Search of human proteins with 7770077

Search of human proteins with 7770077

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7770077 tachykinin 1 isoform gamma precursor [Homo sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7770077 tachykinin 1 isoform gamma precursor [Homo sapiens]        234   8e-63
gi|4507341 tachykinin 1 isoform beta precursor [Homo sapiens]         224   9e-60
gi|7770079 tachykinin 1 isoform delta precursor [Homo sapiens]        187   2e-48
gi|7770075 tachykinin 1 isoform alpha precursor [Homo sapiens]        177   2e-45
gi|117938256 tachykinin 4 isoform alpha [Homo sapiens]                 39   9e-04
gi|117938264 tachykinin 4 isoform alpha-2 [Homo sapiens]               38   0.002
gi|117938258 tachykinin 4 isoform beta [Homo sapiens]                  35   0.017
gi|117938260 tachykinin 4 isoform gamma [Homo sapiens]                 29   0.70 
gi|4503273 angiotensin I converting enzyme 1 isoform 1 precursor...    28   1.2  
gi|41406057 amyloid beta A4 protein isoform c precursor [Homo sa...    27   3.5  
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa...    27   3.5  
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap...    27   3.5  
gi|209915570 amyloid beta A4 protein isoform e precursor [Homo s...    27   3.5  
gi|209915573 amyloid beta A4 protein isoform f precursor [Homo s...    27   3.5  
gi|39753957 lamina-associated polypeptide 1B [Homo sapiens]            27   3.5  
gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Ho...    27   4.6  
gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Ho...    27   4.6  
gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Ho...    27   4.6  
gi|29789403 PDZ domain containing 8 [Homo sapiens]                     26   5.9  
gi|117938262 tachykinin 4 isoform delta [Homo sapiens]                 26   7.8  
gi|119120874 formin-like 3 isoform 1 [Homo sapiens]                    26   7.8  

>gi|7770077 tachykinin 1 isoform gamma precursor [Homo sapiens]
          Length = 114

 Score =  234 bits (598), Expect = 8e-63
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60
           MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK
Sbjct: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60

Query: 61  PQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERSAMQNYERRR 114
           PQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERSAMQNYERRR
Sbjct: 61  PQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERSAMQNYERRR 114


>gi|4507341 tachykinin 1 isoform beta precursor [Homo sapiens]
          Length = 129

 Score =  224 bits (572), Expect = 9e-60
 Identities = 114/129 (88%), Positives = 114/129 (88%), Gaps = 15/129 (11%)

Query: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60
           MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK
Sbjct: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60

Query: 61  PQQFFGLMGKRDA---------------GHGQISHKRHKTDSFVGLMGKRALNSVAYERS 105
           PQQFFGLMGKRDA               GHGQISHKRHKTDSFVGLMGKRALNSVAYERS
Sbjct: 61  PQQFFGLMGKRDADSSIEKQVALLKALYGHGQISHKRHKTDSFVGLMGKRALNSVAYERS 120

Query: 106 AMQNYERRR 114
           AMQNYERRR
Sbjct: 121 AMQNYERRR 129


>gi|7770079 tachykinin 1 isoform delta precursor [Homo sapiens]
          Length = 96

 Score =  187 bits (474), Expect = 2e-48
 Identities = 95/114 (83%), Positives = 96/114 (84%), Gaps = 18/114 (15%)

Query: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60
           MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK
Sbjct: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60

Query: 61  PQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERSAMQNYERRR 114
           PQQFFGLMGKRDAGHGQISHK                  +AYERSAMQNYERRR
Sbjct: 61  PQQFFGLMGKRDAGHGQISHK------------------MAYERSAMQNYERRR 96


>gi|7770075 tachykinin 1 isoform alpha precursor [Homo sapiens]
          Length = 111

 Score =  177 bits (448), Expect = 2e-45
 Identities = 95/129 (73%), Positives = 96/129 (74%), Gaps = 33/129 (25%)

Query: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60
           MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK
Sbjct: 1   MKILVALAVFFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPK 60

Query: 61  PQQFFGLMGKRDA---------------GHGQISHKRHKTDSFVGLMGKRALNSVAYERS 105
           PQQFFGLMGKRDA               GHGQISHK                  +AYERS
Sbjct: 61  PQQFFGLMGKRDADSSIEKQVALLKALYGHGQISHK------------------MAYERS 102

Query: 106 AMQNYERRR 114
           AMQNYERRR
Sbjct: 103 AMQNYERRR 111


>gi|117938256 tachykinin 4 isoform alpha [Homo sapiens]
          Length = 113

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 42  EELPEPFEHLLQRIARRPKPQQFFGLMGKRDAGHGQISHKRHKT----DSFVGLMGKRAL 97
           EE   P   L  +  +  K  QFFGLMGKR  G   I  +R K      +F GL+GKR+L
Sbjct: 41  EEGAGPSIQLQLQEVKTGKASQFFGLMGKRVGGRPLIQPRRKKAYQLEHTFQGLLGKRSL 100

Query: 98  NSVAYERSA 106
            +   E  A
Sbjct: 101 FTEGREDEA 109


>gi|117938264 tachykinin 4 isoform alpha-2 [Homo sapiens]
          Length = 107

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 60  KPQQFFGLMGKRDAGHGQISHKRHKT----DSFVGLMGKRALNSVAYERSA 106
           K  QFFGLMGKR  G   I  +R K      +F GL+GKR+L +   E  A
Sbjct: 53  KASQFFGLMGKRVGGRPLIQPRRKKAYQLEHTFQGLLGKRSLFTEGREDEA 103


