BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|72534716 coiled-coil domain containing 90A [Homo sapiens] (359 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|72534716 coiled-coil domain containing 90A [Homo sapiens] 697 0.0 gi|20149663 coiled-coil domain containing 90B [Homo sapiens] 228 6e-60 gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 42 0.001 gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 42 0.001 gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 40 0.002 gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 38 0.012 gi|55770834 centromere protein F [Homo sapiens] 38 0.016 gi|7657138 golgi integral membrane protein 4 [Homo sapiens] 37 0.021 gi|169178850 PREDICTED: similar to coiled-coil domain containing... 37 0.027 gi|31542661 transmembrane protein 57 [Homo sapiens] 37 0.027 gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 37 0.027 gi|58530842 desmoplakin isoform II [Homo sapiens] 37 0.036 gi|15431310 keratin 14 [Homo sapiens] 37 0.036 gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap... 36 0.047 gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 36 0.047 gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 36 0.047 gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 36 0.047 gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 36 0.061 gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 35 0.080 gi|215490011 small inducible cytokine subfamily E, member 1 isof... 35 0.10 gi|215490009 small inducible cytokine subfamily E, member 1 isof... 35 0.10 gi|45006986 small inducible cytokine subfamily E, member 1 isofo... 35 0.10 gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 35 0.10 gi|239749325 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10 gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 35 0.10 gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 35 0.10 gi|239509122 PREDICTED: hypothetical protein [Homo sapiens] 35 0.10 gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens] 35 0.14 gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ... 35 0.14 gi|126362971 serine/threonine kinase 10 [Homo sapiens] 35 0.14 >gi|72534716 coiled-coil domain containing 90A [Homo sapiens] Length = 359 Score = 697 bits (1800), Expect = 0.0 Identities = 359/359 (100%), Positives = 359/359 (100%) Query: 1 MDCGSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSALSDGLGALRPRAPAAR 60 MDCGSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSALSDGLGALRPRAPAAR Sbjct: 1 MDCGSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSALSDGLGALRPRAPAAR 60 Query: 61 GGVSRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCSPGVAAAA 120 GGVSRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCSPGVAAAA Sbjct: 61 GGVSRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCSPGVAAAA 120 Query: 121 GALPQYHGPAPALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGF 180 GALPQYHGPAPALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGF Sbjct: 121 GALPQYHGPAPALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGF 180 Query: 181 ATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFS 240 ATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFS Sbjct: 181 ATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFS 240 Query: 241 ALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEI 300 ALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEI Sbjct: 241 ALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEI 300 Query: 301 VALHAQQDRALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRLWI 359 VALHAQQDRALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRLWI Sbjct: 301 VALHAQQDRALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRLWI 359 >gi|20149663 coiled-coil domain containing 90B [Homo sapiens] Length = 254 Score = 228 bits (581), Expect = 6e-60 Identities = 117/229 (51%), Positives = 160/229 (69%), Gaps = 3/229 (1%) Query: 130 APALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQQAEIIV 189 +PAL RRE + +R+ D T RKL FDTHALV LE +GF QAE IV Sbjct: 28 SPAL---RREFFTTTTKEGYDRRPVDITPLEQRKLTFDTHALVQDLETHGFDKTQAETIV 84 Query: 190 SALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKI 249 SAL + ++D +YK+MVT+ QQEIT QQ+M+ + ++KDM+ILEKSEF+ LRAENEK+ Sbjct: 85 SALTALSNVSLDTIYKEMVTQAQQEITVQQLMAHLDAIRKDMVILEKSEFANLRAENEKM 144 Query: 250 KLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDR 309 K+EL Q+KQQ+M E ++R D KLD NLE+SRV ++++ EK+L+E TE Q Sbjct: 145 KIELDQVKQQLMHETSRIRADNKLDINLERSRVTDMFTDQEKQLMETTTEFTKKDTQTKS 204 Query: 310 ALTQTDRKIETEVAGLKTMLESHKLDNIKYLAGSIFTCLTVALGFYRLW 358 +++T KI+ E+A LKT++ES+KL+ I+YLA S+FTCL +ALGFYR W Sbjct: 205 IISETSNKIDAEIASLKTLMESNKLETIRYLAASVFTCLAIALGFYRFW 253 >gi|190341068 forkhead-associated (FHA) phosphopeptide binding domain 1 [Homo sapiens] Length = 1412 Score = 41.6 bits (96), Expect = 0.001 Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 22/201 (10%) Query: 125 QYHGPAPALVSCRRELSLSAGSL-QLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQ 183 Q HG ++ + ++ A ++ LE K + T + + L+DN A + Sbjct: 914 QRHGFEEEIMEYKEQIKQHAQTIVSLEEKLQKVTQHHKK-----IEGEIATLKDNDPAPK 968 Query: 184 QAEIIVSALVKILEANM-DIVYKDMVTKM---QQEITFQQVMSQIANVKKDMIILEKSEF 239 + + + E++ D+ Y+ ++ + Q+EI QQ + I ++KD+ S Sbjct: 969 EERPQDPLVAPMTESSAKDMAYEHLIDDLLAAQKEILSQQEV--IMKLRKDLTEAH-SRM 1025 Query: 240 SALRAE-NEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRT 298 S LR E NEK K+EL Q V+ V+ +K + ++ K ++ ++ SL EKK EL+ Sbjct: 1026 SDLRGELNEKQKMELEQ-------NVVLVQQQSK-ELSVLKEKMAQMSSLVEKKDRELKA 1077 Query: 299 EIVALHAQQDRALTQTDRKIE 319 AL A Q++ Q + + E Sbjct: 1078 LEEALRASQEKHRLQLNTEKE 1098 >gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo sapiens] Length = 551 Score = 41.6 bits (96), Expect = 0.001 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 41/203 (20%) Query: 148 QLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYKDM 207 +LERKRR+ G R++ + E+ +Q E +++ +E + KDM Sbjct: 245 ELERKRREERIRGRRQI---VEQMEKNQEERSLLAEQREQEKEQMLEYMEQLQEEDLKDM 301 Query: 208 VTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLEL---HQLKQQVMDEV 264 + QQ++ Q +E + EN+K K EL +L Q++ E Sbjct: 302 ERRQQQKLKMQ------------------AEIKRINDENQKQKAELLAQEKLADQMVMEF 343 Query: 265 IKVRTDTKLDFNLEKSRV-----KELYSLN--EKKLLELRTEIVALHAQQDRALTQTD-- 315 K + + +F E+ R+ KE+ L ++K + + E AL A++++ + + Sbjct: 344 TKKKMAREAEFEAEQERIRREKEKEIARLRAMQEKAQDYQAEQDALRAKRNQEVADREWR 403 Query: 316 --------RKIETEVAGLKTMLE 330 +K+ETE K+ LE Sbjct: 404 RKEKENARKKMETEAELRKSRLE 426 >gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] Length = 2230 Score = 40.4 bits (93), Expect = 0.002 Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 11/134 (8%) Query: 214 EITFQQVMSQIANVKKDMIIL--EKSEFSA----LRAENEKIKLELHQLKQQVMDEVIKV 267 EI Q+ ++A +K+ +++ EK E + L+ E K L++L++Q+ + V Sbjct: 1063 EIQLQEKEQEVAELKQKILLFGCEKEEMNKEITWLKEEGVKQDTTLNELQEQLKQKSAHV 1122 Query: 268 RT----DTKLDFNLEKSRVKELYSLNEKKLL-ELRTEIVALHAQQDRALTQTDRKIETEV 322 + +TKL +LEK V SL E L E E+ L + R +++ K++T Sbjct: 