LIG4 30182

Name: LIG4	Sequence: fasta or formatted (911aa)		NCBI GI: 46255052
Description: DNA ligase IV		Referenced in: DNases, Recombination, and DNA Repair Replication Proteins
Other entries for this name: alt mRNA [911aa] DNA ligase IV alt mRNA [911aa] DNA ligase IV
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 53 2 C cysteine 2.2 20 1 D aspartate 6.5 59 2 E glutamate 6.8 62 2 F phenylalanine 4.3 39 1 G glycine 5.5 50 2 H histidine 3.1 28 1 I isoleucine 7.4 67 2 K lysine 9.1 83 2 L leucine 8.9 81 2 M methionine 3.1 28 2 N asparagine 3.6 33 2 P proline 4.4 40 3 Q glutamine 3.6 33 2 R arginine 4.7 43 2 S serine 6.7 61 2 T threonine 4.8 44 2 V valine 5.0 46 2 W tryptophan 1.1 10 1 Y tyrosine 3.4 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DNA ligase IV LIG4 1.000 DNA ligase IV LIG4 1.000 DNA ligase IV LIG3 0.070 ligase III, DNA, ATP-dependent isoform beta precurso... LIG3 0.070 ligase III, DNA, ATP-dependent isoform alpha precurs... LIG1 0.054 DNA ligase I SMC1B 0.004 SMC1 structural maintenance of chromosomes 1-like 2 ... LOC100128069 0.004 PREDICTED: similar to alpha actin DYRK1A 0.004 dual-specificity tyrosine-(Y)-phosphorylation regula... LOC653192 0.004 PREDICTED: Tripartite motif-containing protein 43-li... TRIM43 0.004 tripartite motif-containing 43 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.