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Search of human proteins with 7657196
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657196 zinc finger protein 330 [Homo sapiens]
(320 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657196 zinc finger protein 330 [Homo sapiens] 695 0.0
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 45 1e-04
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 39 0.005
gi|21361639 DIPB protein [Homo sapiens] 39 0.006
gi|11560152 zinc finger protein 335 [Homo sapiens] 39 0.006
gi|51477718 TATA box binding protein-associated factor, RNA poly... 39 0.008
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 39 0.008
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 38 0.010
gi|31563521 zinc finger protein 343 [Homo sapiens] 38 0.010
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 38 0.010
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 38 0.014
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 38 0.014
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 38 0.014
gi|226958478 zinc finger protein 727 [Homo sapiens] 37 0.018
gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo... 37 0.018
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 37 0.018
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 37 0.018
gi|17975763 myelin transcription factor 1 [Homo sapiens] 37 0.018
gi|83716019 zinc finger protein 284 [Homo sapiens] 37 0.018
gi|18093112 ABT1-associated protein [Homo sapiens] 37 0.018
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 37 0.023
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 37 0.023
gi|4504425 high-mobility group box 1 [Homo sapiens] 37 0.031
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 37 0.031
gi|215422388 death-domain associated protein isoform a [Homo sap... 37 0.031
gi|215422366 death-domain associated protein isoform b [Homo sap... 37 0.031
gi|110349775 zinc finger protein 12 isoform b [Homo sapiens] 37 0.031
gi|66348108 zinc finger protein 12 isoform a [Homo sapiens] 37 0.031
gi|55741655 anoctamin 8 [Homo sapiens] 36 0.040
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 36 0.040
>gi|7657196 zinc finger protein 330 [Homo sapiens]
Length = 320
Score = 695 bits (1793), Expect = 0.0
Identities = 320/320 (100%), Positives = 320/320 (100%)
Query: 1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS
Sbjct: 1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTG 240
LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTG
Sbjct: 181 LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTG 240
Query: 241 GEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFT 300
GEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFT
Sbjct: 241 GEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFT 300
Query: 301 NLNLGRTYASGYAHYEEQEN 320
NLNLGRTYASGYAHYEEQEN
Sbjct: 301 NLNLGRTYASGYAHYEEQEN 320
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 44.7 bits (104), Expect = 1e-04
Identities = 57/221 (25%), Positives = 80/221 (36%), Gaps = 43/221 (19%)
Query: 10 KKAENRREREKQLRASRSTIDLAKHPCNASMECD-----KCQRRQKNRAFCYFCNSVQKL 64
K A+ R+ K + TI K+PC S EC KC K C +
Sbjct: 1278 KNAQGRKRHVKPTSGNAFTI--CKYPCGKSRECVAPNICKC----KPGYIGSNCQTALCD 1331
Query: 65 PICAQCGKTKCMMKS-SDCVIKHAGVYSTGLAMVGAICD--FCEAWVCHGRKCLSTHACA 121
P C GK C+ + C+ H G A CD C HG CL+ + C
Sbjct: 1332 PDCKNHGK--CIKPNICQCLPGHGG----------ATCDEEHCNPPCQHGGTCLAGNLCT 1379
Query: 122 CPL----TDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVS 177
CP E + C R ++GG+ + C C+ + S + + S
Sbjct: 1380 CPYGFVGPRCETMVCNRHC-ENGGQCLTPDICQ---CKPGWYGPTCSTALCDPVCLNGGS 1435
Query: 178 CNRLGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGH 218
CN+ ++CL C F +H Q PPC GH
Sbjct: 1436 CNK--PNTCL-CPNGFFGEHC------QNAFCHPPCKNGGH 1467
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 39.3 bits (90), Expect = 0.005
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 222 ETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDE 281
