Guide to the Human Genome
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Name: EIF1B Sequence: fasta or formatted (113aa) NCBI GI: 5031711
Description:

translation factor sui1 homolog

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          6           1
 C cysteine            1.8          2           1
 D aspartate           8.0          9           2
 E glutamate           6.2          7           2
 F phenylalanine       5.3          6           1
 G glycine             8.0          9           1
 H histidine           2.7          3           1
 I isoleucine          8.0          9           1
 K lysine             10.6         12           3
 L leucine             8.0          9           2
 M methionine          0.9          1           1
 N asparagine          3.5          4           1
 P proline             2.7          3           1
 Q glutamine           8.8         10           2
 R arginine            3.5          4           1
 S serine              1.8          2           1
 T threonine           6.2          7           2
 V valine              6.2          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   translation factor sui1 homolog 
EIF1                  0.942   eukaryotic translation initiation factor 1 
LOC730144             0.830   PREDICTED: similar to eukaryotic translation initia...
LOC730144             0.830   PREDICTED: similar to eukaryotic translation initia...
LOC730144             0.830   PREDICTED: similar to eukaryotic translation initia...
ABCC2                 0.024   ATP-binding cassette, sub-family C (CFTR/MRP), member...
CNPY2                 0.010   canopy 2 homolog 
BRIP1                 0.010   BRCA1 interacting protein C-terminal helicase 1 [Hom...
KBTBD3                0.005   BTB and kelch domain containing 3 
KBTBD3                0.005   BTB and kelch domain containing 3 
CHST11                0.005   carbohydrate sulfotransferase 11 
TNXB                  0.005   tenascin XB isoform 1 precursor 
EXOC6                 0.005   SEC15-like 1 isoform a 
EXOC6                 0.005   SEC15-like 1 isoform b 
ADCK5                 0.005   aarF domain containing kinase 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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