Guide to the Human Genome
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Search of human proteins with 7662454

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7662454 vasohibin 1 [Homo sapiens]
         (365 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7662454 vasohibin 1 [Homo sapiens]                                 743   0.0  
gi|210147525 vasohibin 2 isoform 2 [Homo sapiens]                     334   6e-92
gi|210147527 vasohibin 2 isoform 3 [Homo sapiens]                     298   7e-81
gi|31982921 vasohibin 2 isoform 1 [Homo sapiens]                      270   1e-72
gi|63053524 ubiquitin specific protease 1 [Homo sapiens]               37   0.021
gi|63053522 ubiquitin specific protease 1 [Homo sapiens]               37   0.021
gi|31543910 ubiquitin specific protease 1 [Homo sapiens]               37   0.021
gi|74027251 tripartite motif-containing 33 protein isoform beta ...    36   0.047
gi|74027249 tripartite motif-containing 33 protein isoform alpha...    36   0.047
gi|11560152 zinc finger protein 335 [Homo sapiens]                     33   0.40 
gi|26051273 voltage-gated potassium channel, subfamily H, member...    33   0.53 
gi|4557729 voltage-gated potassium channel, subfamily H, member ...    33   0.53 
gi|238231392 dedicator of cytokinesis 8 [Homo sapiens]                 32   0.90 
gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like i...    32   0.90 
gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like i...    32   0.90 
gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]           32   1.2  
gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]           32   1.2  
gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]           32   1.2  
gi|52630440 FK506-binding protein 8 [Homo sapiens]                     32   1.2  
gi|33563376 TBC1 domain family, member 16 [Homo sapiens]               32   1.2  
gi|91208420 bassoon protein [Homo sapiens]                             31   1.5  
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]    31   1.5  
gi|13540600 nudE nuclear distribution gene E homolog (A. nidulan...    31   1.5  
gi|71284108 nudE nuclear distribution gene E homolog (A. nidulan...    31   1.5  
gi|38569484 kinesin family member 21A [Homo sapiens]                   31   1.5  
gi|194097411 transmembrane protein 119 [Homo sapiens]                  31   1.5  
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H...    31   1.5  
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...    31   1.5  
gi|14249158 hepatoma-derived growth factor-related protein 2 iso...    31   1.5  
gi|21735415 centromere protein B [Homo sapiens]                        31   2.0  

>gi|7662454 vasohibin 1 [Homo sapiens]
          Length = 365

 Score =  743 bits (1919), Expect = 0.0
 Identities = 365/365 (100%), Positives = 365/365 (100%)

Query: 1   MPGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVPF 60
           MPGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVPF
Sbjct: 1   MPGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVPF 60

Query: 61  FVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSVPTFQPSTPVPE 120
           FVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSVPTFQPSTPVPE
Sbjct: 61  FVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSVPTFQPSTPVPE 120

Query: 121 RLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGIYLT 180
           RLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGIYLT
Sbjct: 121 RLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGIYLT 180

Query: 181 NSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYKPPAFRTLSELV 240
           NSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYKPPAFRTLSELV
Sbjct: 181 NSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYKPPAFRTLSELV 240

Query: 241 LDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARD 300
           LDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARD
Sbjct: 241 LDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARD 300

Query: 301 MRLKIGKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNG 360
           MRLKIGKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNG
Sbjct: 301 MRLKIGKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNG 360

Query: 361 YQIRV 365
           YQIRV
Sbjct: 361 YQIRV 365


>gi|210147525 vasohibin 2 isoform 2 [Homo sapiens]
          Length = 290

 Score =  334 bits (857), Expect = 6e-92
 Identities = 168/291 (57%), Positives = 217/291 (74%), Gaps = 3/291 (1%)

Query: 77  MWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSVPTFQPSTPVPERLEAVQRYIRELQYNH 136
           MW HVAK+HP G ++   IR A  L K  IP VP ++ S  +P+ L+A+Q Y++ LQYNH
Sbjct: 1   MWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQVPNYRLSMTIPDWLQAIQNYMKTLQYNH 60

Query: 137 TGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGIYLTNSMPTLERFPISFKTY 196
           TGTQFFEI+K RPL+GLM+ AKEMT+E+LPIKCLEAVILGIYLTN  P++ERFPISFKTY
Sbjct: 61  TGTQFFEIRKMRPLSGLMETAKEMTRESLPIKCLEAVILGIYLTNGQPSIERFPISFKTY 120