E+++LS + G E+G G+ G D S ++ + +EEE+E E E++E
Sbjct: 829 ESQELSAENHGEAKNDEKGVEDGGGSDGGD------SEEEEEEEEEQEEEEEEEEQEEEE 882
Query: 282 EEEDEGRKDSDTESSDL 298
EEE+E + + E L
Sbjct: 883 EEEEEEEEKGNEEPLSL 899
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 38.9 bits (89), Expect = 0.006
Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 19/141 (13%)
Query: 186 CLRCKACFCDDHT---RSKVFKQE-----KGKQPPCPKCGHETQETKDLSMSTRSLKFGR 237
C C C+C H R K G Q P E ++ + +
Sbjct: 33 CRECGFCYCRRHAEAHRQKFLSHHLAEYVHGSQAWTPPADGEGAGKEEAEVKVEQEREIE 92
Query: 238 QTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
GEE + + S++ +T E+E + E+E+D EEE E ++S+ E
Sbjct: 93 SEAGEESESE-------EESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEED- 144
Query: 298 LFTNLNLGRTYASGYAHYEEQ 318
N G + A G E +
Sbjct: 145 ---NQEEGESEAEGETEAESE 162
Score = 37.7 bits (86), Expect = 0.014
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 208 GKQPPCPKCGH-------ETQETKDLSMSTRSLKFGRQ--TGGEEGDGASGYDAYWK--- 255
G + C +CG E K LS G Q T +G+GA +A K
Sbjct: 28 GAEEVCRECGFCYCRRHAEAHRQKFLSHHLAEYVHGSQAWTPPADGEGAGKEEAEVKVEQ 87
Query: 256 --NLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+ S+ ++ +E E E E+E +EE EDE ++S+ +S +
Sbjct: 88 EREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
>gi|11560152 zinc finger protein 335 [Homo sapiens]
Length = 1342
Score = 38.9 bits (89), Expect = 0.006
Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 4 KKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQK 63
+K R A + R+R+K+ T L+ PC C + QK +S +K
Sbjct: 535 RKDVIRHAAVHSRDRKKR---PDPTPKLSSFPCPV---CGRVYPMQKRLTQHMKTHSTEK 588
Query: 64 LPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACP 123
+C +CGK+ K H + +A C+FCE +VC +K L H +
Sbjct: 589 PHMCDKCGKS---FKKRYTFKMHLLTHIQAVANRRFKCEFCE-FVCEDKKALLNHQLS-- 642
Query: 124 LTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQ 183
+ F CSFC +D + + A+ F C C+ +
Sbjct: 643 --------------HVSDKPFKCSFCPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTR 688
Query: 184 H 184
H
Sbjct: 689 H 689
Score = 28.5 bits (62), Expect = 8.3
Identities = 23/89 (25%), Positives = 30/89 (33%), Gaps = 9/89 (10%)
Query: 209 KQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTSYH 268
+Q C C + + L R F G G W TS
Sbjct: 243 QQFKCKMCQYRSSTKATLLRHMRERHFRPVAAAAAAAGKKGRLRKWS---------TSTK 293
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EE+ E EDD++ D G D E SD
Sbjct: 294 SQEEEGPEEEDDDDIVDAGAIDDLEEDSD 322
>gi|51477718 TATA box binding protein-associated factor, RNA
polymerase II, Q [Homo sapiens]
Length = 462
Score = 38.5 bits (88), Expect = 0.008
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 242 EEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTN 301
++G +S YD + + SD + ++E+DE E ED++E+EDE +++ + + S+ +
Sbjct: 310 KQGHTSSEYDML-REMFSDSRSNNDDDEDEDDEDEDEDEDEDEDEDKEEEEEDCSEEYLE 368
Query: 302 LNL 304
L
Sbjct: 369 RQL 371
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 38.5 bits (88), Expect = 0.008
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 238 QTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
Q G + D S D+ ++ + D+ D DEE+DE + DD + E + +SDTE S+
Sbjct: 590 QFRGTDSDIPSSKDS--EDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSE 647
Score = 35.0 bits (79), Expect = 0.089
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 258 SSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTNLNLGRTYAS 310
S D ++ + E + E E+D++++D+ DSDTE T++ L +T +S
Sbjct: 628 SDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEK--TSMKLNKTTSS 678
Score = 33.9 bits (76), Expect = 0.20
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 261 KYGDTSYHDEEEDEYEAEDDEEEED-EGRKDSDTESSDLFTNLNLGRTYAS 310
K GD+ Y D+++D+ + + DE++ED E ++D + +D+ + + G AS
Sbjct: 1293 KGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAAS 1343
Score = 32.0 bits (71), Expect = 0.75
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 254 WKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTN 301