1123 NSLAQDETKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTD 1182 Query: 323 AGLKTMLESHKLDN 336 +++ SH+ N Sbjct: 1183 EEFQSLKSSHEKSN 1196 >gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] Length = 1946 Score = 38.1 bits (87), Expect = 0.012 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 9/87 (10%) Query: 242 LRAENEKIKLELHQLKQQV---------MDEVIKVRTDTKLDFNLEKSRVKELYSLNEKK 292 LR EN+ ++ E+ L QV M++V K+ + K + + + NE K Sbjct: 1510 LRRENKNLQEEISNLTNQVREGTKNLTEMEKVKKLIEEEKTEVQVTLEETEGALERNESK 1569 Query: 293 LLELRTEIVALHAQQDRALTQTDRKIE 319 +L + E++ A+ +R L++ D +IE Sbjct: 1570 ILHFQLELLEAKAELERKLSEKDEEIE 1596 Score = 32.3 bits (72), Expect = 0.67 Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 11/211 (5%) Query: 121 GALPQYHGPAPALVSCRRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGF 180 GAL Q A ++C REL G+L+L R+ + S R L + L Sbjct: 1048 GALEQER---KARMNCERELHKLEGNLKLNRESMENLESSQRHLAEELRKKELELSQMNS 1104 Query: 181 ATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMS-QIANVKKDMIILEKSEF 239 + + +V+ L K ++ + KD+ K++ E T + M + A++ +D+ L +E Sbjct: 1105 KVENEKGLVAQLQKTVK-ELQTQIKDLKEKLEAERTTRAKMERERADLTQDLADL--NER 1161 Query: 240 SALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTE 299 + +LE+ + ++ ++ + + L F + +K+ ++ L EL + Sbjct: 1162 LEEVGGSSLAQLEITKKQETKFQKLHRDMEEATLHFETTSASLKKRHA---DSLAELEGQ 1218 Query: 300 IVALHAQQDRALTQTDRKIETEVAGLKTMLE 330 + L Q + L + ++ EV L T +E Sbjct: 1219 VENLQ-QVKQKLEKDKSDLQLEVDDLLTRVE 1248 >gi|55770834 centromere protein F [Homo sapiens] Length = 3114 Score = 37.7 bits (86), Expect = 0.016 Identities = 40/193 (20%), Positives = 94/193 (48%), Gaps = 31/193 (16%) Query: 176 EDNGFATQQAEIIVSALVKILEANMDIVYK---------DMVTKMQQEITFQQVMSQIAN 226 ++N ++ ++ V+ L K + + D++ K D ++K ++E + ++S + Sbjct: 547 QENSLTLEKLKLAVADLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKES--KALLSALEL 604 Query: 227 VKKDMIIL--EKSEFSALRAENEKIKLELHQLKQQVMDEVIKVRTDTKL------DFN-- 276 KK+ L EK+ FS ++ENEK+ ++ K+ + ++ + T K ++N Sbjct: 605 KKKEYEELKEEKTLFSCWKSENEKLLTQMESEKENLQSKINHLETCLKTQQIKSHEYNER 664 Query: 277 ---LEKSR------VKELYSLNEKKLLELRTEIVA-LHAQQDRALTQTDRKIETEVAGLK 326 LE R ++ L+++ + K +E+ T+ +A + QQ + + E E LK Sbjct: 665 VRTLEMDRENLSVEIRNLHNVLDSKSVEVETQKLAYMELQQKAEFSDQKHQKEIENMCLK 724 Query: 327 TMLESHKLDNIKY 339 T + +++++++ Sbjct: 725 TSQLTGQVEDLEH 737 Score = 32.3 bits (72), Expect = 0.67 Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 10/110 (9%) Query: 212 QQEITFQQVMSQIANVKKDMIILEKSE----FSALRAENEKIKLELHQLKQQVMDEVIKV 267 +QE+T + QI + + S L+A+N++++ ++++L+ ++ ++ Sbjct: 249 EQEVTPSRSTLQIGKRDANSSFFDNSSSPHLLDQLKAQNQELRNKINELELRLQGHEKEM 308 Query: 268 RTDT----KLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQ 313 + +L LEK++V+ + EK L + R E+V AQ D+A T+ Sbjct: 309 KGQVNKFQELQLQLEKAKVELIEK--EKVLNKCRDELVRTTAQYDQASTK 356 Score = 31.2 bits (69), Expect = 1.5 Identities = 22/97 (22%), Positives = 54/97 (55%), Gaps = 11/97 (11%) Query: 208 VTKMQQEITFQQ-----VMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMD 262 ++K+Q++ + Q +S + N +K++ +L + +AE +++K H L+ + + Sbjct: 885 ISKLQEDTSAHQNVVAETLSALENKEKELQLLN-DKVETEQAEIQELKKSNHLLEDSLKE 943 Query: 263 EVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTE 299 +++ ++T +LEK + + SLN++++ EL E Sbjct: 944 --LQLLSET---LSLEKKEMSSIISLNKREIEELTQE 975 >gi|7657138 golgi integral membrane protein 4 [Homo sapiens] Length = 696 Score = 37.4 bits (85), Expect = 0.021 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 24/155 (15%) Query: 