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Search of human proteins with 81158080
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|81158080 cystin 1 [Homo sapiens]
(158 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|81158080 cystin 1 [Homo sapiens] 318 9e-88
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 42 2e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 41 4e-04
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 40 8e-04
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 40 8e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 8e-04
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat... 40 0.001
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat... 40 0.001
gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulat... 40 0.001
gi|50511941 EMI domain containing 1 [Homo sapiens] 40 0.001
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 39 0.001
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 39 0.001
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|148762978 similar to CG15216-PA [Homo sapiens] 39 0.002
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.002
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.002
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 39 0.002
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 39 0.002
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 39 0.002
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens] 39 0.002
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 38 0.003
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 38 0.003
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 38 0.003
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 38 0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.004
gi|148833504 interleukin 16 isoform 2 [Homo sapiens] 37 0.005
gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens] 37 0.005
>gi|81158080 cystin 1 [Homo sapiens]
Length = 158
Score = 318 bits (816), Expect = 9e-88
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSP 60
MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSP
Sbjct: 1 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSP 60
Query: 61 VAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG 120
VAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG
Sbjct: 61 VAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG 120
Query: 121 NVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREYCR 158
NVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREYCR
Sbjct: 121 NVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREYCR 158
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/123 (31%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 16 RSPESLPAGPGAAALEGGTRRRV----PVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETL 71
RSP PAG L G RR V PV A P + P +PSP PP
Sbjct: 390 RSPSQSPAGTPCPVLSLGARRGVTLPCPVPAEAAPRDFCQRFPALEPSPRQPPARAPRPS 449
Query: 72 RLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSG--NVSEAPGSG 129
L L ++ W PP AP PA P A S+ A + HP + V PG
Sbjct: 450 PDLPAPL-DACPWAPPVYAP--PAAPGPYAAWTSSRPARPAPLSHPTARAFQVPRRPGHA 506
Query: 130 RKK 132
++
Sbjct: 507 ARR 509
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 41.2 bits (95), Expect = 4e-04
Identities = 45/139 (32%), Positives = 53/139 (38%), Gaps = 31/139 (22%)
Query: 16 RSPESLPAGPGAAALEGGTRRRVPVAAAEV-PGAAAEEAPGRDPSPVAPPDGRDETLRLL 74
R+PE A GA L P AA P A AE APG P P PP GR
Sbjct: 46 RTPEVRAAAAGA--LGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEP--PPAGR------- 94
Query: 75 DELLAESAAWGPPE---PAPRRP----------ARLRPTAVAGSAVCAEQSTEGHPGSGN 121
A GP P+PRRP A+LRP + CA +G
Sbjct: 95 ----ARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG- 149
Query: 122 VSEAPGSGRKKPERPAAIS 140
E +G KP PAA++
Sbjct: 150 -PEPAPAGPAKPAGPAALA 167
Score = 32.7 bits (73), Expect = 0.13
Identities = 35/111 (31%), Positives = 37/111 (33%), Gaps = 22/111 (19%)
Query: 22 PAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETLRLLDELLAES 81