++ SD D EDE E +++E+EED+ +SD S+ +N
Sbjct: 591 FRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSN 638
Score = 32.0 bits (71), Expect = 0.75
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 265 TSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTNLN 303
+S E+ +E E EDDEEE++E +D +++ S ++ N
Sbjct: 600 SSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSN 638
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 215 KCGHETQETKDLSMSTRSLKFG--RQTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEE 272
KC E + + L +K R+ E + + SS+ + D EE
Sbjct: 211 KCNQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEE 270
Query: 273 DEYEAEDDEEEEDEGRKDSDTESSDLFTN 301
DE E + EE ++ DS++E+ N
Sbjct: 271 DEEEEDQSIEESEDDDSDSESEAQHKSNN 299
Score = 30.8 bits (68), Expect = 1.7
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 197 HTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKN 256
H + +Q +G P +KD S + + EE D D
Sbjct: 582 HPAKSLVEQFRGTDSDIPS-------SKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSE 634
Query: 257 LSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDS 291
S+ DT +EE+D+ + +D+ + + EG K S
Sbjct: 635 SDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKTS 669
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 38.1 bits (87), Expect = 0.010
Identities = 62/231 (26%), Positives = 86/231 (37%), Gaps = 55/231 (23%)
Query: 115 LSTHACACPL----TDAECVECERGVWD---------HGGR---IFSCSFCHNFLCEDDQ 158
LS H CP T C+ C D H G+ I + FC Q
Sbjct: 1499 LSCHFADCPFSGTSTHFHCLRCRFRCTDSTKVTAHRKHHGKQDVISAAGFC--------Q 1550
Query: 159 FEHQASCQVLEAE-TFKC--VSCNRLG-QHSCLRCKACFCDDHTRSKVFKQEKGK---QP 211
F A C V + + KC C G +H+ + D H R K KQE+G+ +
Sbjct: 1551 FSSSADCAVPDCKYKLKCSHFHCTFPGCRHTVVGMSQM--DSHKR-KHEKQERGEPAAEG 1607
Query: 212 PCP----------KCGHETQETKDLSMSTRSLKFGRQTGGEEG--DGASGYDAYWKNLSS 259
P P G E L + L G+ G D A+ ++
Sbjct: 1608 PAPGPPISLDGSLSLGAEPGSLLFLQSAAAGLGLALGDAGDPGPPDAAAPGPREGAAAAA 1667
Query: 260 DKYGDTSYHDEEED----EYEAEDDE-----EEEDEGRKDSDTESSDLFTN 301
G++S DEEE+ E EAEDDE E++D+ D D + DL T+
Sbjct: 1668 AAAGESSQEDEEEELELPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTD 1718
Score = 30.4 bits (67), Expect = 2.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 257 LSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTES 295
L ++ D D++ED+ + +DDE+++DE + ES
Sbjct: 1684 LPEEEAEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEES 1722
>gi|31563521 zinc finger protein 343 [Homo sapiens]
Length = 599
Score = 38.1 bits (87), Expect = 0.010
Identities = 40/176 (22%), Positives = 62/176 (35%), Gaps = 24/176 (13%)
Query: 66 ICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLT 125
IC+ CG++ K +I+H ++S V + C + + + TH+ P
Sbjct: 270 ICSDCGRS---FKDRSTLIRHHRIHSMEKPYVCSECGRGFSQKSNLSRHQRTHSEEKPYL 326
Query: 126 DAECVEC-------ERGVWDHGG-RIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVS 177
EC + R W H + + CS C E F E
Sbjct: 327 CRECGQSFRSKSILNRHQWTHSEEKPYVCSECGRGFSEKSSFIRHQRTHSGEKP------ 380
Query: 178 CNRLGQHSCLRCKACFCDDHTRSKVFKQEKGKQP-PCPKCGHETQETKDLSMSTRS 232
+ CL C FCD T K + G++P C +CG + DL R+
Sbjct: 381 ------YVCLECGRSFCDKSTLRKHQRIHSGEKPYVCRECGRGFSQNSDLIKHQRT 430
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 38.1 bits (87), Expect = 0.010
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 261 KYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
K GD + +E+ED+ EAE++EEEE+E + D ++++
Sbjct: 526 KSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNE 562
Score = 33.9 bits (76), Expect = 0.20
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 255 KNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTE 294
K S D+ D+EE E E E++EEEEDE D++ E
Sbjct: 524 KAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEE 563
Score = 30.8 bits (68), Expect = 1.7
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 25/104 (24%)
Query: 213 CPKCGHETQETKDLSMSTRSLKFGRQTGGEE-------GDGASGYDAYWK---------- 255
CP C E KD ++ RS K G+ T D A DA K
Sbjct: 198 CPDCSDEIAVKKD-NILVRSFKDGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFH 256