>gi|117938258 tachykinin 4 isoform beta [Homo sapiens]
          Length = 96

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 60  KPQQFFGLMGKRDAGHGQISHKRHKTDSFVGLMGKRALNSVAYERSA 106
           K  QFFGLMGKR  G  Q+ H      +F GL+GKR+L +   E  A
Sbjct: 53  KASQFFGLMGKR-VGAYQLEH------TFQGLLGKRSLFTEGREDEA 92


>gi|117938260 tachykinin 4 isoform gamma [Homo sapiens]
          Length = 87

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 60 KPQQFFGLMGKRDAGHGQISHKRHK 84
          K  QFFGLMGKR  G   I  +R K
Sbjct: 53 KASQFFGLMGKRVGGRPLIQPRRKK 77


>gi|4503273 angiotensin I converting enzyme 1 isoform 1 precursor
           [Homo sapiens]
          Length = 1306

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 10  FFLVSTQLFAEEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQRI 55
           F  +S + + ++ G  D   YW  WY+S   +++L    EHL Q++
Sbjct: 207 FTALSNEAYKQD-GFTDTGAYWRSWYNSPTFEDDL----EHLYQQL 247


>gi|41406057 amyloid beta A4 protein isoform c precursor [Homo
           sapiens]
          Length = 695

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 20  EEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQR 54
           EE  A+DD     D  D D+++EE  EP+E   +R
Sbjct: 238 EEEEADDD----EDDEDGDEVEEEAEEPYEEATER 268


>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
           sapiens]
          Length = 751

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 20  EEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQR 54
           EE  A+DD     D  D D+++EE  EP+E   +R
Sbjct: 238 EEEEADDD----EDDEDGDEVEEEAEEPYEEATER 268


>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
           sapiens]
          Length = 770

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 20  EEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQR 54
           EE  A+DD     D  D D+++EE  EP+E   +R
Sbjct: 238 EEEEADDD----EDDEDGDEVEEEAEEPYEEATER 268


>gi|209915570 amyloid beta A4 protein isoform e precursor [Homo
           sapiens]
          Length = 639

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 20  EEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQR 54
           EE  A+DD     D  D D+++EE  EP+E   +R
Sbjct: 182 EEEEADDD----EDDEDGDEVEEEAEEPYEEATER 212


>gi|209915573 amyloid beta A4 protein isoform f precursor [Homo
           sapiens]
          Length = 714

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 20  EEIGANDDLNYWSDWYDSDQIKEELPEPFEHLLQR 54
           EE  A+DD     D  D D+++EE  EP+E   +R
Sbjct: 182 EEEEADDD----EDDEDGDEVEEEAEEPYEEATER 212


>gi|39753957 lamina-associated polypeptide 1B [Homo sapiens]
          Length = 583

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 35  YDSDQIKEELPEPFEHLLQRIARRPKPQQ 63
           + SD  KEE+ E   +L  R  R+P+PQ+
Sbjct: 90  FRSDSAKEEVRESAYYLRSRQRRQPRPQE 118


>gi|83977444 5-aminolevulinate synthase 2 isoform c precursor [Homo
           sapiens]
          Length = 574

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 66  GLMGKRDAGHGQISHKRHKTDSFVGLMGK 94
           GL G R AG G+     HK D   G +GK
Sbjct: 350 GLYGSRGAGIGERDGIMHKIDIISGTLGK 378


>gi|83977440 5-aminolevulinate synthase 2 isoform b precursor [Homo
           sapiens]
          Length = 550

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 66  GLMGKRDAGHGQISHKRHKTDSFVGLMGK 94
           GL G R AG G+     HK D   G +GK
Sbjct: 326 GLYGSRGAGIGERDGIMHKIDIISGTLGK 354


>gi|83977442 5-aminolevulinate synthase 2 isoform a precursor [Homo
           sapiens]
          Length = 587

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 66  GLMGKRDAGHGQISHKRHKTDSFVGLMGK 94
           GL G R AG G+     HK D   G +GK
Sbjct: 363 GLYGSRGAGIGERDGIMHKIDIISGTLGK 391


>gi|29789403 PDZ domain containing 8 [Homo sapiens]
          Length = 1154

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 42  EELPEPFEHLLQRIARRPKPQQFFGLMGKRDAGH 75
           E+  EP  HL++ ++  PK +QF G MG  +  H
Sbjct: 810 EKEKEP--HLVEEVSVLPKEEQFVGQMGLTENKH 841


>gi|117938262 tachykinin 4 isoform delta [Homo sapiens]
          Length = 76

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 11/15 (73%), Positives = 11/15 (73%)

Query: 60 KPQQFFGLMGKRDAG 74
          K  QFFGLMGKR  G
Sbjct: 53 KASQFFGLMGKRVGG 67


>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
          Length = 1027

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 23  GANDDLNYWSDWYDSDQIKEELPEPFEHLLQRIARRPKPQQFFGLMGKRDAGHGQISHKR 82
           GA D L  WS   +  Q    L  PF + L R AR+    ++  L G+R   + ++  + 
Sbjct: 163 GAFDKLRSWSRSIEDLQPPSALSAPFTNSLARSARQ-SVLRYSTLPGRRALKNSRLVSQ- 220

Query: 83  HKTDSFVGLMGKRALNSVAY 102
            K D  V ++  RA+ +  Y
Sbjct: 221 -KDDVHVCILCLRAIMNYQY 239


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,180,480
Number of Sequences: 37866
Number of extensions: 185646
Number of successful extensions: 419
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 390
Number of HSP's gapped (non-prelim): 25
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.