196 LEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILE--------------KSEFSA 241 L A + +VY+ + + E + Q+ + K+D ++ + S +SA Sbjct: 57 LSAQLQVVYEH---RSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSA 113 Query: 242 LRAENEKIKLELHQLKQQVMD---EVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRT 298 L +++ +K + +LK+Q D E K D FN K + +L E++L +L+ Sbjct: 114 LNVQHQMLKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKE 173 Query: 299 EIVALHAQQDRALTQTDRKIETEVAGLKTMLESHK 333 + L +++R L + + I T++ +K + HK Sbjct: 174 TVYNLR-EENRQLRKAHQDIHTQLQDVK---QQHK 204 >gi|169178850 PREDICTED: similar to coiled-coil domain containing 29 [Homo sapiens] Length = 197 Score = 37.0 bits (84), Expect = 0.027 Identities = 31/137 (22%), Positives = 72/137 (52%), Gaps = 5/137 (3%) Query: 193 VKILEANMDIVYKDMVTKMQQEITFQQ-VMSQIANVKKDMIILEKSEFSALRAENEKIKL 251 +K + MDI+ K + K + ++ V S+ N+ KD ++++ S + + E KL Sbjct: 20 LKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKL 79 Query: 252 ELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQD-RA 310 E +Q + + +E++ ++T + + +E S+++E S +++ ++ ++ +H Q + Sbjct: 80 EENQ--KMLEEEILNLKTHME-NSMVELSKLQEYKSELDERAMQAVEKLKEIHLQMELDC 136 Query: 311 LTQTDRKIETEVAGLKT 327 + Q R+ + VA L T Sbjct: 137 VEQIIRETKRTVAVLDT 153 >gi|31542661 transmembrane protein 57 [Homo sapiens] Length = 664 Score = 37.0 bits (84), Expect = 0.027 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 13/158 (8%) Query: 191 ALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIK 250 ALV+ LE ++ + D+ Q E + +S +++ ++ + +SE LR ENE ++ Sbjct: 382 ALVR-LEQDIKKLKADLQASRQVEQELRSQISSLSSTERGI----RSEMGQLRQENELLQ 436 Query: 251 LELH---QLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRT--EIVALHA 305 +LH Q+KQ+ + ++ K + K+L ++K LE T VA A Sbjct: 437 NKLHNAVQMKQKDKQNISQLEKKLKAEQEARSFVEKQLMEEKKRKKLEEATAARAVAFAA 496 Query: 306 QQDRALTQT--DRKIETEVAGLK-TMLESHKLDNIKYL 340 T+T +R E E G K TM K D I+ L Sbjct: 497 ASRGECTETLRNRIRELEAEGKKLTMDMKVKEDQIREL 534 >gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with transmembrane signal), 1 [Homo sapiens] Length = 3259 Score = 37.0 bits (84), Expect = 0.027 Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 20/149 (13%) Query: 197 EANMDIVYKDMVTKMQQEITFQQ---VMSQIANVKKDMIILEKSE------FSALRAENE 247 + N I KD K E+ QQ + ++ A +++ + E++ F+AL+ E + Sbjct: 2539 DLNQVITIKDSQQKQLLEVQLQQNKELENKYAKLEEKLKESEEANEDLRRSFNALQEEKQ 2598 Query: 248 KIKLELHQLK---QQVMDEVIKVRTDTKLDFNLEKSRVKE--------LYSLNEKKLLEL 296 + E+ LK Q+ +V ++ + L + +VKE L+S ++K++ EL Sbjct: 2599 DLSKEIESLKVSISQLTRQVTALQEEGTLGLYHAQLKVKEEEVHRLSALFSSSQKRIAEL 2658 Query: 297 RTEIVALHAQQDRALTQTDRKIETEVAGL 325 E+V + + + + + + K++ E+ L Sbjct: 2659 EEELVCVQKEAAKKVGEIEDKLKKELKHL 2687 Score = 31.2 bits (69), Expect = 1.5 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 17/154 (11%) Query: 189 VSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDM-------IILEKSEFSA 241 +SAL + ++A + + ++ EIT + + + + KK ++L+ ++ A Sbjct: 2035 ISALERTVKA---LEFVQTESQKDLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSEA 2091 Query: 242 LR--AENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLN--EKKLLELR 297 R A+N K+K EL K+ V ++ + D L+ LE++ K L ++KL LR Sbjct: 2092 ARVLADNLKLKKELQSNKESVKSQM--KQKDEDLERRLEQAEEKHLKEKKNMQEKLDALR 2149 Query: 298 TEIVALHAQQDRALTQTDRKIETEVAGLKTMLES 331 E V L + + T K + EV L+ L+S Sbjct: 2150 REKVHLE-ETIGEIQVTLNKKDKEVQQLQENLDS 2182 >gi|58530842 desmoplakin isoform II [Homo sapiens] Length = 2272 Score = 36.6 bits (83), Expect = 