Guide to the Human Genome
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Name: OR52E2 Sequence: fasta or formatted (325aa) NCBI GI: 52353250
Description:

olfactory receptor, family 52, subfamily E, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         21           1
 C cysteine            4.0         13           1
 D aspartate           1.5          5           1
 E glutamate           2.8          9           2
 F phenylalanine       7.1         23           2
 G glycine             4.9         16           1
 H histidine           4.3         14           1
 I isoleucine         11.1         36           2
 K lysine              3.1         10           2
 L leucine            13.5         44           3
 M methionine          3.7         12           1
 N asparagine          3.7         12           1
 P proline             4.9         16           2
 Q glutamine           2.2          7           1
 R arginine            2.8          9           1
 S serine              5.2         17           2
 T threonine           5.8         19           2
 V valine              8.0         26           3
 W tryptophan          0.6          2           1
 Y tyrosine            4.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily E, member 2... 
OR52E4                0.657   olfactory receptor, family 52, subfamily E, member 4...
OR52E8                0.627   olfactory receptor, family 52, subfamily E, member 8...
OR52E6                0.617   olfactory receptor, family 52, subfamily E, member 6...
OR52J3                0.557   olfactory receptor, family 52, subfamily J, member ...
OR52H1                0.535   olfactory receptor, family 52, subfamily H, member 1...
OR52B2                0.515   olfactory receptor, family 52, subfamily B, member 2...
OR52D1                0.504   olfactory receptor, family 52, subfamily D, member 1...
OR52R1                0.493   olfactory receptor, family 52, subfamily R, member ...
OR52N4                0.488   olfactory receptor, family 52, subfamily N, member ...
OR52N2                0.482   olfactory receptor, family 52, subfamily N, member 2...
OR52B6                0.482   olfactory receptor, family 52, subfamily B, member ...
OR52A5                0.477   olfactory receptor, family 52, subfamily A, member 5...
OR52N1                0.472   olfactory receptor, family 52, subfamily N, member 1...
OR52M1                0.458   olfactory receptor, family 52, subfamily M, member 1...
OR52K2                0.457   olfactory receptor, family 52, subfamily K, member 2...
OR52A1                0.457   olfactory receptor, family 52, subfamily A, member ...
OR52K1                0.449   olfactory receptor, family 52, subfamily K, member 1...
OR52L1                0.446   olfactory receptor, family 52, subfamily L, member ...
OR52N5                0.441   olfactory receptor, family 52, subfamily N, member 5...
OR51I2                0.439   olfactory receptor, family 51, subfamily I, member 2...
OR52B4                0.435   olfactory receptor, family 52, subfamily B, member 4...
OR51F2                0.433   olfactory receptor, family 51, subfamily F, member 2...
OR51G2                0.422   olfactory receptor, family 51, subfamily G, member 2...
OR51G1                0.422   olfactory receptor, family 51, subfamily G, member 1...
OR51L1                0.419   olfactory receptor, family 51, subfamily L, member 1...
OR51E2                0.417   olfactory receptor, family 51, subfamily E, member 2...
OR51I1                0.416   olfactory receptor, family 51, subfamily I, member 1...
OR51E1                0.409   olfactory receptor, family 51, subfamily E, member ...
OR51M1                0.409   olfactory receptor, family 51, subfamily M, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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