Query: 256 -------NLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSD 292
N ++ D+S + EE+E E +D++E+ED ++ +
Sbjct: 257 KSRTIPANWKTELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEE 300
Score = 30.4 bits (67), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 218 HETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEA 277
+E + KD + + EE SG + + D+ + +EEE+E E
Sbjct: 497 NENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDED 556
Query: 278 EDDEEEEDE 286
+DD EE+E
Sbjct: 557 DDDNNEEEE 565
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 37.7 bits (86), Expect = 0.014
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)
Query: 17 EREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCN--SVQKLPICAQCGKTK 74
E +K++R++R + N C +C + C+ S+ + C + G+ K
Sbjct: 458 ELQKEVRSARCSF-------NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQPCLREGEDK 510
Query: 75 CMMKSSDCVIKHAGVYSTGLAMVGAICDF-------CEAWVCHGR------KCL-----S 116
+C H Y G G C++ ++C+ R +C+ +
Sbjct: 511 PCSGRGECQCGHCVCYGEG-RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWT 569
Query: 117 THACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQV--------L 168
+C CPL++A C++ G+ + G C CH C C++ L
Sbjct: 570 GPSCDCPLSNATCIDSNGGICNGRGHC-ECGRCH---CHQQSLYTDTICEINYSAIHPGL 625
Query: 169 EAETFKCVSCNR--LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDL 226
+ CV C G+ C+ C + + K+ + K + +C E D
Sbjct: 626 CEDLRSCVQCQAWGTGEKKGRTCEEC----NFKVKMVDELKRAEEVVVRCSFR-DEDDDC 680
Query: 227 SMSTRSLKFGRQTGGEEGDGASG 249
+ S EGDGA G
Sbjct: 681 TYSYTM----------EGDGAPG 693
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 37.7 bits (86), Expect = 0.014
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)
Query: 17 EREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCN--SVQKLPICAQCGKTK 74
E +K++R++R + N C +C + C+ S+ + C + G+ K
Sbjct: 458 ELQKEVRSARCSF-------NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQPCLREGEDK 510
Query: 75 CMMKSSDCVIKHAGVYSTGLAMVGAICDF-------CEAWVCHGR------KCL-----S 116
+C H Y G G C++ ++C+ R +C+ +
Sbjct: 511 PCSGRGECQCGHCVCYGEG-RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWT 569
Query: 117 THACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQV--------L 168
+C CPL++A C++ G+ + G C CH C C++ L
Sbjct: 570 GPSCDCPLSNATCIDSNGGICNGRGHC-ECGRCH---CHQQSLYTDTICEINYSAIHPGL 625
Query: 169 EAETFKCVSCNR--LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDL 226
+ CV C G+ C+ C + + K+ + K + +C E D
Sbjct: 626 CEDLRSCVQCQAWGTGEKKGRTCEEC----NFKVKMVDELKRAEEVVVRCSFR-DEDDDC 680
Query: 227 SMSTRSLKFGRQTGGEEGDGASG 249
+ S EGDGA G
Sbjct: 681 TYSYTM----------EGDGAPG 693
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 37.7 bits (86), Expect = 0.014
Identities = 53/263 (20%), Positives = 94/263 (35%), Gaps = 57/263 (21%)
Query: 17 EREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCN--SVQKLPICAQCGKTK 74
E +K++R++R + N C +C + C+ S+ + C + G+ K
Sbjct: 458 ELQKEVRSARCSF-------NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQPCLREGEDK 510
Query: 75 CMMKSSDCVIKHAGVYSTGLAMVGAICDF-------CEAWVCHGR------KCL-----S 116
+C H Y G G C++ ++C+ R +C+ +
Sbjct: 511 PCSGRGECQCGHCVCYGEG-RYEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWT 569
Query: 117 THACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQV--------L 168
+C CPL++A C++ G+ + G C CH C C++ L
Sbjct: 570 GPSCDCPLSNATCIDSNGGICNGRGHC-ECGRCH---CHQQSLYTDTICEINYSAIHPGL 625
Query: 169 EAETFKCVSCNR--LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDL 226
+ CV C G+ C+ C + + K+ + K + +C E D
Sbjct: 626 CEDLRSCVQCQAWGTGEKKGRTCEEC----NFKVKMVDELKRAEEVVVRCSFR-DEDDDC 680
Query: 227 SMSTRSLKFGRQTGGEEGDGASG 249
+ S EGDGA G
Sbjct: 681 TYSYTM----------EGDGAPG 693
>gi|226958478 zinc finger protein 727 [Homo sapiens]
Length = 499
Score = 37.4 bits (85), Expect = 0.018
Identities = 60/251 (23%), Positives = 89/251 (35%), Gaps = 49/251 (19%)
Query: 4 KKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQ- 62