0.036 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 28/198 (14%) Query: 139 ELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVC---LLEDNGFATQQAEIIVSALVKI 195 E ++ ++ER R G+RK ++ + E TQ + S LVKI Sbjct: 1161 EKAIKEKEYEIERLRVLLQEEGTRKREYENELAKASNRIQESKNQCTQVVQERESLLVKI 1220 Query: 196 LEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQ 255 D K + +++ E+ N K + E L E ++I+ +L+Q Sbjct: 1221 KVLEQD---KARLQRLEDEL----------NRAKSTLEAETRVKQRLECEKQQIQNDLNQ 1267 Query: 256 LKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQTD 315 K Q + +R K++ EKS E++ LR+EI L A+ R + Sbjct: 1268 WKTQYSRKEEAIR---KIESEREKS---------EREKNSLRSEIERLQAEIKRIEERCR 1315 Query: 316 RKIETEVAGLKTMLESHK 333 RK+E ++ LE+ + Sbjct: 1316 RKLEDSTRETQSQLETER 1333 >gi|15431310 keratin 14 [Homo sapiens] Length = 472 Score = 36.6 bits (83), Expect = 0.036 Identities = 31/147 (21%), Positives = 74/147 (50%), Gaps = 9/147 (6%) Query: 204 YKDMVTKMQQE-----ITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQ 258 Y+ M K +++ T + +++ +++ KSE S LR + +++EL Q + Sbjct: 291 YEKMAEKNRKDAEEWFFTKTEELNREVATNSELVQSGKSEISELRRTMQNLEIEL-QSQL 349 Query: 259 QVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQTDRKI 318 + + +TK + ++ ++++E+ E++L +LR E+ + Q+ + L ++ Sbjct: 350 SMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQN-QEYKILLDVKTRL 408 Query: 319 ETEVAGLKTMLESH--KLDNIKYLAGS 343 E E+A + +LE L + ++ +GS Sbjct: 409 EQEIATYRRLLEGEDAHLSSSQFSSGS 435 >gi|151101151 coiled-coil domain containing 2 isoform b [Homo sapiens] Length = 372 Score = 36.2 bits (82), Expect = 0.047 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 15/142 (10%) Query: 199 NMDIVYKDMVTKMQQ----EITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELH 254 ++D+++ + K +Q E +Q ++ K+M + ++ ++ NEK+ EL Sbjct: 186 SLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELD 245 Query: 255 QLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQT 314 L+QQ+ + +K + L+ + S+VK+ L +KL EL + H Q + Sbjct: 246 TLQQQLDSQNMKKES---LEAEIAHSQVKQEAVLLHEKLYELES-----HRDQ---MIAE 294 Query: 315 DRKIETEVAGLKTMLESHKLDN 336 D+ I + + + +L+ K DN Sbjct: 295 DKSIGSPMEEREKLLKQIKDDN 316 >gi|151101140 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 36.2 bits (82), Expect = 0.047 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 15/142 (10%) Query: 199 NMDIVYKDMVTKMQQ----EITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELH 254 ++D+++ + K +Q E +Q ++ K+M + ++ ++ NEK+ EL Sbjct: 186 SLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELD 245 Query: 255 QLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQT 314 L+QQ+ + +K + L+ + S+VK+ L +KL EL + H Q + Sbjct: 246 TLQQQLDSQNMKKES---LEAEIAHSQVKQEAVLLHEKLYELES-----HRDQ---MIAE 294 Query: 315 DRKIETEVAGLKTMLESHKLDN 336 D+ I + + + +L+ K DN Sbjct: 295 DKSIGSPMEEREKLLKQIKDDN 316 >gi|151105223 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 36.2 bits (82), Expect = 0.047 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 15/142 (10%) Query: 199 NMDIVYKDMVTKMQQ----EITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELH 254 ++D+++ + K +Q E +Q ++ K+M + ++ ++ NEK+ EL Sbjct: 186 SLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELD 245 Query: 255 QLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQT 314 L+QQ+ + +K + L+ + S+VK+ L +KL EL + H Q + Sbjct: 246 TLQQQLDSQNMKKES---LEAEIAHSQVKQEAVLLHEKLYELES-----HRDQ---MIAE 294 Query: 315 DRKIETEVAGLKTMLESHKLDN 336 D+ I + + + +L+ K DN Sbjct: 295 DKSIGSPMEEREKLLKQIKDDN 316 >gi|151105229 coiled-coil