P GAAA P A A AAA P P+ +A P G
Sbjct: 241 PPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA------------ 288
Query: 82 AAWGPPEPAPRRPARLRPTAVA---GSAVCAEQSTEGHPGSGNVSEAPGSG 129
GPP AP P P A A GSA A G VS PG G
Sbjct: 289 ---GPPTAAPAVP----PPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG 332
Score = 27.3 bits (59), Expect = 5.6
Identities = 33/130 (25%), Positives = 38/130 (29%), Gaps = 20/130 (15%)
Query: 18 PESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPP-DGRDETLRLLDE 76
PE PAGP A +AA PG PG P P P G +TL
Sbjct: 150 PEPAPAGPAKPA------GPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAA 203
Query: 77 LLAESAAWGP-------------PEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVS 123
LL A P P P P P + T A P +
Sbjct: 204 LLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAP 263
Query: 124 EAPGSGRKKP 133
AP + P
Sbjct: 264 AAPAAAPPPP 273
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 40.0 bits (92), Expect = 8e-04
Identities = 45/165 (27%), Positives = 56/165 (33%), Gaps = 39/165 (23%)
Query: 1 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAA--------AEV-PGAAAE 51
M SG ++ + AGPG A GG+ VAA AEV PGA E
Sbjct: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTA---GGSENGSEVAAQPAGLSGPAEVGPGAVGE 57
Query: 52 EAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQ 111
P + P A P G G EP + PT V GSA
Sbjct: 58 RTPRKKEPPRASPPG------------------GLAEPPGSAGPQAGPTVVPGSAT---- 95
Query: 112 STEGHPGSGNVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREY 156
P ++E P R + A + Y +E L E EY
Sbjct: 96 -----PMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEY 135
Score = 28.5 bits (62), Expect = 2.5
Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 23/141 (16%)
Query: 10 RTLRRRRSPESLPAG-----PGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPS--PVA 62
RT R++ P + P G PG+A + G VP +A + AE GR S A
Sbjct: 58 RTPRKKEPPRASPPGGLAEPPGSAGPQAGPTV-VPGSATPMETGIAETPEGRRTSRRKRA 116
Query: 63 PPDGR--DETLRLL--DELLAESAAWG-----------PPEPAPRRPARLRPTAVAGSAV 107
+ R DE+L L DE +E PP+ P P +G A
Sbjct: 117 KVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGQAG 176
Query: 108 CAEQSTEGHPGSGNVSEAPGS 128
+ + G G G S G+
Sbjct: 177 GLQDDSSGGYGDGQASGVEGA 197
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 40.0 bits (92), Expect = 8e-04
Identities = 45/165 (27%), Positives = 56/165 (33%), Gaps = 39/165 (23%)
Query: 1 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAA--------AEV-PGAAAE 51
M SG ++ + AGPG A GG+ VAA AEV PGA E
Sbjct: 1 MLSGKKAAAAAAAAAAAATGTEAGPGTA---GGSENGSEVAAQPAGLSGPAEVGPGAVGE 57
Query: 52 EAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQ 111
P + P A P G G EP + PT V GSA
Sbjct: 58 RTPRKKEPPRASPPG------------------GLAEPPGSAGPQAGPTVVPGSAT---- 95
Query: 112 STEGHPGSGNVSEAPGSGRKKPERPAAISYDHSEEGLMASIEREY 156
P ++E P R + A + Y +E L E EY
Sbjct: 96 -----PMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEY 135
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.0 bits (92), Expect = 8e-04
Identities = 33/124 (26%), Positives = 43/124 (34%), Gaps = 15/124 (12%)
Query: 15 RRSPES--LPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETLR 72
RR+PE+ P PGA L+ G+ R PV PG P G D
Sbjct: 1119 RRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGG-------------GPGSGVDAKAG 1165
Query: 73 LLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSGRKK 132
+D + P P +P RL P A + G P S + SG
Sbjct: 1166 WVDNTRPQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEGEPGAPDSRAGGDTALSGDGD 1225
Query: 133 PERP 136
P +P
Sbjct: 1226 PPKP 1229
Score = 35.0 bits (79), Expect = 0.027
Identities = 37/115 (32%), Positives = 42/115 (36%), Gaps = 37/115 (32%)
Query: 15 RRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETLRLL 74
R S LP P A+A P + GAAA + PGR P P APP
Sbjct: 743 RGSLADLPMAPPASA--------PPEFLDPLMGAAAPQYPGRGPPP-APP---------- 783
Query: 75 DELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSG 129