KK +R+K E K R S TI H + S +C++C + K + N V
Sbjct: 164 KKIFSREKCYKCEECGKDCRLSDFTIQKRIHTADRSYKCEECGKACKKFSNLTEHNRVHT 223
Query: 63 -KLPI-CAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
K P C +CGKT S + KH ++ G CE +C C
Sbjct: 224 GKKPYKCEECGKT---FTCSSALTKHKRNHT------GDRPYKCE-------ECHKAFRC 267
Query: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHN-FLCEDDQFEHQASCQVLEAE-TFKCVSC 178
LT + + G + + C CH F C D +H+ ++ E +KC C
Sbjct: 268 CSDLTKHKRIHT-------GEKPYKCKECHKAFRCCSDLTKHK---RIHTGEKPYKCNEC 317
Query: 179 NR-------LGQHS----------CLRCKACFCDDHTRSKVFKQEKGKQP-PCPKCGHET 220
+ L QH+ C C F T + +P C +CG
Sbjct: 318 GKAFMWISALSQHNRIHTGEKPYICEECGKAFTYSSTLISHKRIHMELRPYKCEECGKTF 377
Query: 221 QETKDLSMSTR 231
+ DL+ R
Sbjct: 378 KWFSDLTNHKR 388
>gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1102
Score = 37.4 bits (85), Expect = 0.018
Identities = 60/251 (23%), Positives = 89/251 (35%), Gaps = 49/251 (19%)
Query: 4 KKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNSVQ- 62
KK +R+K E K R S TI H + S +C++C + K + N V
Sbjct: 603 KKIFSREKCYKCEECGKDCRLSDFTIQKRIHTADRSYKCEECGKACKKFSNLTEHNRVHT 662
Query: 63 -KLPI-CAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
K P C +CGKT S + KH ++ G CE +C C
Sbjct: 663 GKKPYKCEECGKT---FTCSSALTKHKRNHT------GDRPYKCE-------ECHKAFRC 706
Query: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHN-FLCEDDQFEHQASCQVLEAE-TFKCVSC 178
LT + + G + + C CH F C D +H+ ++ E +KC C
Sbjct: 707 CSDLTKHKRIHT-------GEKPYKCKECHKAFRCCSDLTKHK---RIHTGEKPYKCNEC 756
Query: 179 NR-------LGQHS----------CLRCKACFCDDHTRSKVFKQEKGKQP-PCPKCGHET 220
+ L QH+ C C F T + +P C +CG
Sbjct: 757 GKAFMWISALSQHNRIHTGEKPYICEECGKAFTYSSTLISHKRIHMELRPYKCEECGKTF 816
Query: 221 QETKDLSMSTR 231
+ DL+ R
Sbjct: 817 KWFSDLTNHKR 827
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 37.4 bits (85), Expect = 0.018
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 115 LSTHACAC--PLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAET 172
++T C C + A+C EC RG W++ C+ C FL D ++ET
Sbjct: 1074 VNTGQCNCHPKFSGAKCTECSRGHWNYP----RCNLCDCFLPGTD-------ATTCDSET 1122
Query: 173 FKCVSCNRLGQHSC-LRCKACFCDDHTRSKVFKQEKGKQPPCPKC---GHETQ--ETKDL 226
KC ++ GQ +C + + C D R F + C C G TQ E K L
Sbjct: 1123 KKCSCSDQTGQCTCKVNVEGIHC-DRCRPGKFGLDAKNPLGCSSCYCFGTTTQCSEAKGL 1181
Query: 227 SMSTRSLK 234
+ +LK
Sbjct: 1182 IRTWVTLK 1189
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 37.4 bits (85), Expect = 0.018
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 20/128 (15%)
Query: 115 LSTHACAC--PLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAET 172
++T C C + A+C EC RG W++ C+ C FL D ++ET
Sbjct: 1074 VNTGQCNCHPKFSGAKCTECSRGHWNYP----RCNLCDCFLPGTD-------ATTCDSET 1122
Query: 173 FKCVSCNRLGQHSC-LRCKACFCDDHTRSKVFKQEKGKQPPCPKC---GHETQ--ETKDL 226
KC ++ GQ +C + + C D R F + C C G TQ E K L
Sbjct: 1123 KKCSCSDQTGQCTCKVNVEGIHC-DRCRPGKFGLDAKNPLGCSSCYCFGTTTQCSEAKGL 1181
Query: 227 SMSTRSLK 234
+ +LK
Sbjct: 1182 IRTWVTLK 1189
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 37.4 bits (85), Expect = 0.018
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 245 DGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
D AS + K + S + D +EEE+E E E++EEEE+E ++ + E +
Sbjct: 242 DAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE 294
Score = 33.5 bits (75), Expect = 0.26
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
DEEE+E E E++EEEE+E ++ + E +
Sbjct: 274 DEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 32.3 bits (72), Expect = 0.58
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 264 DTSYHDEEEDEYEAEDDEEEEDEGRKDSDTE 294
D +EEE+E E E++EEEE+E ++ + E
Sbjct: 274 DEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304
Score = 32.3 bits (72), Expect = 0.58
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTNLNLGRTYA 309
+EEE+E E E++EEEE+E ++ + + D+ + T A
Sbjct: 282 EEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSA 322
Score = 32.0 bits (71), Expect = 0.75
