = 83/142 (58%), Positives = 103/142 (72%)
Query: 49 VVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART 108
+VN+ GK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR
Sbjct: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
Query: 109 LASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCART 168
+S N+V++L GNK DL+ R+V E FA+E+ L+F+ETSA T NVEEAF+ A+
Sbjct: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
Query: 169 ILNKIDSGELDPERMGSGIQYG 190
I KI G D +GI+ G
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIG 142
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 165 bits (418), Expect = 2e-41
Identities = 79/172 (45%), Positives = 117/172 (68%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+ YD LFK L+IG +G GK+CL+ +F E+ F TIG++F R V++ GK +KLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
+WDTAGQERF+++T +YYRGA G +LVYDIT +++ ++ W+ + AS + +L G
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
NK D++ +R+V +A + A+E+ + F ETSA + NV+EAF AR IL K
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 164 bits (415), Expect = 5e-41
Identities = 79/170 (46%), Positives = 111/170 (65%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
E YDFLFK ++IG+AG GK+CL+ +F + F TIGV+F + V + G+ VKLQIW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQERFRS+T+SYYR A +L YDIT E++ L WL + AS ++ +L GNK
Sbjct: 64 DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNK 123
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
DL REV+ A F++ ++ +LETSA +NVE+ FL A ++++
Sbjct: 124 IDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 164 bits (414), Expect = 7e-41
Identities = 78/174 (44%), Positives = 118/174 (67%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+TYD+LFK L+IG +G GK+C+L +F E+ F TIG++F R + + GK +KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFR++T +YYRGA G +LVYDIT+ ++++++ W+ + AS ++ ++ G
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
NK D++ +R+V+ + A + + F+ETSA NVE AF AR I K+D
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 174
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 162 bits (411), Expect = 2e-40
Identities = 78/172 (45%), Positives = 115/172 (66%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+ YD LFK L+IG +G GK+CL+ +F E+ F TIG++F R V++ GK +KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
+WDTAGQERF+++T +YYRGA G +L YDIT +++ ++ W+ AS + +L G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
NK D++ +R+V +A + A+E+ + F ETSA + NV+EAF AR IL K
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 162 bits (411), Expect = 2e-40
Identities = 78/172 (45%), Positives = 115/172 (66%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+ YD LFK L+IG +G GK+CL+ +F E+ F TIG++F R V++ GK +KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
+WDTAGQERF+++T +YYRGA G +L YDIT +++ ++ W+ AS + +L G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
NK D++ +R+V +A + A+E+ + F ETSA + NV+EAF AR IL K
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 162 bits (411), Expect = 2e-40
Identities = 78/172 (45%), Positives = 115/172 (66%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA+ YD LFK L+IG +G GK+CL+ +F E+ F TIG++F R V++ GK +KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
+WDTAGQERF+++T +YYRGA G +L YDIT +++ ++ W+ AS + +L G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172
NK D++ +R+V +A + A+E+ + F ETSA + NV+EAF AR IL K
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 296
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 161 bits (407), Expect = 4e-40
Identities = 82/186 (44%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 7 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVG-GKTVKLQIWDTA 65
+ F+ +VIG + GKSCL+ +F E +F Q S+ T+GV+F SR+V + GK +KLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 66 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NIVVILCGNKKD 124
GQERFRS+TR+YYR + G LL++DIT+R ++ ++ WL + + P IV +L G+K D
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
Query: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184
LD +R+VT EA + A + ++ETSA NVE+AF R I + GE+ +
Sbjct: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGW 186
Query: 185 SGIQYG 190
G++ G
Sbjct: 187 EGVKSG 192
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 158 bits (399), Expect = 4e-39
Identities = 79/181 (43%), Positives = 118/181 (65%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
+TYD LFK L+IG +G GK+C+L +F ++ F TIG++F + V + GK +KLQIW
Sbjct: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQERF ++T SYYRGA G +LVYDIT+ +++ +++ WL + A+ ++ +L GNK
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPER 182
D+D +R V + + A+E+ + F ETSA N+E+AFL A IL K E + E
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
Query: 183 M 183
+
Sbjct: 184 V 184
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 152 bits (384), Expect = 2e-37
Identities = 77/167 (46%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
Query: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSN-HTIGVEFGSRVVNVGGKTVKLQIW 62
+YD K +++G G GK+C L QF + F + T+G++F ++VV V G VKLQIW
Sbjct: 25 SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQERFRSVT +YYR A LL+YDIT++ +++++ AWLT+ A ++V++L GNK
Sbjct: 85 DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
D+ ER + + A+E + FLETSA TG NVE AFL A+ +
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 151 bits (382), Expect = 3e-37