PP P PR PA + SAV + PGSG S P G
Sbjct: 784 -----------PPPPPPRAPADPAASPDPPSAVAS-------PGSGLSSPGPKPG 820
Score = 30.0 bits (66), Expect = 0.86
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 8 SSRTLRRRRSPESLPAGP-GAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDG 66
+S ++ R S SL P G RR P A+ GAA EA G A DG
Sbjct: 1249 NSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPWEGADA-GAAGGEAGGAGAPGPAEEDG 1307
Query: 67 RDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAV 102
DE DE E AA PR P R R V
Sbjct: 1308 EDED---EDEEEDEEAAAPGAAAGPRGPGRARAAPV 1340
Score = 29.3 bits (64), Expect = 1.5
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 17 SPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDE 69
SPE G GAA EG R R P + PGA P DP P+ P R++
Sbjct: 831 SPEGAFPGGGAAEEEGVPRPRAPPEPPD-PGA---PRPPPDPGPLPLPGPREK 879
>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform a [Homo sapiens]
Length = 629
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 2 GSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAP-----GR 56
G G + + + P S P P A + P +A+ +PG A+ P GR
Sbjct: 492 GPGPPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGR 551
Query: 57 DPSPVAPPDGRDETLRLLDELLAESAAWGP-------PEPAPRRPA 95
PSP +PP EL+ S GP P PAP+ PA
Sbjct: 552 PPSPTSPPP---------PELMDVSLVGGPADCSPPHPAPAPQHPA 588
>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform c [Homo sapiens]
Length = 601
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 2 GSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAP-----GR 56
G G + + + P S P P A + P +A+ +PG A+ P GR
Sbjct: 464 GPGPPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGR 523
Query: 57 DPSPVAPPDGRDETLRLLDELLAESAAWGP-------PEPAPRRPA 95
PSP +PP EL+ S GP P PAP+ PA
Sbjct: 524 PPSPTSPPP---------PELMDVSLVGGPADCSPPHPAPAPQHPA 560
>gi|5921999 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform b [Homo sapiens]
Length = 589
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 2 GSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAP-----GR 56
G G + + + P S P P A + P +A+ +PG A+ P GR
Sbjct: 452 GPGPPITDCEMNSPQVPPSQPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRYLGR 511
Query: 57 DPSPVAPPDGRDETLRLLDELLAESAAWGP-------PEPAPRRPA 95
PSP +PP EL+ S GP P PAP+ PA
Sbjct: 512 PPSPTSPPP---------PELMDVSLVGGPADCSPPHPAPAPQHPA 548
>gi|50511941 EMI domain containing 1 [Homo sapiens]
Length = 443
Score = 39.7 bits (91), Expect = 0.001
Identities = 42/151 (27%), Positives = 49/151 (32%), Gaps = 25/151 (16%)
Query: 2 GSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPV 61
G SR +R P+ P PG A G R P PG P P+PV
Sbjct: 211 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGP------PGPPGPPGPPGPPAPV 264
Query: 62 APPDGR--DETLRLLDELLAESAAWGPPEPA--PRRPARLRPTAVAGSAVCAEQSTEGHP 117
PP R LL E+ P P P P + P G P
Sbjct: 265 GPPHARISQHGDPLLSNTFTETNNHWPQGPTGPPGPPGPMGP--------------PGPP 310
Query: 118 GSGNVSEAPGS-GRKKPERPAAISYDHSEEG 147
G V +PG G P P IS E+G
Sbjct: 311 GPTGVPGSPGHIGPPGPTGPKGISGHPGEKG 341
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 39.3 bits (90), Expect = 0.001
Identities = 40/115 (34%), Positives = 44/115 (38%), Gaps = 32/115 (27%)
Query: 15 RRSPESLPAGPGAAALEG----------GTRRRVPVAAAEVPGAAAEEAPGRDPSPVAP- 63
+RSP G G + EG G R R VAA E +A APGR PSP P
Sbjct: 119 QRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPE----SAAAAPGRSPSPADPG 174
Query: 64 --------PDGRDETLRLLDELLAESAAWGPPE---------PAPRRPARLRPTA 101
P R + R L A A G P PAPR PA RP A
Sbjct: 175 STSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 39.3 bits (90), Expect = 0.001
Identities = 40/115 (34%), Positives = 44/115 (38%), Gaps = 32/115 (27%)
Query: 15 RRSPESLPAGPGAAALEG----------GTRRRVPVAAAEVPGAAAEEAPGRDPSPVAP- 63
+RSP G G + EG G R R VAA E +A APGR PSP P
Sbjct: 119 QRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPE----SAAAAPGRSPSPADPG 174
Query: 64 --------PDGRDETLRLLDELLAESAAWGPPE---------PAPRRPARLRPTA 101
P R + R L A A G P PAPR PA RP A