Query: 197 FSGNYFRHIVLGVNFAGRYGALGMSRREDLMYKPPAFRTLSELVLDFEAAYGRCWHVLKK 256
           FSGNYF H+VLG+   GRYG+LGMSRR +LM KP  FRTLS+L+ DFE +Y +  H +KK
Sbjct: 121 FSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLSDLIFDFEDSYKKYLHTVKK 180

Query: 257 VKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARDMRLKIGKGTGPPSPTK 316
           VK+G  V H+PHS + IEWK  VL+V ++ R D RKELE++ARDMR+KI K     SPT+
Sbjct: 181 VKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKYARDMRMKILKPASAHSPTQ 240

Query: 317 DRKKDVS-SPQRAQSSPHRRNSRSERRPS-GDKKTSEPKAMPDLNGYQIRV 365
            R +  S SP+R Q+SP RR  R E+ P+  +KK ++   + ++ GYQIR+
Sbjct: 241 VRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTLNEV-GYQIRI 290


>gi|210147527 vasohibin 2 isoform 3 [Homo sapiens]
          Length = 251

 Score =  298 bits (762), Expect = 7e-81
 Identities = 149/250 (59%), Positives = 193/250 (77%), Gaps = 3/250 (1%)

Query: 118 VPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKCLEAVILGI 177
           +P+ L+A+Q Y++ LQYNHTGTQFFEI+K RPL+GLM+ AKEMT+E+LPIKCLEAVILGI
Sbjct: 3   IPDWLQAIQNYMKTLQYNHTGTQFFEIRKMRPLSGLMETAKEMTRESLPIKCLEAVILGI 62

Query: 178 YLTNSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYKPPAFRTLS 237
           YLTN  P++ERFPISFKTYFSGNYF H+VLG+   GRYG+LGMSRR +LM KP  FRTLS
Sbjct: 63  YLTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDKPLTFRTLS 122

Query: 238 ELVLDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERH 297
           +L+ DFE +Y +  H +KKVK+G  V H+PHS + IEWK  VL+V ++ R D RKELE++
Sbjct: 123 DLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRADIRKELEKY 182

Query: 298 ARDMRLKIGKGTGPPSPTKDRKKDVS-SPQRAQSSPHRRNSRSERRPS-GDKKTSEPKAM 355
           ARDMR+KI K     SPT+ R +  S SP+R Q+SP RR  R E+ P+  +KK ++   +
Sbjct: 183 ARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEKKVADLSTL 242

Query: 356 PDLNGYQIRV 365
            ++ GYQIR+
Sbjct: 243 NEV-GYQIRI 251


>gi|31982921 vasohibin 2 isoform 1 [Homo sapiens]
          Length = 311

 Score =  270 bits (691), Expect = 1e-72
 Identities = 146/318 (45%), Positives = 194/318 (61%), Gaps = 47/318 (14%)

Query: 50  EEDLRDGGVPFFVNRGGLPVDEATWERMWKHVAKIHPDGEKVAQRIRGATDLPKIPIPSV 109
           EE+ +DGGV F VN+ G P+D  TWERMW HVAK+HP G ++   IR A  L K  IP V
Sbjct: 39  EEEDKDGGVLFHVNKSGFPIDSHTWERMWMHVAKVHPKGGEMVGAIRNAAFLAKPSIPQV 98

Query: 110 PTFQPSTPVPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTGLMDLAKEMTKEALPIKC 169
           P ++ S  +P+ L+A+Q Y++ L Y                                   
Sbjct: 99  PNYRLSMTIPDWLQAIQNYMKTLHY----------------------------------- 123

Query: 170 LEAVILGIYLTNSMPTLERFPISFKTYFSGNYFRHIVLGVNFAGRYGALGMSRREDLMYK 229
                    LTN  P++ERFPISFKTYFSGNYF H+VLG+   GRYG+LGMSRR +LM K
Sbjct: 124 ---------LTNGQPSIERFPISFKTYFSGNYFHHVVLGIYCNGRYGSLGMSRRAELMDK 174

Query: 230 PPAFRTLSELVLDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDD 289
           P  FRTLS+L+ DFE +Y +  H +KKVK+G  V H+PHS + IEWK  VL+V ++ R D
Sbjct: 175 PLTFRTLSDLIFDFEDSYKKYLHTVKKVKIGLYVPHEPHSFQPIEWKQLVLNVSKMLRAD 234

Query: 290 FRKELERHARDMRLKIGKGTGPPSPTKDRKKDVS-SPQRAQSSPHRRNSRSERRPS-GDK 347
            RKELE++ARDMR+KI K     SPT+ R +  S SP+R Q+SP RR  R E+ P+  +K
Sbjct: 235 IRKELEKYARDMRMKILKPASAHSPTQVRSRGKSLSPRRRQASPPRRLGRREKSPALPEK 294

