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Search of human proteins with 14042925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14042925 ring finger protein 26 [Homo sapiens]
(433 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14042925 ring finger protein 26 [Homo sapiens] 856 0.0
gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens] 55 9e-08
gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens] 55 9e-08
gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens] 55 9e-08
gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens] 55 9e-08
gi|53729363 leucine rich repeat and sterile alpha motif containi... 54 3e-07
gi|53729361 leucine rich repeat and sterile alpha motif containi... 54 3e-07
gi|53729359 leucine rich repeat and sterile alpha motif containi... 54 3e-07
gi|5729765 cell growth regulator with ring finger domain 1 [Homo... 54 4e-07
gi|58743365 ring finger protein 157 [Homo sapiens] 52 8e-07
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 50 3e-06
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 49 7e-06
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 49 7e-06
gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo sap... 49 7e-06
gi|223278368 neuralized-like [Homo sapiens] 45 1e-04
gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens] 45 2e-04
gi|11545910 livin inhibitor of apoptosis isoform beta [Homo sapi... 44 2e-04
gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1 ... 44 3e-04
gi|217416388 neuralized homolog 1B [Homo sapiens] 44 4e-04
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 43 6e-04
gi|30348954 mindbomb homolog 1 [Homo sapiens] 42 0.001
gi|122937239 zinc finger CCCH-type domain containing 5 [Homo sap... 42 0.001
gi|21361493 ring finger protein 141 [Homo sapiens] 42 0.001
gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens] 40 0.005
gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens] 40 0.005
gi|62865649 rififylin [Homo sapiens] 39 0.009
gi|17432433 rififylin [Homo sapiens] 39 0.009
gi|38788243 myosin regulatory light chain interacting protein [H... 39 0.009
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 38 0.016
gi|21071052 helicase-like transcription factor [Homo sapiens] 37 0.027
>gi|14042925 ring finger protein 26 [Homo sapiens]
Length = 433
Score = 856 bits (2212), Expect = 0.0
Identities = 433/433 (100%), Positives = 433/433 (100%)
Query: 1 MEAVYLVVNGLGLVLDVLTLVLDLNFLLVSSLLASLAWLLAFVYNLPHTVLTSLLHLGRG 60
MEAVYLVVNGLGLVLDVLTLVLDLNFLLVSSLLASLAWLLAFVYNLPHTVLTSLLHLGRG
Sbjct: 1 MEAVYLVVNGLGLVLDVLTLVLDLNFLLVSSLLASLAWLLAFVYNLPHTVLTSLLHLGRG 60
Query: 61 VLLSLLALIEAVVRFTCGGLQALCTLLYSCCSGLESLKLLGHLASHGALRSREILHRGVL 120
VLLSLLALIEAVVRFTCGGLQALCTLLYSCCSGLESLKLLGHLASHGALRSREILHRGVL
Sbjct: 61 VLLSLLALIEAVVRFTCGGLQALCTLLYSCCSGLESLKLLGHLASHGALRSREILHRGVL 120
Query: 121 NVVSSGHALLRQACDICAIAMSLVAYVINSLVNICLIGTQNLFSLVLALWDAVTGPLWRM 180
NVVSSGHALLRQACDICAIAMSLVAYVINSLVNICLIGTQNLFSLVLALWDAVTGPLWRM
Sbjct: 121 NVVSSGHALLRQACDICAIAMSLVAYVINSLVNICLIGTQNLFSLVLALWDAVTGPLWRM 180
Query: 181 TDVVAAFLAHISSSAVAMAILLWTPCQLALELLASAARLLASFVLVNLTGLVLLACVLAV 240
TDVVAAFLAHISSSAVAMAILLWTPCQLALELLASAARLLASFVLVNLTGLVLLACVLAV
Sbjct: 181 TDVVAAFLAHISSSAVAMAILLWTPCQLALELLASAARLLASFVLVNLTGLVLLACVLAV 240
Query: 241 TVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMRLSRLALGSEAWRRVWSRSLQLASW 300
TVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMRLSRLALGSEAWRRVWSRSLQLASW
Sbjct: 241 TVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMRLSRLALGSEAWRRVWSRSLQLASW 300
Query: 301 PNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPVRGRERLNEEE 360
PNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPVRGRERLNEEE
Sbjct: 301 PNRGGAPGAPQGDPMRVFSVRTRRQDTLPEAGRRSEAEEEEARTIRVTPVRGRERLNEEE 360
Query: 361 PPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPL 420
PPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPL
Sbjct: 361 PPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPL 420
Query: 421 CRRGILQTLNVYL 433
