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Search of human proteins with 7657603
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657603 heme binding protein 2 [Homo sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657603 heme binding protein 2 [Homo sapiens] 418 e-117
gi|20336761 heme binding protein 1 [Homo sapiens] 88 6e-18
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 32 0.29
gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting ... 32 0.49
gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens] 30 1.1
gi|5902072 serine (or cysteine) proteinase inhibitor, clade B (o... 30 1.9
gi|4504649 interleukin 15 receptor, alpha isoform 1 precursor [H... 29 2.4
gi|26787982 interleukin 15 receptor, alpha isoform 2 [Homo sapiens] 29 2.4
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ... 29 2.4
gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo sa... 29 2.4
gi|34996489 pleckstrin homology domain interacting protein [Homo... 29 2.4
gi|93352554 GPR158-like 1 [Homo sapiens] 29 2.4
gi|28076869 serine (or cysteine) proteinase inhibitor, clade B (... 29 3.2
gi|157649073 adenylyl cyclase-associated protein [Homo sapiens] 28 4.2
gi|5453595 adenylyl cyclase-associated protein [Homo sapiens] 28 4.2
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 28 4.2
gi|66267730 WD repeat domain 34 [Homo sapiens] 28 4.2
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ... 28 7.1
gi|28558973 mediator complex subunit 14 [Homo sapiens] 28 7.1
gi|46560555 transmembrane protein 132E [Homo sapiens] 28 7.1
gi|167555125 low density lipoprotein receptor-related protein 3 ... 27 9.3
gi|46593007 ubiquinol-cytochrome c reductase core protein I [Hom... 27 9.3
gi|51479192 ring finger protein 1 [Homo sapiens] 27 9.3
gi|209954788 activating transcription factor 6 beta isoform b [H... 27 9.3
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 27 9.3
gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens] 27 9.3
>gi|7657603 heme binding protein 2 [Homo sapiens]
Length = 205
Score = 418 bits (1075), Expect = e-117
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MAEPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDS 60
MAEPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDS
Sbjct: 1 MAEPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDS 60
Query: 61 AIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPP 120
AIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPP
Sbjct: 61 AIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPP 120
Query: 121 RPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYN 180
RPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYN
Sbjct: 121 RPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYN 180
Query: 181 SPVKLLNRNNEVWLIQKNEPTKENE 205
SPVKLLNRNNEVWLIQKNEPTKENE
Sbjct: 181 SPVKLLNRNNEVWLIQKNEPTKENE 205
>gi|20336761 heme binding protein 1 [Homo sapiens]
Length = 189
Score = 87.8 bits (216), Expect = 6e-18
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 10 GAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKL 69
G +++ +VET W+ + +YE R K+ + V D A++ K+
Sbjct: 3 GMIKNSLFGSVETWPWQVLSKGDKEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKV 62
Query: 70 NSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFI 129
Y G N+K + + MT P++ V P + + + IP++ Q DPP P + V I
Sbjct: 63 AKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAPSDKSVKI 122
Query: 130 EDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVYYTAGYNSPVKLLNRN 189
E+R +TV+ F G++ Q L + L E + +Y+ GY+ P+K R
Sbjct: 123 EEREGITVYSMQFGGYAKEADYVAQATRLRAAL-EGTATYRGDIYFCTGYDPPMKPYGRR 181
Query: 190 NEVWLIQ 196
NE+WL++
Sbjct: 182 NEIWLLK 188
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 32.3 bits (72), Expect = 0.29
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Query: 9 PGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTK 68
P + +A PG + P A +P E R+ P K STS+ D A Q
Sbjct: 647 PAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNPFPVKLRSTSLSLKYRDGASQE---- 702
Query: 69 LNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQ---QFDPPRPLES 125
++G ++++ +T + P + PS+Q + PP PL S
Sbjct: 703 ----VKGVKRYSAEVRLERSLTVLPKEEKCPLGTAPALRGTRAPSDQGKGKARPPEPLSS 758
>gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting
protein [Homo sapiens]
Length = 1209
Score = 31.6 bits (70), Expect = 0.49
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 5 LQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYG 44