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 242 EEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
EE G ++ + ++ + ++EE+E E E++EEEE+E ++ + E +
Sbjct: 246 EESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Score = 32.0 bits (71), Expect = 0.75
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ + E +
Sbjct: 275 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 32.0 bits (71), Expect = 0.75
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ + E +
Sbjct: 276 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304
Score = 32.0 bits (71), Expect = 0.75
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ + E +
Sbjct: 277 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 32.0 bits (71), Expect = 0.75
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ + E +
Sbjct: 278 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Score = 32.0 bits (71), Expect = 0.75
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESS 296
+EEE+E E E++EEEE+E ++ + E++
Sbjct: 281 EEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Score = 31.6 bits (70), Expect = 0.98
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 260 DKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLF 299
D+ + +EEE+E E E++EEEE+E ++ + +F
Sbjct: 274 DEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIF 313
>gi|83716019 zinc finger protein 284 [Homo sapiens]
Length = 593
Score = 37.4 bits (85), Expect = 0.018
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 140 GGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSC-NRLGQHSCLRCKACFCDDHT 198
G + F C C + + E ++F+C +C N GQ S L C DHT
Sbjct: 283 GEKPFKCYICGKSFHSRSNLNRHSMVHMQE-KSFRCDTCSNSFGQRSALNSH---CMDHT 338
Query: 199 RSKVFK-QEKGKQPPCPK--CGHETQETKD 225
+ K++K +E G+ C + C H+ T D
Sbjct: 339 KEKLYKCEECGRSFTCRQDLCKHQMDHTGD 368
>gi|18093112 ABT1-associated protein [Homo sapiens]
Length = 851
Score = 37.4 bits (85), Expect = 0.018
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 207 KGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGE-------EGDGAS----GYDAYWK 255
K + C K E Q L M+ S + T GE E D S G D +
Sbjct: 197 KSPRIECSKTRREMQSVVQLIMTRDSDGYENSTDGEMCDKDALEEDSESVSEIGSDEESE 256
Query: 256 NLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSDLFTNLNLGR 306
N G S D+ ++ E ED++EEEDE D + SD +L G+
Sbjct: 257 N-EITSVGRASGDDDGSEDDEEEDEDEEEDEDEDSEDDDKSDSGPDLARGK 306
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 37.0 bits (84), Expect = 0.023
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 243 EGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESS 296
+ D S +A + LS ++ + +EEE+E E E++EE+E+ G + + SS
Sbjct: 284 DSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSS 337
Score = 34.7 bits (78), Expect = 0.12
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ D ES +
Sbjct: 301 EEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 250 YDAYWKNLSSDKYGDTSYHDEEE-------DEYEAEDDEEEEDEGRKDSDTESSDLFTNL 302
+ Y+ + S D+ D+ E E +E E E++EEEE+E ++ + E D +
Sbjct: 270 FSLYYDSYSVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
Query: 303 NLGRTYASG 311
R+ +SG
Sbjct: 330 QSDRSGSSG 338
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 37.0 bits (84), Expect = 0.023
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 243 EGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESS 296
+ D S +A + LS ++ + +EEE+E E E++EE+E+ G + + SS
Sbjct: 284 DSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGNQSDRSGSS 337
Score = 34.7 bits (78), Expect = 0.12
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEE+E E E++EEEE+E ++ D ES +
Sbjct: 301 EEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 250 YDAYWKNLSSDKYGDTSYHDEEE-------DEYEAEDDEEEEDEGRKDSDTESSDLFTNL 302
+ Y+ + S D+ D+ E E +E E E++EEEE+E ++ + E D +
Sbjct: 270 FSLYYDSYSVDERVDSDSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDEESGN 329
Query: 303 NLGRTYASG 311
R+ +SG
Sbjct: 330 QSDRSGSSG 338
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 36.6 bits (83), Expect = 0.031
