CCDC90B 11907

Name: CCDC90B	Sequence: fasta or formatted (254aa)		NCBI GI: 20149663
Description: coiled-coil domain containing 90B		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 18 2 C cysteine 0.4 1 1 D aspartate 6.3 16 1 E glutamate 8.3 21 1 F phenylalanine 4.7 12 2 G glycine 2.4 6 1 H histidine 2.0 5 1 I isoleucine 5.9 15 2 K lysine 7.1 18 2 L leucine 9.8 25 1 M methionine 3.5 9 1 N asparagine 3.1 8 1 P proline 1.6 4 1 Q glutamine 6.3 16 2 R arginine 7.5 19 2 S serine 6.3 16 1 T threonine 10.6 27 4 V valine 4.3 11 1 W tryptophan 1.2 3 1 Y tyrosine 1.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 90B CCDC90A 0.430 coiled-coil domain containing 90A C6orf97 0.036 hypothetical protein LOC80129 KRT17 0.030 keratin 17 CLIP1 0.030 restin isoform b CLIP1 0.030 restin isoform a ANGPTL1 0.030 angiopoietin-like 1 precursor CEP290 0.030 centrosomal protein 290kDa ANKRD26 0.030 ankyrin repeat domain 26 DST 0.028 dystonin isoform 1e precursor CCDC14 0.028 coiled-coil domain containing 14 CCDC144A 0.028 coiled-coil domain containing 144A KRT20 0.025 keratin 20 IFT74 0.025 coiled-coil domain containing 2 isoform b IFT74 0.025 coiled-coil domain containing 2 isoform a IFT74 0.025 coiled-coil domain containing 2 isoform a IFT74 0.025 coiled-coil domain containing 2 isoform a LAMB4 0.025 laminin, beta 4 NUMA1 0.025 nuclear mitotic apparatus protein 1 MYO18A 0.023 myosin 18A isoform b MYO18A 0.023 myosin 18A isoform a FILIP1L 0.023 filamin A interacting protein 1-like isoform 3 [Hom... FILIP1L 0.023 filamin A interacting protein 1-like isoform 2 [Hom... FILIP1L 0.023 filamin A interacting protein 1-like isoform 1 [Hom... CCDC152 0.023 coiled-coil domain containing 152 ANGPTL2 0.023 angiopoietin-like 2 precursor KRT14 0.021 keratin 14 GOLGA4 0.021 golgi autoantigen, golgin subfamily a, 4 CCDC99 0.021 coiled-coil domain containing 99 MYH9 0.021 myosin, heavy polypeptide 9, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.