Sbjct: 175 STSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGA 229
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 38.9 bits (89), Expect = 0.002
Identities = 36/97 (37%), Positives = 41/97 (42%), Gaps = 17/97 (17%)
Query: 17 SPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRD----PSPVAPPDGRDETLR 72
+P A GAAA +R V A +PG+AA APGRD P P PP R
Sbjct: 88 APGRQRADEGAAAARPERQR---VWARRLPGSAAAPAPGRDALRLPPPPPPPPER----- 139
Query: 73 LLDELLAESAAWGPPEPAPRRPA---RLRPTAVAGSA 106
L A GP + AP PA R RP G A
Sbjct: 140 --PRLPPAGLAGGPADSAPPSPAPAPRSRPAPRPGHA 174
Score = 28.1 bits (61), Expect = 3.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 85 GPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNV-SEAPGSGRKKPERPAAISYDH 143
G +P P RPA RP G+ + HPGS +P +G + AA
Sbjct: 34 GLRDPPPPRPAPPRPGEEPGNRHPPPPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQR 93
Query: 144 SEEGLMAS 151
++EG A+
Sbjct: 94 ADEGAAAA 101
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 42 AAEVPGAAAEEAPG--RDPSPVAPPDG----RDETLRLLDELLAESAAWGPP------EP 89
A E P A A E PG P P A PDG R +L LDEL+ + P EP
Sbjct: 542 ATERPSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEP 601
Query: 90 AP-------RRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSGRKKPERPAA 138
A RR RP A+ +S GS APG P+A
Sbjct: 602 AADCLGPQLRRLLDSRPAGSGAPALAPPRSPPASAGSAEEPAAPGEAADASPEPSA 657
Score = 29.3 bits (64), Expect = 1.5
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 15 RRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPD 65
RR +S PAG GA AL +AE P AA EA P P A D
Sbjct: 611 RRLLDSRPAGSGAPALAPPRSPPASAGSAEEP-AAPGEAADASPEPSADED 660
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.002
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 25 PGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDP--SPVAPPDGRDETLR------LLDE 76
P A +G +P A+ PG + P P P+ PP D T R LLD
Sbjct: 777 PHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDA 836
Query: 77 LLAESAAWGPP---EPAPRRPARLRPTAVAGSAVCAE-QSTEGH 116
+ S++ PP EP P A GS++ E +S +GH
Sbjct: 837 ASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGH 880
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 48 AAAEEAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGP--PEPAPRRPARLRPTAVAGS 105
A A R PSPV R LR+L GP P PAP PAR RP
Sbjct: 27 AIASAGYSRPPSPVGRARRRGTWLRVLR---------GPRAPSPAPALPARARPPRENRK 77
Query: 106 AVCAEQSTEGHP------GSGNVSEAPGSGRKKPERP 136
++ G P +G V A G R +P RP
Sbjct: 78 RAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
Score = 28.5 bits (62), Expect = 2.5
Identities = 34/120 (28%), Positives = 42/120 (35%), Gaps = 11/120 (9%)
Query: 10 RTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDE 69
R LR R+P PA P A R+R VP AA P R P G E
Sbjct: 51 RVLRGPRAPSPAPALPARARPPRENRKRA------VPARAARGPPKR---PAGGQTGGVE 101
Query: 70 TLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSG 129
+ PP P RPA R ++ +A + G SG + GSG
Sbjct: 102 AASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGR--SGRRGDRGGSG 159
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.002
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 25 PGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDP--SPVAPPDGRDETLR------LLDE 76
P A +G +P A+ PG + P P P+ PP D T R LLD
Sbjct: 777 PHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDA 836
Query: 77 LLAESAAWGPP---EPAPRRPARLRPTAVAGSAVCAE-QSTEGH 116
+ S++ PP EP P A GS++ E +S +GH
Sbjct: 837 ASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGH 880
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 10 RTLRRRRSPESL-PAGPGAAALEGGTRRRVPVAAAE--VPGAAAEEAPGRDPSPVAPPDG 66
R RRRR P+ P GP A +G + P AA P +A E APGR+P P G
Sbjct: 421 RRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPPASPAPPG 480
Query: 67 RDETLRL---LDELLAESAAWGPPEPAP 91
++ L +D +L+ P+P P
Sbjct: 481 KEHPRDLKFSIDYILSS------PDPFP 502
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 48 AAAEEAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGP--PEPAPRRPARLRPTAVAGS 105
A A R PSPV R LR+L GP P PAP PAR RP
