Guide to the Human Genome
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Name: ALAS2 Sequence: fasta or formatted (574aa) NCBI GI: 83977444
Description:

5-aminolevulinate synthase 2 isoform c precursor

Referenced in:

Heme

Other entries for this name:
alt prot [550aa] 5-aminolevulinate synthase 2 isoform b precursor
alt prot [587aa] 5-aminolevulinate synthase 2 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         48           2
 C cysteine            2.8         16           2
 D aspartate           4.5         26           1
 E glutamate           5.1         29           2
 F phenylalanine       4.9         28           2
 G glycine             8.2         47           2
 H histidine           4.0         23           2
 I isoleucine          4.5         26           2
 K lysine              6.1         35           3
 L leucine             9.6         55           3
 M methionine          3.0         17           2
 N asparagine          3.0         17           1
 P proline             4.9         28           2
 Q glutamine           4.4         25           1
 R arginine            5.1         29           2
 S serine              7.0         40           2
 T threonine           4.2         24           2
 V valine              7.0         40           2
 W tryptophan          1.0          6           1
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5-aminolevulinate synthase 2 isoform c precursor [Ho... 
ALAS2                 0.955   5-aminolevulinate synthase 2 isoform b precursor [Ho...
ALAS2                 0.939   5-aminolevulinate synthase 2 isoform a precursor [Ho...
ALAS1                 0.577   5-aminolevulinate synthase 1 
ALAS1                 0.577   5-aminolevulinate synthase 1 
GCAT                  0.172   glycine C-acetyltransferase precursor 
SPTLC3                0.128   serine palmitoyltransferase, long chain base subuni...
SPTLC2                0.112   serine palmitoyltransferase, long chain base subunit ...
SPTLC1                0.085   serine palmitoyltransferase subunit 1 isoform a [Homo...
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.005   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
ABCC5                 0.005   ATP-binding cassette, sub-family C, member 5 isoform...
GOLGB1                0.005   golgi autoantigen, golgin subfamily b, macrogolgin ...
SPTLC1                0.004   serine palmitoyltransferase subunit 1 isoform b [Hom...
FASN                  0.004   fatty acid synthase 
EEA1                  0.004   early endosome antigen 1, 162kD 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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