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Search of human proteins with 75677385
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677385 neugrin [Homo sapiens]
(291 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677385 neugrin [Homo sapiens] 584 e-167
gi|239753687 PREDICTED: similar to Putative neugrin-like protein... 353 1e-97
gi|239748291 PREDICTED: similar to Putative neugrin-like protein... 266 1e-71
gi|239742191 PREDICTED: similar to Putative neugrin-like protein... 266 1e-71
gi|186928821 hepatoma-derived growth factor isoform c [Homo sapi... 35 0.10
gi|186928819 hepatoma-derived growth factor isoform b [Homo sapi... 35 0.10
gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens] 35 0.10
gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens] 35 0.10
gi|168229174 RNA binding motif protein 27 [Homo sapiens] 34 0.13
gi|145301567 hypothetical protein LOC56006 [Homo sapiens] 34 0.17
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 33 0.23
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 33 0.23
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.29
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.29
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 33 0.39
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 33 0.39
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens] 32 0.50
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens] 32 0.50
gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo sa... 32 0.50
gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo sap... 32 0.50
gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens] 32 0.66
gi|10198656 anti-Mullerian hormone receptor, type II [Homo sapiens] 32 0.66
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 0.66
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 0.66
gi|21071001 autocrine motility factor receptor [Homo sapiens] 32 0.86
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 31 1.1
gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo ... 31 1.1
gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein... 31 1.1
gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo s... 31 1.1
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 31 1.5
>gi|75677385 neugrin [Homo sapiens]
Length = 291
Score = 584 bits (1506), Expect = e-167
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MAVTLSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEVESTLKRQ 60
MAVTLSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEVESTLKRQ
Sbjct: 1 MAVTLSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEVESTLKRQ 60
Query: 61 KQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRR 120
KQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRR
Sbjct: 61 KQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRR 120
Query: 121 VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEA 180
VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEA
Sbjct: 121 VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEA 180
Query: 181 SSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSD 240
SSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSD
Sbjct: 181 SSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSD 240
Query: 241 SESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYRI 291
SESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYRI
Sbjct: 241 SESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYRI 291
>gi|239753687 PREDICTED: similar to Putative neugrin-like protein
[Homo sapiens]
Length = 258
Score = 353 bits (906), Expect = 1e-97