Query: 348 KTSEPKAMPDLNGYQIRV 365
           K ++   + ++ GYQIR+
Sbjct: 295 KVADLSTLNEV-GYQIRI 311


>gi|63053524 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 253 VLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARDMRLKIGKGTGPP 312
           +LKK ++ ++V+  P  VE+I      ++    G +    +  RH+ D + K+ KG G  
Sbjct: 217 LLKKEEV-KNVAELPTKVEEIPHPKEEMN----GINSIEMDSMRHSEDFKEKLPKGNGKR 271

Query: 313 SPTKD----RKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMP 356
               +    +KK   S +      ++R +RS+R+ + D   S PK +P
Sbjct: 272 KSDTEFGNMKKKVKLSKEHQSLEENQRQTRSKRKATSDTLESPPKIIP 319


>gi|63053522 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 253 VLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARDMRLKIGKGTGPP 312
           +LKK ++ ++V+  P  VE+I      ++    G +    +  RH+ D + K+ KG G  
Sbjct: 217 LLKKEEV-KNVAELPTKVEEIPHPKEEMN----GINSIEMDSMRHSEDFKEKLPKGNGKR 271

Query: 313 SPTKD----RKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMP 356
               +    +KK   S +      ++R +RS+R+ + D   S PK +P
Sbjct: 272 KSDTEFGNMKKKVKLSKEHQSLEENQRQTRSKRKATSDTLESPPKIIP 319


>gi|31543910 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 253 VLKKVKLGQSVSHDPHSVEQIEWKHSVLDVERLGRDDFRKELERHARDMRLKIGKGTGPP 312
           +LKK ++ ++V+  P  VE+I      ++    G +    +  RH+ D + K+ KG G  
Sbjct: 217 LLKKEEV-KNVAELPTKVEEIPHPKEEMN----GINSIEMDSMRHSEDFKEKLPKGNGKR 271

Query: 313 SPTKD----RKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMP 356
               +    +KK   S +      ++R +RS+R+ + D   S PK +P
Sbjct: 272 KSDTEFGNMKKKVKLSKEHQSLEENQRQTRSKRKATSDTLESPPKIIP 319


>gi|74027251 tripartite motif-containing 33 protein isoform beta
          [Homo sapiens]
          Length = 1110

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 3  GGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGG 57
          GG+  +GGG SG+ P +A A  P+     E     +A   EE EEEG     +GG
Sbjct: 7  GGEAESGGGGSGSAPVTAGAAGPAA---QEAEPPLTAVLVEEEEEEGGRAGAEGG 58


>gi|74027249 tripartite motif-containing 33 protein isoform alpha
          [Homo sapiens]
          Length = 1127

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 3  GGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGG 57
          GG+  +GGG SG+ P +A A  P+     E     +A   EE EEEG     +GG
Sbjct: 7  GGEAESGGGGSGSAPVTAGAAGPAA---QEAEPPLTAVLVEEEEEEGGRAGAEGG 58


>gi|11560152 zinc finger protein 335 [Homo sapiens]
          Length = 1342

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 17  PTSAAATAPSGVRRLET-SEGTSAQRDEEPEEEGEEDLRDGG 57
           P +AAA A     RL   S  T +Q +E PEEE ++D+ D G
Sbjct: 271 PVAAAAAAAGKKGRLRKWSTSTKSQEEEGPEEEDDDDIVDAG 312


>gi|26051273 voltage-gated potassium channel, subfamily H, member 2
           isoform c [Homo sapiens]
          Length = 819

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 42/154 (27%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 2   PGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVPFF 61
           PG     G G +GA P+S     P G      S G S+    E E  G        VPF 
Sbjct: 562 PGEVSALGPGRAGAGPSSRGR--PGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVPFS 619

Query: 62  VNR--GGLPVDEATWERMWKHVAKIHPDGEKVA-----------QRIRGATDLPKIPIP- 107
             R  G  P  E   E   K     +P     +            R R   +LP+ P P 
Sbjct: 620 SPRPPGEPPGGEPLMEDCEKSSDTCNPLSGAFSGVSNIFSFWGDSRGRQYQELPRCPAPT 679

Query: 108 --------SVPTFQPSTPVPERLEAVQRYIRELQ 133
                   S P  +P   V  RL+A+QR +  L+
Sbjct: 680 PSLLNIPLSSPGRRPRGDVESRLDALQRQLNRLE 713


>gi|4557729 voltage-gated potassium channel, subfamily H, member 2
            isoform a [Homo sapiens]
          Length = 1159