domain containing 2 isoform a [Homo sapiens] Length = 600 Score = 36.2 bits (82), Expect = 0.047 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 15/142 (10%) Query: 199 NMDIVYKDMVTKMQQ----EITFQQVMSQIANVKKDMIILEKSEFSALRAENEKIKLELH 254 ++D+++ + K +Q E +Q ++ K+M + ++ ++ NEK+ EL Sbjct: 186 SLDVIFTERQAKEKQIRSVEEEIEQEKQATDDIIKNMSFENQVKYLEMKTTNEKLLQELD 245 Query: 255 QLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQT 314 L+QQ+ + +K + L+ + S+VK+ L +KL EL + H Q + Sbjct: 246 TLQQQLDSQNMKKES---LEAEIAHSQVKQEAVLLHEKLYELES-----HRDQ---MIAE 294 Query: 315 DRKIETEVAGLKTMLESHKLDN 336 D+ I + + + +L+ K DN Sbjct: 295 DKSIGSPMEEREKLLKQIKDDN 316 >gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] Length = 1498 Score = 35.8 bits (81), Expect = 0.061 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 18/211 (8%) Query: 137 RRELSLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKI- 195 R+ ++ G LQ +K RD + + L FD +V + E N +Q E + K Sbjct: 912 RQHMADLEGHLQSAQKERDEMETHLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAI 971 Query: 196 ---------LEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAE- 245 L +++ K+M TK + ++S+ +E LRA+ Sbjct: 972 TEQKQKMRRLGSDLTSAQKEMKTKHKAYENAVGILSRRLQEALAAKEAADAELGQLRAQG 1031 Query: 246 -NEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVAL- 303 + L LH+ Q + E+ V L LEK ++E+ +L ++L E R +++ L Sbjct: 1032 GSSDSSLALHERIQALEAELQAVSHSKTL---LEK-ELQEVIALTSQELEESREKVLELE 1087 Query: 304 -HAQQDRALTQTDRKIETEVAGLKTMLESHK 333 Q+ R + +++E L LE K Sbjct: 1088 DELQESRGFRKKIKRLEESNKKLALELEHEK 1118 >gi|149363642 coiled-coil domain containing 144A [Homo sapiens] Length = 1427 Score = 35.4 bits (80), Expect = 0.080 Identities = 49/217 (22%), Positives = 102/217 (47%), Gaps = 33/217 (15%) Query: 141 SLSAGSLQLERKRRDFTSSGSRKLYFDTHALVCLLEDNGFATQQAEI--IVSALVKILEA 198 +L SL LER +RD + + +K +T + + +Q+++ ++ + E Sbjct: 992 ALGRESLILERVQRDLSQTQCQKK--ETEQM--------YQIEQSKLKKYIAKQESVEER 1041 Query: 199 NMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSA---LRAENEKIKLELHQ 255 + ++M+ + Q + ++ SQ +K ++ SA L+AE+EK L L + Sbjct: 1042 LSQLQSENMLLRQQLDDAHKKANSQ----EKTSSTIQDQFHSAAKNLQAESEKQILSLQE 1097 Query: 256 LKQQVMDEV--IKVRTD--------TKLDFNLEKSRVKE--LYSLNEKKLLELRTEIVAL 303 +++MDE +K R D K+D + V L+ E ++L+L+ + ++ Sbjct: 1098 KNKELMDEYNHLKERMDQCEKEKAGRKIDLTEAQETVPSRCLHLDAENEVLQLQQTLFSM 1157 Query: 304 HA--QQDRALTQTDRKIETEVAGLKTMLESHKLDNIK 338 A +Q L + ++++ EV LK+ +E + L+ K Sbjct: 1158 KAIQKQCETLQKNKKQLKQEVVNLKSYMERNMLERGK 1194 Score = 30.8 bits (68), Expect = 2.0 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Query: 183 QQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSE---F 239 +QA + LV++ E N + K Q E+T + + S+I+ +K K+E + Sbjct: 1223 KQAAVSHEQLVQLREDNTTSI------KTQMELTIKDLESEISRIKTSQADFNKTELERY 1276 Query: 240 SALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYS 287 L E K++ L + + + +V T+L E++R + L++ Sbjct: 1277 KELYLEEVKVRESLSNELSRTNEMIAEV--STQLTVEKEQTRSRSLFT 1322 >gi|215490011 small inducible cytokine subfamily E, member 1 isoform b precursor [Homo sapiens] Length = 336 Score = 35.0 bits (79), Expect = 0.10 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 198 ANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKS--EFSALRAENEKIKLELHQ 255 AN D V K + K + + + Q ++ K+ IL+ + E LR EN K+K E+ + Sbjct: 26 ANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEE 85 Query: 256 LKQQVMDEVIK 266 LKQ+++ I+ Sbjct: 86 LKQELIQAEIQ 96 >gi|215490009 small inducible cytokine subfamily E, member 