Guide to the Human Genome
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Name: IFI27L2 Sequence: fasta or formatted (130aa) NCBI GI: 14042964
Description:

TLH29 protein precursor

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            20.8         27           5
 C cysteine            0.8          1           1
 D aspartate           0.8          1           1
 E glutamate           6.9          9           2
 F phenylalanine       0.8          1           1
 G glycine            12.3         16           3
 H histidine           0.8          1           1
 I isoleucine          3.1          4           1
 K lysine              4.6          6           1
 L leucine             8.5         11           2
 M methionine          3.8          5           2
 N asparagine          3.1          4           1
 P proline             6.9          9           2
 Q glutamine           1.5          2           1
 R arginine            1.5          2           1
 S serine             13.1         17           3
 T threonine           2.3          3           1
 V valine              8.5         11           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TLH29 protein precursor 
IFI27L1               0.434   interferon, alpha-inducible protein 27-like 1 
IFI27L1               0.434   interferon, alpha-inducible protein 27-like 1 
IFI27                 0.403   interferon, alpha-inducible protein 27 isoform 1 [H...
IFI27                 0.367   interferon, alpha-inducible protein 27 isoform 2 [Ho...
IFI6                  0.271   interferon, alpha-inducible protein 6 isoform c [Hom...
IFI6                  0.271   interferon, alpha-inducible protein 6 isoform b [Hom...
IFI6                  0.271   interferon, alpha-inducible protein 6 isoform a [Hom...
DACH1                 0.054   dachshund homolog 1 isoform b 
DACH1                 0.054   dachshund homolog 1 isoform a 
DACH1                 0.054   dachshund homolog 1 isoform c 
ELN                   0.050   elastin isoform e precursor 
ELN                   0.050   elastin isoform a precursor 
CD3EAP                0.041   CD3E antigen, epsilon polypeptide associated protein ...
UBAP2                 0.041   ubiquitin associated protein 2 
CACNG8                0.041   voltage-dependent calcium channel gamma-8 subunit [H...
SRRM2                 0.041   splicing coactivator subunit SRm300 
RNF112                0.036   ring finger protein 112 
CHD7                  0.032   chromodomain helicase DNA binding protein 7 
HECA                  0.032   headcase 
ZNF358                0.032   zinc finger protein 358 
LOC100133142          0.032   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.032   PREDICTED: similar to zinc finger protein 208 [Homo...
PCLO                  0.032   piccolo isoform 2 
PCLO                  0.032   piccolo isoform 1 
HOXD13                0.032   homeobox D13 
MRVI1                 0.032   JAW1-related protein isoform a 
MRVI1                 0.032   JAW1-related protein isoform b 
MRVI1                 0.032   JAW1-related protein isoform b 
SOX1                  0.027   SRY (sex determining region Y)-box 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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