Identities = 200/291 (68%), Positives = 213/291 (73%), Gaps = 33/291 (11%)
Query: 1 MAVTLSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEVESTLKRQ 60
M VTLSL + G V AA+TRC F T VAGPG GREP EE ELQEVESTL RQ
Sbjct: 1 MLVTLSLXIAGXVSAAITRCTFETHWVAGPGLTGREP--------EEGELQEVESTLPRQ 52
Query: 61 KQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRR 120
K+AIRFQKIRRQMEAP +W VPRL EGFDV TDVIR
Sbjct: 53 KKAIRFQKIRRQMEAP------------------------AWLVPRLMEGFDVCTDVIRS 88
Query: 121 VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEA 180
LK KF+PTLEQKLK DQKVLKKAGLA+SLQ L+GSGNT KLLPAGHSVSGSLLM GHEA
Sbjct: 89 FLKGKFVPTLEQKLKPDQKVLKKAGLAYSLQQLQGSGNTWKLLPAGHSVSGSLLMLGHEA 148
Query: 181 SSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSD 240
SSK PN+ST LKVIES+T+RTNTPR KGRNK IQDLEESFV VAA LGH R+LQKYSSD
Sbjct: 149 SSKAPNYSTTLKVIESNTYRTNTPRGWKGRNKGIQDLEESFVTVAAVLGHQRKLQKYSSD 208
Query: 241 SESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNFLYRI 291
ES R TG G LPS QKLEELKA EPDN + GRE FDS+GNFLYRI
Sbjct: 209 CESIRRTGHGGLPSDQKLEELKAGEPDNQQQSSAE-GRELFDSSGNFLYRI 258
>gi|239748291 PREDICTED: similar to Putative neugrin-like protein
[Homo sapiens]
Length = 184
Score = 266 bits (681), Expect = 1e-71
Identities = 145/184 (78%), Positives = 154/184 (83%), Gaps = 2/184 (1%)
Query: 109 EGFDVSTDVIRR-VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGH 167
EGFDV TDVIRR VLK KF+PTLEQKLK DQKVLKKAGLA+SLQ L+GSGNT KLLPAGH
Sbjct: 2 EGFDVCTDVIRRRVLKGKFVPTLEQKLKPDQKVLKKAGLAYSLQQLQGSGNTWKLLPAGH 61
Query: 168 SVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAP 227
SVSGSLLM GHEASSK PN+ST LKVIES+T+RTNTPR KGRNK IQDLEESFV VAA
Sbjct: 62 SVSGSLLMLGHEASSKAPNYSTTLKVIESNTYRTNTPRGWKGRNKGIQDLEESFVTVAAV 121
Query: 228 LGHPRELQKYSSDSESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNF 287
LGH R+LQKYSSD ES R TG G LPS QKLEELKA EPDN + GRE FDS+GNF
Sbjct: 122 LGHQRKLQKYSSDCESIRRTGHGGLPSDQKLEELKAGEPDNQQQSSAE-GRELFDSSGNF 180
Query: 288 LYRI 291
LYRI
Sbjct: 181 LYRI 184
>gi|239742191 PREDICTED: similar to Putative neugrin-like protein
[Homo sapiens]
Length = 184
Score = 266 bits (681), Expect = 1e-71
Identities = 145/184 (78%), Positives = 154/184 (83%), Gaps = 2/184 (1%)
Query: 109 EGFDVSTDVIRR-VLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGH 167
EGFDV TDVIRR VLK KF+PTLEQKLK DQKVLKKAGLA+SLQ L+GSGNT KLLPAGH
Sbjct: 2 EGFDVCTDVIRRRVLKGKFVPTLEQKLKPDQKVLKKAGLAYSLQQLQGSGNTWKLLPAGH 61
Query: 168 SVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAP 227
SVSGSLLM GHEASSK PN+ST LKVIES+T+RTNTPR KGRNK IQDLEESFV VAA
Sbjct: 62 SVSGSLLMLGHEASSKAPNYSTTLKVIESNTYRTNTPRGWKGRNKGIQDLEESFVTVAAV 121
Query: 228 LGHPRELQKYSSDSESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNGNF 287
LGH R+LQKYSSD ES R TG G LPS QKLEELKA EPDN + GRE FDS+GNF
Sbjct: 122 LGHQRKLQKYSSDCESIRRTGHGGLPSDQKLEELKAGEPDNQQQSSAE-GRELFDSSGNF 180
Query: 288 LYRI 291
LYRI
Sbjct: 181 LYRI 184
>gi|186928821 hepatoma-derived growth factor isoform c [Homo
sapiens]
Length = 233
Score = 34.7 bits (78), Expect = 0.10
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 182 SKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDS 241
+K+ N ALK D + R ++ N E ++ E + + V PL P E++K S+ S
Sbjct: 138 AKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPL--PMEVEKNSTPS 195
Query: 242 ESPRGTGSGALPSGQKLEELKAEE 265
E GSG P ++ EE EE
Sbjct: 196 E----PGSGRGPPQEEEEEEDEEE 215
>gi|186928819 hepatoma-derived growth factor isoform b [Homo
sapiens]
Length = 256
Score = 34.7 bits (78), Expect = 0.10
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 182 SKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDS 241