L P PGA DA AQA TP W P + +R G
Sbjct: 1007 LTPSPGAERDAGAQADRTPPWSDFAHQSRLPSPWVLRSEG 1046
>gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens]
Length = 451
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 3 EPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGS 37
EP +P PG + Q E P + PE AG +PG+
Sbjct: 30 EPEEPGPGGGSEGPGQESEQPA-QPPEQAGGRPGA 63
>gi|5902072 serine (or cysteine) proteinase inhibitor, clade B
(ovalbumin), member 3 [Homo sapiens]
Length = 390
Score = 29.6 bits (65), Expect = 1.9
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 47 KWVSTSVESMDWDSAIQTGFTKLNSYIQGKNEKEMK 82
K+ TSVES+D+ +A + K+NS+++ + +++K
Sbjct: 125 KFYQTSVESVDFANAPEESRKKINSWVESQTNEKIK 160
>gi|4504649 interleukin 15 receptor, alpha isoform 1 precursor [Homo
sapiens]
Length = 267
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/81 (20%), Positives = 29/81 (35%)
Query: 3 EPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAI 62
EP P + AA A PG + P G+ EI + + + + +W+
Sbjct: 128 EPAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKNWELTA 187
Query: 63 QTGFTKLNSYIQGKNEKEMKI 83
Y QG ++ + I
Sbjct: 188 SASHQPPGVYPQGHSDTTVAI 208
>gi|26787982 interleukin 15 receptor, alpha isoform 2 [Homo sapiens]
Length = 231
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/81 (20%), Positives = 29/81 (35%)
Query: 3 EPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAI 62
EP P + AA A PG + P G+ EI + + + + +W+
Sbjct: 92 EPAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKNWELTA 151
Query: 63 QTGFTKLNSYIQGKNEKEMKI 83
Y QG ++ + I
Sbjct: 152 SASHQPPGVYPQGHSDTTVAI 172
>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
sapiens]
Length = 1674
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 10/48 (20%)
Query: 8 DPG-------AAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKW 48
DPG A + A+ VE PGW+A AGP+ + +I P W
Sbjct: 646 DPGRIRDKSEAGDSVEARKVEKPGWEA---AGPEAHTPDITKAEPCPW 690
>gi|4507789 ubiquitin-conjugating enzyme E2L 3 isoform 1 [Homo
sapiens]
Length = 154
Score = 29.3 bits (64), Expect = 2.4
Identities = 14/76 (18%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 93 VEPGSGPFSESTITISLYIPSEQQFDPPR-PLESDVF---IEDRAEMTVFVRSFDGFSSA 148
+ P + P+ + I + P+E F PP+ ++ ++ I+++ ++ + V S + + A
Sbjct: 39 IVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPA 98
Query: 149 QKNQEQLLTLASILRE 164
K + + +L +++ +
Sbjct: 99 TKTDQVIQSLIALVND 114
>gi|34996489 pleckstrin homology domain interacting protein [Homo
sapiens]
Length = 1821
Score = 29.3 bits (64), Expect = 2.4
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 54 ESMDWDSAIQTGFTKLN-SYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIP 112
E SA +T TK N S I GK E +K + + + PG FS T S
Sbjct: 1519 EQPSTSSAAKTFITKANASAIPGKTILENSVKHSKALNTLSSPGQSSFSHGTRNNSAKEN 1578
Query: 113 SEQQFDPPRPLESDV 127
E++ R ++S V
Sbjct: 1579 MEKEKPVKRKMKSSV 1593
>gi|93352554 GPR158-like 1 [Homo sapiens]
Length = 2367
Score = 29.3 bits (64), Expect = 2.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 10/48 (20%)
Query: 8 DPG-------AAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKW 48
DPG A + A+ VE PGW+A AGP+ + +I P W
Sbjct: 1339 DPGRIRDKSEAGDSVEARKVEKPGWEA---AGPEAHTPDITKAEPCPW 1383
>gi|28076869 serine (or cysteine) proteinase inhibitor, clade B
(ovalbumin), member 4 [Homo sapiens]
Length = 390
Score = 28.9 bits (63), Expect = 3.2
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 47 KWVSTSVESMDWDSAIQTGFTKLNSYIQGKNEKEMK 82
K+ TSVES D+ +A + K+NS+++ + +++K
Sbjct: 125 KFYQTSVESTDFANAPEESRKKINSWVESQTNEKIK 160
>gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]
Length = 475
Score = 28.5 bits (62), Expect = 4.2
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 15 AAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSV---------ESMDWDSAIQTG 65
A +++++ GW A P+PG Y A + + V + +DW A +
Sbjct: 133 AVSESIQALGWVA---MAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHVDWVKAYLSI 189
Query: 66 FTKLNSYIQGKNEKEMKIKMTAPVT-------SYVEPGSGP 99
+T+L +YI+ + + T PV S GSGP
Sbjct: 190 WTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGP 230
>gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]
Length = 475
Score = 28.5 bits (62), Expect = 4.2
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 15 AAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSV---------ESMDWDSAIQTG 65
A +++++ GW A P+PG Y A + + V + +DW A +
Sbjct: 133 AVSESIQALGWVA---MAPKPGPYVKEMNDAAMFYTNRVLKEYKDVDKKHVDWVKAYLSI 189
Query: 66 FTKLNSYIQGKNEKEMKIKMTAPVT-------SYVEPGSGP 99