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 42/154 (27%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 2    PGGKKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVPFF 61
            PG     G G +GA P+S     P G      S G S+    E E  G        VPF 
Sbjct: 902  PGEVSALGPGRAGAGPSSRGR--PGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVPFS 959

Query: 62   VNR--GGLPVDEATWERMWKHVAKIHPDGEKVA-----------QRIRGATDLPKIPIP- 107
              R  G  P  E   E   K     +P     +            R R   +LP+ P P 
Sbjct: 960  SPRPPGEPPGGEPLMEDCEKSSDTCNPLSGAFSGVSNIFSFWGDSRGRQYQELPRCPAPT 1019

Query: 108  --------SVPTFQPSTPVPERLEAVQRYIRELQ 133
                    S P  +P   V  RL+A+QR +  L+
Sbjct: 1020 PSLLNIPLSSPGRRPRGDVESRLDALQRQLNRLE 1053


>gi|238231392 dedicator of cytokinesis 8 [Homo sapiens]
          Length = 2099

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 11/103 (10%)

Query: 152  GLMDLAKEMTKEALPIKCLEAVILGIYLTNSMPTLERFPISFKTY--FSGNYFRHIVLGV 209
            GL +   E+ K  +PI         + LT+S        I  K +    G YFR     V
Sbjct: 1743 GLYETVNEVYKLVIPILEAHREFRKLTLTHSKLQRAFDSIVNKDHKRMFGTYFR-----V 1797

Query: 210  NFAG-RYGALGMSRREDLMYKPPAFRTLSELVLDFEAAYGRCW 251
             F G ++G L     ++ +YK PA   L E+    EA YG+C+
Sbjct: 1798 GFFGSKFGDLD---EQEFVYKEPAITKLPEISHRLEAFYGQCF 1837


>gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like
          isoform b [Homo sapiens]
          Length = 275

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 9  GGGSSGATPTSAAATAPSGVRRLETSE----GTSAQRDEEPEEEGEEDL 53
          G G+ GA+PT +A ++P G   LE  E      S Q D   E E E++L
Sbjct: 17 GPGNDGASPTQSAPSSPDGSSDLEIDELETPSDSEQLDSGHEFEWEDEL 65


>gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like
           isoform a [Homo sapiens]
          Length = 357

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)

Query: 9   GGGSSGATPTSAAATAPSGVRRLETSE----GTSAQRDEEPEEEGEEDL 53
           G G+ GA+PT +A ++P G   LE  E      S Q D   E E E++L
Sbjct: 99  GPGNDGASPTQSAPSSPDGSSDLEIDELETPSDSEQLDSGHEFEWEDEL 147


>gi|169162318 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 193

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 306 GKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNGYQI 363
           GK  G P   K + KD          P RR++R   +PS  K   +PK  P   G ++
Sbjct: 39  GKAEGDPKGDKAKVKD---------EPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKV 87


>gi|169161838 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 306 GKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNGYQI 363
           GK  G P   K + KD          P RR++R   +PS  K   +PK  P   G ++
Sbjct: 22  GKAEGDPKGDKAKVKD---------EPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKV 70


>gi|169162671 PREDICTED: similar to hCG2040565 [Homo sapiens]
          Length = 176

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 306 GKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNGYQI 363
           GK  G P   K + KD          P RR++R   +PS  K   +PK  P   G ++
Sbjct: 22  GKAEGDPKGDKAKVKD---------EPQRRSARLSAKPSSPKPEPKPKKAPAKKGEKV 70


>gi|52630440 FK506-binding protein 8 [Homo sapiens]
          Length = 413

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 12 SSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRD----GGVPFFVNRGGL 67
          +S A P+  +A  P+GV  LE  E      D E EEE EE+  +      +P   + G  
Sbjct: 2  ASCAEPSEPSAPLPAGVPPLEDFEVLDGVEDAEGEEEEEEEEEEEDDLSELPPLEDMGQP 61

Query: 68 PVDEA 72
          P +EA
Sbjct: 62 PAEEA 66


>gi|33563376 TBC1 domain family, member 16 [Homo sapiens]
          Length = 767

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/48 (35%), Positives = 23/48 (47%)

Query: 5   KKVAGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEED 52
           K   G G  GA P S  A +PSG+    + +  + +  E   E GEED
Sbjct: 163 KLAQGLGVDGAQPASQPACSPSGILSTVSPQDVTEEGREPRPEAGEED 210


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 16/93 (17%)

Query: 286  GRDDFRKELERHARDM-----RLKIGKGTGPPSPTKDR-----KKDVSSPQRAQSSPH-- 333
            G +  R+  + HARD+     R      + P  P K +       + S P RA S+ H  
Sbjct: 3659 GEEPGRRAAKPHARDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAEYSQPSRASSAYHHA 3718

Query: 334  ---RRNSRSERR-PSGDKKTSEPKAMPDLNGYQ 362
               ++ SR     P+  +  +EP+A P L G Q
Sbjct: 3719 SDSKKGSRQAHSGPAALQSKAEPQAQPQLQGRQ 3751


>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
          Length = 1759

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 4    GKKVAGGGSSGATPTSAAATAP-SGVRRLETSEGTSAQRDEE-----PEEEGEED 52
            G  +A G +    P  AAA  P  G      + G S+Q DEE     PEEE E+D
Sbjct: 1638 GLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELELPEEEAEDD 1692


>gi|13540600 nudE nuclear distribution gene E homolog (A.
           nidulans)-like 1 isoform B [Homo sapiens]
          Length = 345

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 258 KLGQSVSHDPHSVEQIEWKHSVL-DVERLGRD--DFRKELERHARDMRLKIGKGTGPPSP 314
           +L Q++  +     +++ K S+L  V+RL  +  D R+EL    R+ + ++ + + P SP
Sbjct: 142 RLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELA--VRERQQEVTRKSAPSSP 199

Query: 315 TKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNGY 361
           T D +K  S+ Q + S P     +       +     PKA+P  NG+
Sbjct: 200 TLDCEKMDSAVQASLSLPATPVGKGT-----ENTFPSPKAIP--NGF 239


>gi|71284108 nudE nuclear distribution gene E homolog (A.
           nidulans)-like 1 isoform A [Homo sapiens]
          Length = 328

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 258 KLGQSVSHDPHSVEQIEWKHSVL-DVERLGRD--DFRKELERHARDMRLKIGKGTGPPSP 314
           +L Q++  +     +++ K S+L  V+RL  +  D R+EL    R+ + ++ + + P SP
Sbjct: 142 RLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELA--VRERQQEVTRKSAPSSP 199

Query: 315 TKDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKKTSEPKAMPDLNGY 361
           T D +K  S+ Q + S P     +       +     PKA+P  NG+
Sbjct: 200 TLDCEKMDSAVQASLSLPATPVGKGT-----ENTFPSPKAIP--NGF 239


>gi|38569484 kinesin family member 21A [Homo sapiens]
          Length = 1661

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 7/60 (11%)

Query: 5   KKVAGGGSSGATPTSAAATAPSGVRR-------LETSEGTSAQRDEEPEEEGEEDLRDGG 57
           KK +  G    T T        GV         +E S+  S   DEE EEE EED  DGG
Sbjct: 555 KKKSVAGKEDNTDTDQEKKEEKGVSERENNELEVEESQEVSDHEDEEEEEEEEEDDIDGG 614


>gi|194097411 transmembrane protein 119 [Homo sapiens]
          Length = 283

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 16  TPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGGVP 59
           +PT AA     G R +E   G  A+ +E+  +EG+++++  GVP
Sbjct: 185 SPTRAALGGGDGARMVE---GRGAEEEEKGSQEGDQEVQGHGVP 225


>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2
          [Homo sapiens]
          Length = 747

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 8  AGGGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDL 53
          AGGG  GA P  A    P  V       G   + DEE EEE EE L
Sbjct: 46 AGGG--GAGPGGACKAEPRPVAASGGGPGGDEEEDEEEEEEDEEAL 89


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 9/52 (17%)

Query: 306 GKGTGPPSPT---------KDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKK 348
           G+G GPPS +         ++ KK    PQ + + P R+  + E+R   ++K
Sbjct: 388 GRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEK 439


>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 9/52 (17%)

Query: 306 GKGTGPPSPT---------KDRKKDVSSPQRAQSSPHRRNSRSERRPSGDKK 348
           G+G GPPS +         ++ KK    PQ + + P R+  + E+R   ++K
Sbjct: 388 GRGRGPPSSSDSEPEAELEREAKKSAKKPQSSSTEPARKPGQKEKRVRPEEK 439


>gi|21735415 centromere protein B [Homo sapiens]
          Length = 599

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/48 (35%), Positives = 22/48 (45%)

Query: 10  GGSSGATPTSAAATAPSGVRRLETSEGTSAQRDEEPEEEGEEDLRDGG 57
           GG   AT T++  +        E  E       EE EEEGEE+  +GG
Sbjct: 390 GGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGG 437


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,901,996
Number of Sequences: 37866
Number of extensions: 824271
Number of successful extensions: 6382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 6144
Number of HSP's gapped (non-prelim): 272
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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