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+EEEDE + ED+EEEEDE +D + + D
Sbjct: 186 EEEEDEEDEEDEEEEEDEEDEDEEEDDDD 214
Score = 32.3 bits (72), Expect = 0.58
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 264 DTSYHDEEEDEYEAEDDEEEEDEGRKDSDTESSD 297
+ S +EE+E E ++++EEE+E +D D E D
Sbjct: 179 EKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
Score = 32.3 bits (72), Expect = 0.58
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 259 SDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSD 292
S K + +E+E++ E E+DEE+EDE D D
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDD 214
Score = 30.8 bits (68), Expect = 1.7
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 269 DEEEDEYEAEDDEEEEDEGRKDSDTE 294
DEE++E E E+++EE+++ +D D E
Sbjct: 190 DEEDEEDEEEEEDEEDEDEEEDDDDE 215
Score = 30.0 bits (66), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 255 KNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDE 286
K ++ + DEEE+E E ++DEEE+D+
Sbjct: 182 KKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDD 213
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 242 EEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTE 294
+ G+G SG + + S +T D+EE + E E++EEEE+E DS+ E
Sbjct: 414 DSGEGPSGMAS--QGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEE 464
Score = 34.3 bits (77), Expect = 0.15
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 205 QEKGKQPPCPKCGHETQETKDLSMST--RSLKFGRQTGGEEGDGASGYDAYWKNLSSDKY 262
Q+K ++ K Q T S T SL G G G + D+
Sbjct: 383 QDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEE 442
Query: 263 GDTSYHDEEEDEY-EAEDDEEEED-----EGRKDSDTESSD 297
D +EEE+E EA D EEEED EG++D + E +
Sbjct: 443 SDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 483
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 242 EEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTE 294
+ G+G SG + + S +T D+EE + E E++EEEE+E DS+ E
Sbjct: 414 DSGEGPSGMAS--QGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEE 464
Score = 34.3 bits (77), Expect = 0.15
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 205 QEKGKQPPCPKCGHETQETKDLSMST--RSLKFGRQTGGEEGDGASGYDAYWKNLSSDKY 262
Q+K ++ K Q T S T SL G G G + D+
Sbjct: 383 QDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEE 442
Query: 263 GDTSYHDEEEDEY-EAEDDEEEED-----EGRKDSDTESSD 297
D +EEE+E EA D EEEED EG++D + E +
Sbjct: 443 SDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 483
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 36.6 bits (83), Expect = 0.031
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 242 EEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEGRKDSDTE 294
+ G+G SG + + S +T D+EE + E E++EEEE+E DS+ E
Sbjct: 426 DSGEGPSGMAS--QGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEE 476
Score = 34.3 bits (77), Expect = 0.15
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 205 QEKGKQPPCPKCGHETQETKDLSMST--RSLKFGRQTGGEEGDGASGYDAYWKNLSSDKY 262
Q+K ++ K Q T S T SL G G G + D+
Sbjct: 395 QDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEE 454
Query: 263 GDTSYHDEEEDEY-EAEDDEEEED-----EGRKDSDTESSD 297
D +EEE+E EA D EEEED EG++D + E +
Sbjct: 455 SDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEE 495
>gi|110349775 zinc finger protein 12 isoform b [Homo sapiens]
Length = 659
Score = 36.6 bits (83), Expect = 0.031
Identities = 44/186 (23%), Positives = 64/186 (34%), Gaps = 48/186 (25%)
Query: 67 CAQCGKTKCMMKSSDCVIK---HAGVYSTGLAMVGAICDFCE--AWVCHGRKCLSTHACA 121
C++CGK+ C K S +I H G G FC+ H R TH
Sbjct: 233 CSECGKSFC--KKSKFIIHQRTHTGEKPYECNQCGK--SFCQKGTLTVHQR----THTGE 284
Query: 122 CPLTDAECVECERGVWDH-----------GGRIFSCSFCHNFLCEDDQF-EHQASCQVLE 169
P EC EC + + G + + CS+C C+ +HQ +
Sbjct: 285 KPY---ECNECGKNFYQKLHLIQHQRTHSGEKPYECSYCGKSFCQKTHLTQHQRTHS--G 339
Query: 170 AETFKCVSCNR-------LGQHS----------CLRCKACFCDDHTRSKVFKQEKGKQP- 211
+ C C + L H C C CFC T + + G++P
Sbjct: 340 ERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHLRTHTGEKPY 399
Query: 212 PCPKCG 217
C +CG
Sbjct: 400 ECNECG 405