+T+L +YI+ + + T PV S GSGP
Sbjct: 190 WTELQAYIKEFHTTGLAWSKTGPVAKELSGLPSGPSAGSGP 230
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 28.5 bits (62), Expect = 4.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
Query: 3 EPLQPDPGAAEDAAAQAVETPG------WKAPEDAGPQP 35
EPLQP+P + E PG + PE+ PQP
Sbjct: 800 EPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQP 838
>gi|66267730 WD repeat domain 34 [Homo sapiens]
Length = 536
Score = 28.5 bits (62), Expect = 4.2
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 1 MAEPLQPDP-GAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYG----PAKWVSTSVES 55
MA QP P A A A+ T G + G +PG + G P++W +V+
Sbjct: 1 MATRAQPGPLSQAGSAGVAALATVGVASGPGPG-RPGPLQDETLGVASVPSQW--RAVQG 57
Query: 56 MDWDS-AIQTG-FTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGS 97
+ W++ + QT ++ Q +N + +++ APV V+P S
Sbjct: 58 IRWETKSCQTASIATASASAQARNHVDAQVQTEAPVPVSVQPPS 101
>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
motif 17 [Homo sapiens]
Length = 328
Score = 27.7 bits (60), Expect = 7.1
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 5 LQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAK 47
L PD AA AA ETPG P+D P + E+ G A+
Sbjct: 214 LTPDVAAAVAAAEDGTETPG-LLPQDLPPSVLAVELEEDGRAR 255
>gi|28558973 mediator complex subunit 14 [Homo sapiens]
Length = 1454
Score = 27.7 bits (60), Expect = 7.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 4 PLQPDPGAAEDAAAQAVETPGWK 26
P P PGAA AAA A +PG++
Sbjct: 28 PAPPPPGAAVAAAAAAAASPGYR 50
>gi|46560555 transmembrane protein 132E [Homo sapiens]
Length = 984
Score = 27.7 bits (60), Expect = 7.1
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 4 PLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGS 37
P QP PG ED A+ PG P P PG+
Sbjct: 737 PSQPGPGGGED-EARGAGPPGSALPAPEAPGPGT 769
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 27.3 bits (59), Expect = 9.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 5 LQPDPGAAEDAAAQAVETPGWKAPEDAGPQ-PG-SYEIRHYGP 45
LQP PGAA D A ++T +A D P PG + E+ GP
Sbjct: 640 LQPAPGAAPDPPAPLMDTGSTRAAGDRPPSAPGRAPEVGPSGP 682
>gi|46593007 ubiquinol-cytochrome c reductase core protein I [Homo
sapiens]
Length = 480
Score = 27.3 bits (59), Expect = 9.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 17 AQAVETPGWKAPEDAGPQPGSYEIRHY 43
A AVE PGW +P++ Q + I HY
Sbjct: 288 AIAVEGPGWASPDNVALQVANAIIGHY 314
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 27.3 bits (59), Expect = 9.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 73 IQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLE 124
++G +EK+ I Y+ PG G F+ +++L + +E+ + RPLE
Sbjct: 353 LEGVSEKQYTI--------YIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLE 396
>gi|209954788 activating transcription factor 6 beta isoform b [Homo
sapiens]
Length = 700
Score = 27.3 bits (59), Expect = 9.3
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 37 SYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSY-VEP 95
S + RH+ + + + E W Q G K+ Q + +K K + PV + ++P
Sbjct: 495 SSDCRHFNRTESLRLADELSGWVQRHQRGRRKIPQRAQ-ERQKSQPRKKSPPVKAVPIQP 553
Query: 96 GSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSF 142
P +S + LY + D +P D DR E T +V SF
Sbjct: 554 PGPPERDSVGQLQLY----RHPDRSQPAFLDAI--DRREDTFYVVSF 594
>gi|20631977 activating transcription factor 6 beta isoform a [Homo
sapiens]
Length = 703
Score = 27.3 bits (59), Expect = 9.3
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 37 SYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSY-VEP 95
S + RH+ + + + E W Q G K+ Q + +K K + PV + ++P
Sbjct: 498 SSDCRHFNRTESLRLADELSGWVQRHQRGRRKIPQRAQ-ERQKSQPRKKSPPVKAVPIQP 556
Query: 96 GSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSF 142
P +S + LY + D +P D DR E T +V SF
Sbjct: 557 PGPPERDSVGQLQLY----RHPDRSQPAFLDAI--DRREDTFYVVSF 597
>gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens]
Length = 364
Score = 27.3 bits (59), Expect = 9.3
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 3 EPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWD 59
E +P+ G +D + + K P+D QPG ++ HY A + ++E D D
Sbjct: 212 ESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPG-FQQSHYFVALYRFKALEKDDLD 267
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,290,669
Number of Sequences: 37866
Number of extensions: 441340
Number of successful extensions: 1197
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1184
Number of HSP's gapped (non-prelim): 28
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.