Sbjct: 27 AIASAGYSRPPSPVGRARRRGTWLRVLR---------GPRAPSPAPALPARARPPRENRK 77
Query: 106 AVCAEQSTEGHP------GSGNVSEAPGSGRKKPERP 136
++ G P +G V A G R +P RP
Sbjct: 78 RAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
Score = 28.5 bits (62), Expect = 2.5
Identities = 34/120 (28%), Positives = 42/120 (35%), Gaps = 11/120 (9%)
Query: 10 RTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDE 69
R LR R+P PA P A R+R VP AA P R P G E
Sbjct: 51 RVLRGPRAPSPAPALPARARPPRENRKRA------VPARAARGPPKR---PAGGQTGGVE 101
Query: 70 TLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSG 129
+ PP P RPA R ++ +A + G SG + GSG
Sbjct: 102 AASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGR--SGRRGDRGGSG 159
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 38.5 bits (88), Expect = 0.002
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 25 PGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDP--SPVAPPDGRDETLR------LLDE 76
P A +G +P A+ PG + P P P+ PP D T R LLD
Sbjct: 777 PHTQAQDGAVVSPIPTLASGAPGEPQSKVPAAPPLGPPLQPPPTPDPTCREPAHSELLDA 836
Query: 77 LLAESAAWGPP---EPAPRRPARLRPTAVAGSAVCAE-QSTEGH 116
+ S++ PP EP P A GS++ E +S +GH
Sbjct: 837 ASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGH 880
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 10 RTLRRRRSPESL-PAGPGAAALEGGTRRRVPVAAAE--VPGAAAEEAPGRDPSPVAPPDG 66
R RRRR P+ P GP A +G + P AA P +A E APGR+P P G
Sbjct: 484 RRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPPASPAPPG 543
Query: 67 RDETLRL---LDELLAESAAWGPPEPAP 91
++ L +D +L+ P+P P
Sbjct: 544 KEHPRDLKFSIDYILSS------PDPFP 565
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 17/97 (17%)
Query: 48 AAAEEAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGP--PEPAPRRPARLRPTAVAGS 105
A A R PSPV R LR+L GP P PAP PAR RP
Sbjct: 27 AIASAGYSRPPSPVGRARRRGTWLRVLR---------GPRAPSPAPALPARARPPRENRK 77
Query: 106 AVCAEQSTEGHP------GSGNVSEAPGSGRKKPERP 136
++ G P +G V A G R +P RP
Sbjct: 78 RAVPARAARGPPKRPAGGQTGGVEAASGEERSQPRRP 114
Score = 28.1 bits (61), Expect = 3.3
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 11/85 (12%)
Query: 10 RTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDE 69
R LR R+P PA P A R+R VP AA P R P G E
Sbjct: 51 RVLRGPRAPSPAPALPARARPPRENRKRA------VPARAARGPPKR---PAGGQTGGVE 101
Query: 70 TLRLLDELLAESAAWGPPEPAPRRP 94
E ++ P PAPRRP
Sbjct: 102 AAS--GEERSQPRRPRRPPPAPRRP 124
>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 387
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 10 RTLRRRRSPESL-PAGPGAAALEGGTRRRVPVAAAE--VPGAAAEEAPGRDPSPVAPPDG 66
R RRRR P+ P GP A +G + P AA P +A E APGR+P P G
Sbjct: 188 RRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGREPPASPAPPG 247
Query: 67 RDETLRL---LDELLAESAAWGPPEPAP 91
++ L +D +L+ P+P P
Sbjct: 248 KEHPRDLKFSIDYILSS------PDPFP 269
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 38.1 bits (87), Expect = 0.003
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 6 SRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPD 65
SR +R RR P P A G R P AA P A AP P AP
Sbjct: 79 SRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAP-- 136
Query: 66 GRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEA 125
R +L +W E PR P R +A A + P +G +++A
Sbjct: 137 ------RPESQLSDRPQSW---EQKPRGPGRSARSAGAAA-----------PPAGGLAQA 176
Query: 126 PGSGRKKPERPAAIS 140
+ R++P AA++
Sbjct: 177 RQARRRRPRAAAALT 191
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 38.1 bits (87), Expect = 0.003
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 6 SRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPD 65
SR +R RR P P A G R P AA P A AP P AP
Sbjct: 79 SRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAP-- 136
Query: 66 GRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEA 125
R +L +W E PR P R +A A + P +G +++A
Sbjct: 137 ------RPESQLSDRPQSW---EQKPRGPGRSARSAGAAA-----------PPAGGLAQA 176
Query: 126 PGSGRKKPERPAAIS 140
+ R++P AA++
Sbjct: 177 RQARRRRPRAAAALT 191