Score = 29.6 bits (65), Expect = 3.7
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 39/242 (16%)
Query: 23 RASRSTIDLAKHPCNASMECDKCQRRQKNRAFC---YFCNSVQKLPICAQCGKTKCMMKS 79
R S T L H EC++C + ++ Y +S +K C +CGKT +
Sbjct: 382 RKSTLTTHLRTHTGEKPYECNECGKFFSRLSYLTVHYRTHSGEKPYECNECGKTFYL--- 438
Query: 80 SDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDH 139
+ +++H V++ C+ C H + EC EC + + +
Sbjct: 439 NSALMRHQRVHTGEKPYE---CNECGKLFSQLSYLTIHHRTHSGVKPYECSECGKTFYQN 495
Query: 140 -----------GGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR-------L 181
G + + C C F + E + ++C C + L
Sbjct: 496 SALCRHRRIHKGEKPYECYICGKFFSQMSYLTIHHRIHSGE-KPYECSECGKTFCQNSAL 554
Query: 182 GQH----------SCLRCKACFCDDHTRSKVFKQEKGKQP-PCPKCGHETQETKDLSMST 230
+H C C CF + + G++P C +CG L++
Sbjct: 555 NRHQRTHTGEKAYECYECGKCFSQMSYLTIHHRIHSGEKPFECNECGKAFSRMSYLTVHY 614
Query: 231 RS 232
R+
Sbjct: 615 RT 616
>gi|66348108 zinc finger protein 12 isoform a [Homo sapiens]
Length = 697
Score = 36.6 bits (83), Expect = 0.031
Identities = 44/186 (23%), Positives = 64/186 (34%), Gaps = 48/186 (25%)
Query: 67 CAQCGKTKCMMKSSDCVIK---HAGVYSTGLAMVGAICDFCE--AWVCHGRKCLSTHACA 121
C++CGK+ C K S +I H G G FC+ H R TH
Sbjct: 271 CSECGKSFC--KKSKFIIHQRTHTGEKPYECNQCGK--SFCQKGTLTVHQR----THTGE 322
Query: 122 CPLTDAECVECERGVWDH-----------GGRIFSCSFCHNFLCEDDQF-EHQASCQVLE 169
P EC EC + + G + + CS+C C+ +HQ +
Sbjct: 323 KPY---ECNECGKNFYQKLHLIQHQRTHSGEKPYECSYCGKSFCQKTHLTQHQRTHS--G 377
Query: 170 AETFKCVSCNR-------LGQHS----------CLRCKACFCDDHTRSKVFKQEKGKQP- 211
+ C C + L H C C CFC T + + G++P
Sbjct: 378 ERPYVCHDCGKTFSQKSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHLRTHTGEKPY 437
Query: 212 PCPKCG 217
C +CG
Sbjct: 438 ECNECG 443
Score = 29.6 bits (65), Expect = 3.7
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 39/242 (16%)
Query: 23 RASRSTIDLAKHPCNASMECDKCQRRQKNRAFC---YFCNSVQKLPICAQCGKTKCMMKS 79
R S T L H EC++C + ++ Y +S +K C +CGKT +
Sbjct: 420 RKSTLTTHLRTHTGEKPYECNECGKFFSRLSYLTVHYRTHSGEKPYECNECGKTFYL--- 476
Query: 80 SDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDH 139
+ +++H V++ C+ C H + EC EC + + +
Sbjct: 477 NSALMRHQRVHTGEKPYE---CNECGKLFSQLSYLTIHHRTHSGVKPYECSECGKTFYQN 533
Query: 140 -----------GGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR-------L 181
G + + C C F + E + ++C C + L
Sbjct: 534 SALCRHRRIHKGEKPYECYICGKFFSQMSYLTIHHRIHSGE-KPYECSECGKTFCQNSAL 592
Query: 182 GQH----------SCLRCKACFCDDHTRSKVFKQEKGKQP-PCPKCGHETQETKDLSMST 230
+H C C CF + + G++P C +CG L++
Sbjct: 593 NRHQRTHTGEKAYECYECGKCFSQMSYLTIHHRIHSGEKPFECNECGKAFSRMSYLTVHY 652
Query: 231 RS 232
R+
Sbjct: 653 RT 654
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 36.2 bits (82), Expect = 0.040
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 12/48 (25%)
Query: 240 GGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEAEDDEEEEDEG 287
GGEEGDG G K D DEEE++ E E+DEEE +EG
Sbjct: 570 GGEEGDGPPG----GKEEDED--------DEEEEDEEEEEDEEEGEEG 605
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 36.2 bits (82), Expect = 0.040
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 218 HETQETKDLSMSTRSL-KFGRQTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYE 276
+ET+E+ +L+M TR K ++T E D G ++ S + G+ H+++ ++ +
Sbjct: 209 NETEES-NLNMYTRGKQKDIQRTDEETTDNQEG------SVESSEEGEDQEHEDDGEDED 261
Query: 277 AEDDEEEEDEGRKDSDTESSD 297
EDD++++D+ D D + D
Sbjct: 262 DEDDDDDDDDDDDDDDEDDED 282
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,323,799
Number of Sequences: 37866
Number of extensions: 767420
Number of successful extensions: 13823
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 252
Number of HSP's that attempted gapping in prelim test: 7422
Number of HSP's gapped (non-prelim): 3639
length of query: 320
length of database: 18,247,518
effective HSP length: 102
effective length of query: 218
effective length of database: 14,385,186
effective search space: 3135970548
effective search space used: 3135970548
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.