Guide to the Human Genome
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Name: INTS2 Sequence: fasta or formatted (1204aa) NCBI GI: 24308211
Description:

integrator complex subunit 2

Referenced in:

Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         81           2
 C cysteine            2.7         33           2
 D aspartate           3.7         45           2
 E glutamate           6.6         80           3
 F phenylalanine       3.1         37           3
 G glycine             4.2         51           3
 H histidine           2.2         26           1
 I isoleucine          6.1         74           2
 K lysine              3.9         47           2
 L leucine            14.5        174           3
 M methionine          3.2         38           1
 N asparagine          3.9         47           2
 P proline             4.8         58           2
 Q glutamine           6.0         72           2
 R arginine            4.7         57           3
 S serine              8.1         97           3
 T threonine           5.3         64           2
 V valine              7.4         89           2
 W tryptophan          0.9         11           1
 Y tyrosine            1.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 2 
KIAA1632              0.006   hypothetical protein LOC57724 
C1orf103              0.006   receptor-interacting factor 1 isoform 1 
INTS7                 0.004   integrator complex subunit 7 
SEPT14                0.003   septin 14 
C6orf182              0.003   hypothetical protein LOC285753 
C6orf182              0.003   hypothetical protein LOC285753 
CMIP                  0.003   c-Maf-inducing protein isoform C-mip 
CMIP                  0.003   c-Maf-inducing protein isoform Tc-mip 
NECAB3                0.003   N-terminal EF-hand calcium binding protein 3 isofor...
NECAB3                0.003   N-terminal EF-hand calcium binding protein 3 isofor...
TRMT2A                0.003   HpaII tiny fragments locus 9C 
TRMT2A                0.003   HpaII tiny fragments locus 9C 
NRG2                  0.003   neuregulin 2 isoform 2 
NRG2                  0.003   neuregulin 2 isoform 4 
NRG2                  0.003   neuregulin 2 isoform 3 
NRG2                  0.003   neuregulin 2 isoform 1 
SHPRH                 0.003   SNF2 histone linker PHD RING helicase isoform a [Ho...
SHPRH                 0.003   SNF2 histone linker PHD RING helicase isoform b [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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