CRRGILQTLNVYL
Sbjct: 421 CRRGILQTLNVYL 433
>gi|214010238 mahogunin, ring finger 1 isoform 4 [Homo sapiens]
Length = 531
Score = 55.5 bits (132), Expect = 9e-08
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
+ G E N +E D + + +CV+C + L+LPCRHLCLC +C + L
Sbjct: 254 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 308
Query: 410 RHPVYHRNCPLCR---RGILQ 427
NCP+CR R +LQ
Sbjct: 309 YQA---NNCPICRLPFRALLQ 326
>gi|214010236 mahogunin, ring finger 1 isoform 3 [Homo sapiens]
Length = 552
Score = 55.5 bits (132), Expect = 9e-08
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
+ G E N +E D + + +CV+C + L+LPCRHLCLC +C + L
Sbjct: 253 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 307
Query: 410 RHPVYHRNCPLCR---RGILQ 427
NCP+CR R +LQ
Sbjct: 308 YQA---NNCPICRLPFRALLQ 325
>gi|214010234 mahogunin, ring finger 1 isoform 2 [Homo sapiens]
Length = 555
Score = 55.5 bits (132), Expect = 9e-08
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
+ G E N +E D + + +CV+C + L+LPCRHLCLC +C + L
Sbjct: 254 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 308
Query: 410 RHPVYHRNCPLCR---RGILQ 427
NCP+CR R +LQ
Sbjct: 309 YQA---NNCPICRLPFRALLQ 326
>gi|44917608 mahogunin, ring finger 1 isoform 1 [Homo sapiens]
Length = 576
Score = 55.5 bits (132), Expect = 9e-08
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 350 VRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILM 409
+ G E N +E D + + +CV+C + L+LPCRHLCLC +C + L
Sbjct: 253 IYGIENKNNQETKPSDD-----ENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLR 307
Query: 410 RHPVYHRNCPLCR---RGILQ 427
NCP+CR R +LQ
Sbjct: 308 YQA---NNCPICRLPFRALLQ 325
>gi|53729363 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 359 EEPPGGQDPWKLLKEQE-ERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN 417
+EPP P E E + +CV+C ++ ++ L C H+C CQ C + L R
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL-------RT 705
Query: 418 CPLCRRGILQTLNVY 432
CPLCR+ I Q L +Y
Sbjct: 706 CPLCRQDIAQRLRIY 720
>gi|53729361 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 359 EEPPGGQDPWKLLKEQE-ERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN 417
+EPP P E E + +CV+C ++ ++ L C H+C CQ C + L R
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL-------RT 705
Query: 418 CPLCRRGILQTLNVY 432
CPLCR+ I Q L +Y
Sbjct: 706 CPLCRQDIAQRLRIY 720
>gi|53729359 leucine rich repeat and sterile alpha motif containing
1 [Homo sapiens]
Length = 723
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 359 EEPPGGQDPWKLLKEQE-ERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN 417
+EPP P E E + +CV+C ++ ++ L C H+C CQ C + L R
Sbjct: 653 QEPPESVRPSAPPAELEVQASECVVCLEREAQMIFLNCGHVCCCQQCCQPL-------RT 705
Query: 418 CPLCRRGILQTLNVY 432
CPLCR+ I Q L +Y
Sbjct: 706 CPLCRQDIAQRLRIY 720
>gi|5729765 cell growth regulator with ring finger domain 1 [Homo
sapiens]
Length = 332
Score = 53.5 bits (127), Expect = 4e-07
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 374 QEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQT 428
+E K CV+CQ+ + +LLPCRH CLC C + Y + CP+CR+ + ++
Sbjct: 268 EENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-------YFQQCPMCRQFVQES 315
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 52.4 bits (124), Expect = 8e-07
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCR---RGILQ 427
+CV+C + L+LPCRHLCLC C + L NCP+CR R +LQ
Sbjct: 276 ECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQA---NNCPICRLPFRALLQ 324
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 50.4 bits (119), Expect = 3e-06
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L+ +E + C +C D+ +V+ +PC HL +CQ C L R CP+CR I T+
Sbjct: 562 LRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL-------RKCPICRGIIKGTVR 614
Query: 431 VYL 433
+L
Sbjct: 615 TFL 617
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 49.3 bits (116), Expect = 7e-06
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L+ +E + C +C D+ +++ +PC HL +C+ C L R CP+CR I T+