+K+ N ALK D + R ++ N E ++ E + + V PL P E++K S+ S
Sbjct: 161 AKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPL--PMEVEKNSTPS 218
Query: 242 ESPRGTGSGALPSGQKLEELKAEE 265
E GSG P ++ EE EE
Sbjct: 219 E----PGSGRGPPQEEEEEEDEEE 238
>gi|4758516 hepatoma-derived growth factor isoform a [Homo sapiens]
Length = 240
Score = 34.7 bits (78), Expect = 0.10
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 182 SKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDS 241
+K+ N ALK D + R ++ N E ++ E + + V PL P E++K S+ S
Sbjct: 145 AKEKNEKGALKRRAGDLLEDSPKRPKEAENPEGEEKEAATLEVERPL--PMEVEKNSTPS 202
Query: 242 ESPRGTGSGALPSGQKLEELKAEE 265
E GSG P ++ EE EE
Sbjct: 203 E----PGSGRGPPQEEEEEEDEEE 222
>gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]
Length = 1606
Score = 34.7 bits (78), Expect = 0.10
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 115 TDVIRRVLKSKFL---PTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSG 171
TDV+ +K KF P +++ L + +++ H++ S + LP H VSG
Sbjct: 276 TDVLEIEVKDKFAKSRPIIKRFLGKLSMPVQRLLERHAIGDRVVSYTLGRRLPTDH-VSG 334
Query: 172 SLLMPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHP 231
L SS P+ + + + P + ++ + +L ES G P
Sbjct: 335 QLQFRFEITSSIHPD--------DEEISLSTEPESAQIQDSPMNNLMES------GSGEP 380
Query: 232 RELQKYSSDSESPRGTGSGALPSGQKLEELKAEEPDNFSSKVVQRGREFFDSNG 285
R SS+S P G G++P G + ++ P ++ + + G + S G
Sbjct: 381 RSEAPESSESWKPEQLGEGSVPDGPGNQSIELSRPAEEAAVITEAGDQGMVSVG 434
>gi|168229174 RNA binding motif protein 27 [Homo sapiens]
Length = 1060
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 195 ESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDSESPRGTGSGALPS 254
+ D +R R R E DLE S+VPV+AP P ++YSS ++S T + P+
Sbjct: 189 DRDPNRNVEHRERSKFKSERNDLESSYVPVSAP--PPNSSEQYSSGAQSIPSTVTVIAPA 246
>gi|145301567 hypothetical protein LOC56006 [Homo sapiens]
Length = 520
Score = 33.9 bits (76), Expect = 0.17
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 26 GVAGP----GPIGREPDPDSDWEPEERELQEVESTLKRQKQAIRFQKIRRQME------- 74
G GP GP GRE D + WE E R+ E ST QK I K +
Sbjct: 24 GSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPPT 83
Query: 75 APGAPP 80
AP APP
Sbjct: 84 APAAPP 89
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 214 IQDLEESFVPVAAPLGHPRELQKYSSDSESPRGT---GSGALP-SGQKLEELKAEEPDNF 269
+QD E VP A+P G P+ + ++ +E PRGT G +P +G L LK+E +
Sbjct: 2069 LQDKES--VPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPST 2126
Query: 270 SSK 272
S+K
Sbjct: 2127 STK 2129
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 214 IQDLEESFVPVAAPLGHPRELQKYSSDSESPRGT---GSGALP-SGQKLEELKAEEPDNF 269
+QD E VP A+P G P+ + ++ +E PRGT G +P +G L LK+E +
Sbjct: 2069 LQDKES--VPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPST 2126
Query: 270 SSK 272
S+K
Sbjct: 2127 STK 2129
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 33.1 bits (74), Expect = 0.29
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 47 ERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLT-------WEAMEQIRYLHEEFP 99
E E Q+ +S+ K+ K+ + +R+ E P PP L+ E + Q + E
Sbjct: 1794 EIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIEDASPTEELRQAAEMEELHR 1853
Query: 100 ESW-----SVPRLAEGFDVSTDVIRRVLK--------SKFLPTLEQKLKQ---DQKVLKK 143
S S+ EGF++S + I V K S + PT EQ + Q QK LK
Sbjct: 1854 SSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAVSLYSPTDEQSIMQKEGSQKALKS 1913
Query: 144 AGLAHSLQHLRGSGNTSKLLPAGHS---------VSGSLLMPG--HEASSKDPNHSTALK 192
A + + + K PA + + G +L+ +E+ +D + +
Sbjct: 1914 A--EEMYEEMMHKTHKYKAFPAANERDEVFEKEPLYGGMLIEDYIYESLVEDTYNGSVDG 1971