Identities = 70/169 (41%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
Query: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62
E +D+LFK ++IG + GK+C++ F + + +TIGV+F R +++ GK VK+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 63 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122
DTAGQERFR++T+SYYR A A++ YD+T R T+ S+ W+ + + N+V++L GNK
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 123 KDLDPEREVTFLEASRFAQENELM-FLETSALTGENVEEAFLKCARTIL 170
DL +R V F +A A++ L+ LETSA +N+EE F+ A+ ++
Sbjct: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELI 180
>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 150 bits (380), Expect = 6e-37
Identities = 81/196 (41%), Positives = 121/196 (61%), Gaps = 6/196 (3%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKF----KQDSNHTIGVEFGSRVVNVG-GK 55
M + + F+ +VIG + GKSCLLH+F + +F + T+GV+F SR++ + GK
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK 60
Query: 56 TVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NI 114
+KLQ+WDTAGQERFRS+TRSYYR + G LV+DIT+R ++ + WL +A+ P I
Sbjct: 61 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI 120
Query: 115 VVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 174
V +L G+K DL +R+VT EA + + + + ++ETSA NVEE+F R I I
Sbjct: 121 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK 180
Query: 175 SGELDPERMGSGIQYG 190
GE+ + G++ G
Sbjct: 181 KGEICIQDGWEGVKSG 196
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 150 bits (379), Expect = 8e-37
Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 8 LFKFLVIGSAGTGKSCLLHQFIENKFKQDS-NHTIGVEFGSRVVNVGGKTVKLQIWDTAG 66
L K +++G +G GK+ LL QF + KF S + T+G+ F ++VV V G VKLQIWDTAG
Sbjct: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 67 QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLD 126
QERFRSVT +YYR A LL+YDIT++ +++++ AWLT+ A ++V++L GNK D+
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
Query: 127 PEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
ER + + A+E + FLETSA TG NVE AFL A+ +
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 146 bits (369), Expect = 1e-35
Identities = 71/161 (44%), Positives = 104/161 (64%)
Query: 9 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
FK +++G + GKS L+ +F++ +F + TIG F ++ V + TVK +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 69 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPE 128
R+ S+ YYRGA A++VYDIT+ +T+ W+ + + ASPNIV+ L GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 129 REVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
R V F EA +A +N L+F+ETSA T NV E F+ A+ +
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 146 bits (369), Expect = 1e-35
Identities = 71/161 (44%), Positives = 104/161 (64%)
Query: 9 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
FK +++G + GKS L+ +F++ +F + TIG F ++ V + TVK +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 69 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPE 128
R+ S+ YYRGA A++VYDIT+ +T+ W+ + + ASPNIV+ L GNK DL +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 141
Query: 129 REVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
R V F EA +A +N L+F+ETSA T NV E F+ A+ +
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 146 bits (369), Expect = 1e-35
Identities = 73/169 (43%), Positives = 107/169 (63%), Gaps = 1/169 (0%)
Query: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 65
DF + ++IGS G GK+ L+ +F ++ F + T+GV+F + V + GK ++LQIWDTA
Sbjct: 40 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99
Query: 66 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 125
GQERF S+T +YYR A G +LVYDIT +ET++ L W+ AS + ++L GNK D
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159
Query: 126 DPEREVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILNKI 173
+ +RE+T + +FAQ+ + F E SA NV+E FLK IL K+
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 208
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 145 bits (367), Expect = 2e-35
Identities = 71/161 (44%), Positives = 104/161 (64%)
Query: 9 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
FK +++G + GKS L+ +F++ +F + TIG F ++ V + TVK +IWDTAGQE
Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 80
Query: 69 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPE 128
R+ S+ YYRGA A++VYDIT+ E++ W+ + + ASPNIV+ L GNK DL +
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 140
Query: 129 REVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169
R V F EA +A +N L+F+ETSA T NV E F+ A+ +
Sbjct: 141 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 145 bits (367), Expect = 2e-35
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 1 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60
MA YD LFK L+IG +G GKS LL +F +N F TIGV+F R V + G+ VKLQ
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120
IWDTAGQERFR++T +YYRG G ++VYD+TS E++ ++ WL + ++ IL G
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Query: 121 NKKDLDPEREVTFLE-ASRFAQENELMFLETSALTGENVEEAF 162
NK D DPER+V E A +FA + + ETSA NVEE F
Sbjct: 120 NKND-DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,443,884
Number of Sequences: 37866
Number of extensions: 286067
Number of successful extensions: 1143
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 768
Number of HSP's gapped (non-prelim): 261
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.