Sbjct: 548 LRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSL-------RKCPICRSTIKGTVR 600
Query: 431 VYL 433
+L
Sbjct: 601 TFL 603
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 49.3 bits (116), Expect = 7e-06
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L+ +E + C +C D+ +++ +PC HL +C+ C L R CP+CR I T+
Sbjct: 548 LRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSL-------RKCPICRSTIKGTVR 600
Query: 431 VYL 433
+L
Sbjct: 601 TFL 603
>gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo
sapiens]
Length = 298
Score = 49.3 bits (116), Expect = 7e-06
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 334 RSEAEEEEARTIR-VTPVRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLL 392
R E + E A+ V+P + EPPG +D L+ +E + C +C D++ +++
Sbjct: 205 RREVQSESAQEPGGVSPAEAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVF 264
Query: 393 LPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVYL 433
+PC HL +C C L + CP+CR + + +L
Sbjct: 265 VPCGHL-VCAECAPGL-------QLCPICRAPVRSRVRTFL 297
>gi|223278368 neuralized-like [Homo sapiens]
Length = 574
Score = 45.4 bits (106), Expect = 1e-04
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
+C IC + + ++ C H+CLC AC L H CP+CRR I + Y
Sbjct: 520 ECTICYEHAVDTVIYTCGHMCLCYACG--LRLKKALHACCPICRRPIKDIIKTY 571
>gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens]
Length = 236
Score = 44.7 bits (104), Expect = 2e-04
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 367 PWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
P + L+ +E K C IC D+ V+ +PC HL C+ C E + R CP+C
Sbjct: 176 PEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDR-------CPMC 223
>gi|11545910 livin inhibitor of apoptosis isoform beta [Homo
sapiens]
Length = 280
Score = 44.3 bits (103), Expect = 2e-04
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 349 PVRGRERLNEE-EPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEI 407
P RE +E + PG +D L+ +E + C +C D++ +++ +PC HL +C C
Sbjct: 202 PTPRREVQSESAQEPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHL-VCAECAPG 260
Query: 408 LMRHPVYHRNCPLCRRGILQTLNVYL 433
L + CP+CR + + +L
Sbjct: 261 L-------QLCPICRAPVRSRVRTFL 279
>gi|171542821 mitochondrial ubiquitin ligase activator of NFKB 1
[Homo sapiens]
Length = 352
Score = 43.9 bits (102), Expect = 3e-04
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 24/110 (21%)
Query: 323 RRQDTLPEAGRRSEAEEEEARTIRVTPVRGRERLNEEEPPGGQDPWKLLKEQEERKKCVI 382
+RQ+ L + E +E EA+ + RE L + CV+
Sbjct: 265 QRQERLRLKQMQEEFQEHEAQLLSRAKPEDRESL--------------------KSACVV 304
Query: 383 CQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
C K+ + L C H+C C C L + CP+CR+ I + + +Y
Sbjct: 305 CLSSFKSCVFLECGHVCSCTECYRALPE----PKKCPICRQAITRVIPLY 350
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 43.5 bits (101), Expect = 4e-04
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
+C +C D ++ C H+CLC +C L R CP+CRR I + +Y
Sbjct: 502 ECTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQA--RACCPICRRPIKDVIKIY 553
>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
sapiens]
Length = 497
Score = 42.7 bits (99), Expect = 6e-04
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
L+ +E K C IC D++ ++ +PC HL C+ C E + + CP+C
Sbjct: 441 LRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDK-------CPMC 484
>gi|30348954 mindbomb homolog 1 [Homo sapiens]
Length = 1006
Score = 42.0 bits (97), Expect = 0.001
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 370 LLKEQEERK----KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCR 422
+ KEQ + + +CV+C D+ VL PC H+C C+ C ++ + C CR
Sbjct: 852 ICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLM-------KKCVQCR 901
Score = 38.1 bits (87), Expect = 0.016
Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 363 GGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCR 422
G + P + + E ++C++C D + L PC H+ C C+ + + C +C+
Sbjct: 802 GSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRV-------KKCLICK 854
Query: 423 RGI 425
+
Sbjct: 855 EQV 857
Score = 35.0 bits (79), Expect = 0.13