Query: 193 VIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDSES 243
+ + N ++KGR ++I+ E+ + P+ +LQK + ES
Sbjct: 1972 SLLTRQEEENGFMQQKGREQKIRLSEQIY---EDPMQKITDLQKEFYELES 2019
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 33.1 bits (74), Expect = 0.29
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 47 ERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLT-------WEAMEQIRYLHEEFP 99
E E Q+ +S+ K+ K+ + +R+ E P PP L+ E + Q + E
Sbjct: 1794 EIEQQQRKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIEDASPTEELRQAAEMEELHR 1853
Query: 100 ESW-----SVPRLAEGFDVSTDVIRRVLK--------SKFLPTLEQKLKQ---DQKVLKK 143
S S+ EGF++S + I V K S + PT EQ + Q QK LK
Sbjct: 1854 SSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAVSLYSPTDEQSIMQKEGSQKALKS 1913
Query: 144 AGLAHSLQHLRGSGNTSKLLPAGHS---------VSGSLLMPG--HEASSKDPNHSTALK 192
A + + + K PA + + G +L+ +E+ +D + +
Sbjct: 1914 A--EEMYEEMMHKTHKYKAFPAANERDEVFEKEPLYGGMLIEDYIYESLVEDTYNGSVDG 1971
Query: 193 VIESDTHRTNTPRRRKGRNKEIQDLEESFVPVAAPLGHPRELQKYSSDSES 243
+ + N ++KGR ++I+ E+ + P+ +LQK + ES
Sbjct: 1972 SLLTRQEEENGFMQQKGREQKIRLSEQIY---EDPMQKITDLQKEFYELES 2019
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 32.7 bits (73), Expect = 0.39
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 28/215 (13%)
Query: 67 QKIRRQMEAPGAPPRTLT----WE---AMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIR 119
Q R Q P AP T W A + + LH+E P LAEG VS
Sbjct: 303 QAPRTQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGA 362
Query: 120 RVLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPG-- 177
RV +++ T ++ D++ +A L + +R G ++ G V G PG
Sbjct: 363 RVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRGVCGK-CGPGPW 421
Query: 178 -HEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVA--APLGHPREL 234
A ++P + K+ R R R G ++ + P A P G R +
Sbjct: 422 DDPARRRNPGAAARAKLA---GQRAGRARARTG--SQVGSRGRGWGPGAGRVPSGGRRGV 476
Query: 235 ---QKYSSDSESPRGTGSGALPSGQKLEELKAEEP 266
+++ ++ +PR PS L EL A +P
Sbjct: 477 GNPERWGGEAAAPR-------PSRVLLPELPAVDP 504
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 32.7 bits (73), Expect = 0.39
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 28/215 (13%)
Query: 67 QKIRRQMEAPGAPPRTLT----WE---AMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIR 119
Q R Q P AP T W A + + LH+E P LAEG VS
Sbjct: 303 QAPRTQPACPAAPRMQQTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGA 362
Query: 120 RVLKSKFLPTLEQKLKQDQKVLKKAGLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPG-- 177
RV +++ T ++ D++ +A L + +R G ++ G V G PG
Sbjct: 363 RVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRGVCGK-CGPGPW 421
Query: 178 -HEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQDLEESFVPVA--APLGHPREL 234
A ++P + K+ R R R G ++ + P A P G R +
Sbjct: 422 DDPARRRNPGAAARAKLA---GQRAGRARARTG--SQVGSRGRGWGPGAGRVPSGGRRGV 476
Query: 235 ---QKYSSDSESPRGTGSGALPSGQKLEELKAEEP 266
+++ ++ +PR PS L EL A +P
Sbjct: 477 GNPERWGGEAAAPR-------PSRVLLPELPAVDP 504
>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
Length = 1090
Score = 32.3 bits (72), Expect = 0.50
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 44 EPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRT 82
E E R QE E LKRQ+Q ++ + R AP P RT
Sbjct: 954 EEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 992
>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
Length = 1103
Score = 32.3 bits (72), Expect = 0.50
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 44 EPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRT 82
E E R QE E LKRQ+Q ++ + R AP P RT
Sbjct: 954 EEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 992
>gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo
sapiens]
Length = 859
Score = 32.3 bits (72), Expect = 0.50
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 44 EPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRT 82
E E R QE E LKRQ+Q ++ + R AP P RT
Sbjct: 723 EEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 761
>gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo
sapiens]
Length = 948
Score = 32.3 bits (72), Expect = 0.50
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 44 EPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRT 82
E E R QE E LKRQ+Q ++ + R AP P RT
Sbjct: 812 EEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 850
>gi|118498359 ribosomal L1 domain containing 1 [Homo sapiens]
Length = 490
Score = 32.0 bits (71), Expect = 0.66
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 189 TALKVIESDTHRT-NTPRRRKGRNK-------EIQDLEESFVPVA--APLGHPRELQKYS 238
T +K ES +T ++++GR K E +D VP+ P E+QK++
Sbjct: 328 TTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHA 387
Query: 239 SDSESPRGTGSGALPSGQKLEELKAEE 265
+ +SP + + + P G+K + L A E
Sbjct: 388 TGKKSPAKSPNPSTPRGKKRKALPASE 414
>gi|10198656 anti-Mullerian hormone receptor, type II [Homo sapiens]
Length = 573
Score = 32.0 bits (71), Expect = 0.66
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 5 LSLLLGGRVCAAVTRCGFATRGVAGPGPIGREPDPDSDWEPEERELQEV 53
L LLLG + A + R + RG P P PD DW E +EL E+
Sbjct: 158 LLLLLGSIILALLQRKNYRVRGEPVPEP---RPDSGRDWSVELQELPEL 203
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 0.66
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 40 DSDWEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIR------Y 93
+ + E EE++L+EV +LK++ Q ++ +K R+ E G + + Y
Sbjct: 450 EKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNEARSKMDVAQSELDIY 509
Query: 94 LHEEFPESWSVPRLAEGFDVSTDVIR------RVLKSKFLPTLEQKLKQDQKVLKK 143
L + + E +++ ++ R ++ K LP EQ+LK+ +K L+K
Sbjct: 510 LSRHNTAVSQLTKAKEALIAASETLKERKAAIRDIEGK-LPQTEQELKEKEKELQK 564
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 0.66
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 40 DSDWEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIR------Y 93
+ + E EE++L+EV +LK++ Q ++ +K R+ E G + + Y
Sbjct: 450 EKEKEKEEKKLKEVMDSLKQETQGLQKEKESREKELMGFSKSVNEARSKMDVAQSELDIY 509
Query: 94 LHEEFPESWSVPRLAEGFDVSTDVIR------RVLKSKFLPTLEQKLKQDQKVLKK 143
L + + E +++ ++ R ++ K LP EQ+LK+ +K L+K
Sbjct: 510 LSRHNTAVSQLTKAKEALIAASETLKERKAAIRDIEGK-LPQTEQELKEKEKELQK 564
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 31.6 bits (70), Expect = 0.86
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 156 SGNTSKLLPAGHSVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTPRRRKGRNKEIQ 215
S ++ LP GH S L E + P +L + +++ R +G N
Sbjct: 347 SMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVR----EEHQGEN---- 398
Query: 216 DLEESFVPVAAPLGHPR 232
L+E+ VPVAA G PR
Sbjct: 399 -LDENLVPVAAAEGRPR 414
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 31.2 bits (69), Expect = 1.1
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 44 EPEERELQEVESTLKRQKQAI--RFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPE 100
+ +E +++E E ++RQ++ + + +K+RRQ E + WE E+IR L E+ E
Sbjct: 305 QEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEE--------MMWEKEEKIRELEEKMHE 355
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 43 WEPEERELQEVESTLKRQKQAIRFQ--KIRRQME 74
WE EE E+QE E ++RQ++ IR Q KIR Q E
Sbjct: 421 WEQEE-EMQEQEEKMRRQEEKIREQEKKIREQEE 453
Score = 28.1 bits (61), Expect = 9.5
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