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 38.1 bits (87), Expect = 0.003
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 6 SRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPD 65
SR +R RR P P A G R P AA P A AP P AP
Sbjct: 79 SRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAP-- 136
Query: 66 GRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEA 125
R +L +W E PR P R +A A + P +G +++A
Sbjct: 137 ------RPESQLSDRPQSW---EQRPRGPGRSARSAGAAA-----------PPAGGLAQA 176
Query: 126 PGSGRKKPERPAAIS 140
+ R++P AA++
Sbjct: 177 RQARRRRPRAAAALT 191
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 37.7 bits (86), Expect = 0.004
Identities = 36/131 (27%), Positives = 47/131 (35%), Gaps = 15/131 (11%)
Query: 23 AGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAP----PDGRDETLRLLDELL 78
AGP AA+L V AA P A A P+ VAP P + L
Sbjct: 84 AGPSAASLRAANPLAVAPAAVRRPAATLGAA---SPAAVAPAAVCPAAASPSAASLCAAS 140
Query: 79 AESAAWGPPEPAPRRPARLRPTAVAGSAVCAEQSTE--------GHPGSGNVSEAPGSGR 130
+AA PA P + P A A +A C + E P S + AP +
Sbjct: 141 PTAAAPAAASPAAAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAVP 200
Query: 131 KKPERPAAISY 141
P A++Y
Sbjct: 201 PLAAEPTALAY 211
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 37.7 bits (86), Expect = 0.004
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 32 GGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETLRLLDELLAESAAWGPPEPAP 91
G T P A P AAA AP P+P PP A +AA PP P P
Sbjct: 105 GATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGP 164
Query: 92 RRPARLRPTAVAGSAVCAEQSTEGHPGSGNVSEAPGSGRKKPERPA 137
+P P A + + A P + AP +G ++ PA
Sbjct: 165 AQPG---PRAQRAAPLAAPPPAPAAP----PAVAPPAGPRRAPPPA 203
Score = 30.4 bits (67), Expect = 0.66
Identities = 25/89 (28%), Positives = 29/89 (32%), Gaps = 2/89 (2%)
Query: 18 PESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETLRLLDEL 77
P PA PG A P A A P A P R P P R+ L +
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVA--AREPPLPPPPQP 217
Query: 78 LAESAAWGPPEPAPRRPARLRPTAVAGSA 106
A PP P P+ P G+A
Sbjct: 218 PAPPQQQQPPPPQPQPPPEGGAVRAGGAA 246
Score = 29.3 bits (64), Expect = 1.5
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 17 SPESLPAGPGAAALEGGTRRRVPVAAAE---------VPGAAAEEAPGRDPSPVAPPDG 66
+P PA P A A G RR P A A P A ++ P P PP+G
Sbjct: 179 APPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEG 237
>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
Length = 1332
Score = 37.4 bits (85), Expect = 0.005
Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 7 RSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAA-AEVPGAAAEEAPGRDPSPVAPPD 65
R S L R +P +P P G P A+ A PG + PGR P+ P
Sbjct: 882 RFSGLLGRGAAPTLVPQQPEQVLSSGS-----PAASEARDPGVSESPPPGRQPNQKTLPP 936
Query: 66 GRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSA---VCAEQSTEGHPGSGNV 122
G D LRLL ES GP P + AR P + S + E++++ + S V
Sbjct: 937 GPDPLLRLLSTQAEESQ--GPVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQV 994
Query: 123 SEA 125
S A
Sbjct: 995 SSA 997
>gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens]
Length = 631
Score = 37.4 bits (85), Expect = 0.005
Identities = 38/123 (30%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 7 RSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAA-AEVPGAAAEEAPGRDPSPVAPPD 65
R S L R +P +P P G P A+ A PG + PGR P+ P
Sbjct: 181 RFSGLLGRGAAPTLVPQQPEQVLSSGS-----PAASEARDPGVSESPPPGRQPNQKTLPP 235
Query: 66 GRDETLRLLDELLAESAAWGPPEPAPRRPARLRPTAVAGSA---VCAEQSTEGHPGSGNV 122
G D LRLL ES GP P + AR P + S + E++++ + S V
Sbjct: 236 GPDPLLRLLSTQAEESQ--GPVLKMPSQRARSFPLTRSQSCETKLLDEKTSKLYSISSQV 293
Query: 123 SEA 125
S A
Sbjct: 294 SSA 296
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,654,735
Number of Sequences: 37866
Number of extensions: 560926
Number of successful extensions: 4563
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 681
Number of HSP's that attempted gapping in prelim test: 3681
Number of HSP's gapped (non-prelim): 1485
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.