1 isoform a precursor [Homo sapiens] Length = 312 Score = 35.0 bits (79), Expect = 0.10 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 198 ANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKS--EFSALRAENEKIKLELHQ 255 AN D V K + K + + + Q ++ K+ IL+ + E LR EN K+K E+ + Sbjct: 2 ANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEE 61 Query: 256 LKQQVMDEVIK 266 LKQ+++ I+ Sbjct: 62 LKQELIQAEIQ 72 >gi|45006986 small inducible cytokine subfamily E, member 1 isoform a precursor [Homo sapiens] Length = 312 Score = 35.0 bits (79), Expect = 0.10 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 198 ANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKS--EFSALRAENEKIKLELHQ 255 AN D V K + K + + + Q ++ K+ IL+ + E LR EN K+K E+ + Sbjct: 2 ANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEE 61 Query: 256 LKQQVMDEVIK 266 LKQ+++ I+ Sbjct: 62 LKQELIQAEIQ 72 >gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo sapiens] Length = 261 Score = 35.0 bits (79), Expect = 0.10 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 27 LSGRPGGSETSARRCLSALSDGLGALRPRAPAARGGVSRASPLLLLLLVPSPRLAAAAPR 86 L GRPG + R LSA G RPR R PL L+L++ P L P Sbjct: 137 LHGRPG-RDARPWRLLSACPSG----RPRP--------RPLPLPLMLMLMLPTLQPLPPP 183 Query: 87 RQLGDWERSRLGYA-APPAGRSSAWRCSPGVAAAAGALPQYHGPAPA 132 R R G A PA + + R PG ++ + A + P+PA Sbjct: 184 GSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPA 230 >gi|239749325 PREDICTED: hypothetical protein [Homo sapiens] Length = 155 Score = 35.0 bits (79), Expect = 0.10 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 7/128 (5%) Query: 4 GSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSALSDGLGALRPRAPAARGGV 63 G+VG R Q PG + LP L +P G+ + A+ G P G Sbjct: 30 GTVG--RQQGGPGHGNVDHLP-NLGRQPRGAGSRGASAPRAVRTGAA---PEVVVQSGHR 83 Query: 64 SRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCSPGVAAAAGAL 123 S AS L +P + RR+ G E SR G AA P GR+ + + G A+ A Sbjct: 84 SHASKRRFLEEGEAPA-RRLSERRRGGGKEESRPGTAAAPGGRAGLYPRAAGPASREPAR 142 Query: 124 PQYHGPAP 131 P + AP Sbjct: 143 PTHRPRAP 150 >gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo sapiens] Length = 261 Score = 35.0 bits (79), Expect = 0.10 Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 14/107 (13%) Query: 27 LSGRPGGSETSARRCLSALSDGLGALRPRAPAARGGVSRASPLLLLLLVPSPRLAAAAPR 86 L GRPG + R LSA G RPR R PL L+L++ P L P Sbjct: 137 LHGRPG-RDARPWRLLSACPSG----RPRP--------RPLPLPLMLMLMLPTLQPLPPP 183 Query: 87 RQLGDWERSRLGYA-APPAGRSSAWRCSPGVAAAAGALPQYHGPAPA 132 R R G A PA + + R PG ++ + A + P+PA Sbjct: 184 GSARRPRRGRAGRGGAAPAPPTGSMRAGPGPSSPSAAPTSHPPPSPA 230 >gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo sapiens] Length = 636 Score = 35.0 bits (79), Expect = 0.10 Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 57 PAARGGVSRASPLLLLLLVPSPRL---AAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCS 113 P R G + P L PSPRL PRR+ G R G P A ++A + Sbjct: 284 PPTRPGAADICPSRLFA-PPSPRLFPRPGFLPRRRRGVLAHRRRGVLLPAAAAAAAAAAA 342 Query: 114 PGVAAAAGALPQYHGPAPALVSC 136 AAAA L Q P A C Sbjct: 343 AAAAAAAFCLTQLFAPPTAAAFC 365 >gi|239509122 PREDICTED: hypothetical protein [Homo sapiens] Length = 155 Score = 35.0 bits (79), Expect = 0.10 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 7/128 (5%) Query: 4 GSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSALSDGLGALRPRAPAARGGV 63 G+VG R Q PG + LP L +P G+ + A+ G P G Sbjct: 30 GTVG--RQQGGPGHGNVDHLP-NLGRQPRGAGSRGASAPRAVRTGAA---PEVVVQSGHR 83 Query: 64 SRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPAGRSSAWRCSPGVAAAAGAL 123 S AS L +P + RR+ G E SR G AA P GR+ + + G A+ A Sbjct: 84 SHASKRRFLEEGEAPA-RRLSERRRGGGKEESRPGTAAAPGGRAGLYPRAAGPASREPAR 142 Query: 124 PQYHGPAP 131 P + AP Sbjct: 143 PTHRPRAP 150 >gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens] Length = 728 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 211 MQQEITFQQV-----MSQIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMDEVI 265 + QE+ F +V + + K+++ + E LRAENEK E ++ + ++ E+ Sbjct: 587 LHQELEFLRVAKKEKLREATEAKRNL----RKEIERLRAENEKKMKEANESRLRLKRELE 642 Query: 266 KVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRALTQTDRKIETE 321 + R D E R++ YS + L ++ HA+ DR + D E E Sbjct: 643 QARQARVCDKGCEAGRLRAKYSAQIEDL-----QVKLQHAEADREQLRADLLRERE 693 >gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo sapiens] Length = 146 Score = 34.7 bits (78), Expect = 0.14 Identities = 25/115 (21%), Positives = 62/115 (53%), Gaps = 4/115 (3%) Query: 193 VKILEANMDIVYKDMVTKMQQEITFQQ-VMSQIANVKKDMIILEKSEFSALRAENEKIKL 251 +K + MDI+ K + K + ++ V S+ N+ KD ++++ S + + E KL Sbjct: 20 LKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQELLSMKKVQQECEKL 79 Query: 252 ELHQLKQQVMDEVIKVRTDTKLDFNLEKSRVKELYSLNEKKLLELRTEIVALHAQ 306 E +Q + + +E++ ++T + + +E S+++E S +++ ++ ++ +H Q Sbjct: 80 EENQ--KMLEEEILNLKTHME-NSMVELSKLQEYKSELDERAMQAVEKLKEIHLQ 131 >gi|126362971 serine/threonine kinase 10 [Homo sapiens] Length = 968 Score = 34.7 bits (78), Expect = 0.14 Identities = 30/150 (20%), Positives = 69/150 (46%), Gaps = 14/150 (9%) Query: 194 KILEANMDIVYKDMVTKMQQEITFQQVMSQIANVKKDMIILEKSEFSALRAENE------ 247 K+ + + K +V ++ IT +++S+ ++M L + E LR + Sbjct: 521 KLYKKTLKRTRKFVVDGVEVSITTSKIISEDEKKDEEMRFLRRQELRELRLLQKEEHRNQ 580 Query: 248 -----KIKLELHQLKQQVMDEVIKVRT--DTKLDFNLEKSRVKELYSLNEKKLLELRTEI 300 K +L+L Q+ ++ E+ + DT+L+ NLE+ + +++ + + + R E Sbjct: 581 TQLSNKHELQLEQMHKRFEQEINAKKKFFDTELE-NLERQQKQQVEKMEQDHAVRRREEA 639 Query: 301 VALHAQQDRALTQTDRKIETEVAGLKTMLE 330 + +QDR T+ +++ +K +E Sbjct: 640 RRIRLEQDRDYTRFQEQLKLMKKEVKNEVE 669 Score = 30.0 bits (66), Expect = 3.3 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 33/203 (16%) Query: 147 LQLERKRRDFTSS-GSRKLYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYK 205 LQLE+ + F ++K +FDT E QQ + V+ +E + + + Sbjct: 589 LQLEQMHKRFEQEINAKKKFFDT-------ELENLERQQKQ-----QVEKMEQDHAVRRR 636 Query: 206 DMVTK--MQQEITFQQVMSQIANVKKDMIILEKSEFSAL----RAENEKIKLELHQLKQQ 259 + + ++Q+ + + Q+ +KK++ K+E L R E+ K K+E H K+Q Sbjct: 637 EEARRIRLEQDRDYTRFQEQLKLMKKEV----KNEVEKLPRQQRKESMKQKMEEHTQKKQ 692 Query: 260 VMDE--VIKVRTDTKLDF------NLEKSRVKELYSLNEKKLLELRTEIVALHAQQDRAL 311 ++D V K + D +L N + KE L +K+ L LR AL ++ L Sbjct: 693 LLDRDFVAKQKEDLELAMKRLTTDNRREICDKERECLMKKQEL-LRDREAALWEMEEHQL 751 Query: 312 TQTDRKIETEVAGLKTMLESHKL 334 + + ++ ++ + L+ H+L Sbjct: 752 QERHQLVKQQLKD-QYFLQRHEL 773 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.133 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,942,355 Number of Sequences: 37866 Number of extensions: 617065 Number of successful extensions: 3158 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 252 Number of HSP's that attempted gapping in prelim test: 2964 Number of HSP's gapped (non-prelim): 448 length of query: 359 length of database: 18,247,518 effective HSP length: 103 effective length of query: 256 effective length of database: 14,347,320 effective search space: 3672913920 effective search space used: 3672913920 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.