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 332 GRRSEAEEEEARTIRVTPVRGRERLNEEEPPGGQDPWKLLKEQEERKKCVICQDQSKTVL 391
G+ SE ++ + + PV +++ N Q + L++ +E+ C +C D+ K ++
Sbjct: 916 GKSSEDATDDISSGNI-PVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMI 974
Query: 392 LLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
L C H CQ C + + CP+CR+ I + + +Y
Sbjct: 975 FL-CGH-GTCQLCGDRMSE-------CPICRKAIERRILLY 1006
>gi|122937239 zinc finger CCCH-type domain containing 5 [Homo
sapiens]
Length = 886
Score = 42.0 bits (97), Expect = 0.001
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Query: 379 KCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTL 429
KC+ CQ+Q + VL PC+H LC+ C E CP+C+ G TL
Sbjct: 844 KCLKCQEQKRAVL--PCQHAALCELCAE--------GSECPICQPGRAHTL 884
>gi|21361493 ring finger protein 141 [Homo sapiens]
Length = 230
Score = 42.0 bits (97), Expect = 0.001
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCR 422
+K+ + ++C IC D + L+LPC H CQ C + + HRNCP+CR
Sbjct: 146 VKQLTDEEECCICMD-GRADLILPCAH-SFCQKCID---KWSDRHRNCPICR 192
>gi|37595539 ring finger protein 34 isoform 1 [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.005
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L+++E+ C IC D +LL C H+ C C + + CP+CR+ +++ ++
Sbjct: 317 LQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM-------SECPICRQYVVRAVH 369
Query: 431 VY 432
V+
Sbjct: 370 VF 371
>gi|37595537 ring finger protein 34 isoform 2 [Homo sapiens]
Length = 372
Score = 39.7 bits (91), Expect = 0.005
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L+++E+ C IC D +LL C H+ C C + + CP+CR+ +++ ++
Sbjct: 316 LQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRM-------SECPICRQYVVRAVH 368
Query: 431 VY 432
V+
Sbjct: 369 VF 370
>gi|62865649 rififylin [Homo sapiens]
Length = 363
Score = 38.9 bits (89), Expect = 0.009
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 359 EEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNC 418
E+ GG P L E C IC D +LL C H+ C C + + C
Sbjct: 300 EDQNGGAVPSGL-----EENLCKICMDSPIDCVLLECGHMVTCTKCGKRM-------NEC 347
Query: 419 PLCRRGILQTLNVY 432
P+CR+ +++ ++V+
Sbjct: 348 PICRQYVIRAVHVF 361
>gi|17432433 rififylin [Homo sapiens]
Length = 363
Score = 38.9 bits (89), Expect = 0.009
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 359 EEPPGGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNC 418
E+ GG P L E C IC D +LL C H+ C C + + C
Sbjct: 300 EDQNGGAVPSGL-----EENLCKICMDSPIDCVLLECGHMVTCTKCGKRM-------NEC 347
Query: 419 PLCRRGILQTLNVY 432
P+CR+ +++ ++V+
Sbjct: 348 PICRQYVIRAVHVF 361
>gi|38788243 myosin regulatory light chain interacting protein [Homo
sapiens]
Length = 445
Score = 38.9 bits (89), Expect = 0.009
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 371 LKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLN 430
L++ +E C++C ++ PC H C++C L ++CP+CR + +
Sbjct: 378 LRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQL-------QSCPVCRSRVEHVQH 430
Query: 431 VYL 433
VYL
Sbjct: 431 VYL 433
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 38.1 bits (87), Expect = 0.016
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 373 EQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNVY 432
E + CVIC + L+PC H C C + +CP+C+ + Q + ++
Sbjct: 601 ESRRKHDCVICFENEVIAALVPCGHNLFCMECANKICEKRT--PSCPVCQTAVTQAIQIH 658
>gi|21071052 helicase-like transcription factor [Homo sapiens]
Length = 1009
Score = 37.4 bits (85), Expect = 0.027
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 369 KLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGI 425
KL+ ++C IC D ++ C H+ C+ C ++++ H CPLCR I
Sbjct: 749 KLILSSGSDEECAICLDSLTVPVITHCAHV-FCKPCICQVIQNEQPHAKCPLCRNDI 804
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,089,919
Number of Sequences: 37866
Number of extensions: 724545
Number of successful extensions: 3794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 3671
Number of HSP's gapped (non-prelim): 216
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.