Query: 43 WEPEER------ELQEVESTLKRQKQAIRFQKIR-RQME 74
WE EE+ ++QE E ++RQ++ +R Q++R RQ E
Sbjct: 526 WEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLRQQE 564
>gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo
sapiens]
Length = 575
Score = 31.2 bits (69), Expect = 1.1
Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 58/210 (27%)
Query: 36 EPDPDSDWEPEERELQEVESTLKRQKQAIR-------FQKIRRQMEAPGAPP----RTLT 84
EP+ + EPEE + E LK + + R + + ++ APG P R+L
Sbjct: 231 EPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLAPGVDPSPPCRSLG 290
Query: 85 WEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRRVLKSKFLPTLEQKLKQDQKVLKKA 144
W+ ++ EE PE P E + V + L L+ KLKQ +
Sbjct: 291 WKRKKEWSDESEEEPEKELAPEPEETWVV-----------EMLCGLKMKLKQQR------ 333
Query: 145 GLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTP 204
S +LP H S L PG + S P+ S K
Sbjct: 334 --------------VSPILPEHHKDFNSQLAPGVDPS--PPHRSFCWK------------ 365
Query: 205 RRRKGRNKEIQDLEESFVPVAAPLGHPREL 234
R+R+ ++ + LEE V AP P E+
Sbjct: 366 RKREWWDESEESLEEEPRKVLAP--EPEEI 393
>gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein 7
[Homo sapiens]
Length = 575
Score = 31.2 bits (69), Expect = 1.1
Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 58/210 (27%)
Query: 36 EPDPDSDWEPEERELQEVESTLKRQKQAIR-------FQKIRRQMEAPGAPP----RTLT 84
EP+ + EPEE + E LK + + R + + ++ APG P R+L
Sbjct: 231 EPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLAPGVDPSPPCRSLG 290
Query: 85 WEAMEQIRYLHEEFPESWSVPRLAEGFDVSTDVIRRVLKSKFLPTLEQKLKQDQKVLKKA 144
W+ ++ EE PE P E + V + L L+ KLKQ +
Sbjct: 291 WKRKKEWSDESEEEPEKELAPEPEETWVV-----------EMLCGLKMKLKQQR------ 333
Query: 145 GLAHSLQHLRGSGNTSKLLPAGHSVSGSLLMPGHEASSKDPNHSTALKVIESDTHRTNTP 204
S +LP H S L PG + S P+ S K
Sbjct: 334 --------------VSPILPEHHKDFNSQLAPGVDPS--PPHRSFCWK------------ 365
Query: 205 RRRKGRNKEIQDLEESFVPVAAPLGHPREL 234
R+R+ ++ + LEE V AP P E+
Sbjct: 366 RKREWWDESEESLEEEPRKVLAP--EPEEI 393
>gi|149408115 unkempt homolog (Drosophila)-like isoform 1 [Homo
sapiens]
Length = 232
Score = 31.2 bits (69), Expect = 1.1
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 30 PGPI-GREPDPDSDWEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAM 88
P PI P S P EL V L K+ IR Q E +W+ +
Sbjct: 48 PSPILSAGPPSSSSASPNGAELARVRRQLDEAKRKIR------QWEE--------SWQQV 93
Query: 89 EQI-RYLHEEFPESWSVPRLAEGFDVSTDVIRRVLKSKFLPTLEQKLKQDQKVLKKAGLA 147
+Q+ E E+ R+A+ R L + +E ++KQ Q+ L+ G+A
Sbjct: 94 KQVCDAWQREAQEAKERARVADS--------DRQLALQKKEEVEAQVKQLQEELEGLGVA 145
Query: 148 HSLQHLRGSGNTSKL-LPAGHSVSGSL 173
+L LRG G+ + LP HS+ L
Sbjct: 146 STLPGLRGCGDIGTIPLPKLHSLQSQL 172
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 30.8 bits (68), Expect = 1.5
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 35 REPDPDSDWEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYL 94
R+ D W EE+ ++E E + RQ++ IR Q+ +RQ + W+ E+IR
Sbjct: 565 RQEQEDKMWRQEEK-IREQEEKVWRQEEKIREQEEKRQEQ------EEKMWKQEEKIREQ 617
Query: 95 HEEFPE 100
E+ E
Sbjct: 618 EEKIQE 623
Score = 30.0 bits (66), Expect = 2.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 43 WEPEERELQEVESTLKRQKQAIRFQKIRRQMEAPGAPPRTLTWEAMEQIRYLHEEFPE 100
WE EE+ ++ E +++++ R +++ + E + WE E+IR L E+ E
Sbjct: 345 WEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHE 402
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,048,686
Number of Sequences: 37866
Number of extensions: 662122
Number of successful extensions: 2382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 2295
Number of HSP's gapped (non-prelim): 152
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.