CCDC90A 35311

Name: CCDC90A	Sequence: fasta or formatted (359aa)		NCBI GI: 72534716
Description: coiled-coil domain containing 90A		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.3 37 4 C cysteine 1.7 6 1 D aspartate 4.2 15 1 E glutamate 6.1 22 1 F phenylalanine 2.5 9 1 G glycine 6.7 24 2 H histidine 1.4 5 1 I isoleucine 4.2 15 2 K lysine 5.8 21 2 L leucine 14.2 51 6 M methionine 2.2 8 1 N asparagine 1.9 7 1 P proline 4.2 15 2 Q glutamine 5.3 19 2 R arginine 8.6 31 2 S serine 7.8 28 2 T threonine 4.5 16 1 V valine 5.6 20 1 W tryptophan 0.8 3 1 Y tyrosine 1.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 90A CCDC90B 0.302 coiled-coil domain containing 90B FHAD1 0.025 forkhead-associated (FHA) phosphopeptide binding do... CCDC19 0.025 nasopharyngeal epithelium specific protein 1 GOLGA4 0.022 golgi autoantigen, golgin subfamily a, 4 MYH15 0.019 myosin, heavy polypeptide 15 CENPF 0.019 centromere protein F GOLIM4 0.018 golgi integral membrane protein 4 LOC728897 0.018 PREDICTED: similar to coiled-coil domain containing... TMEM57 0.018 transmembrane protein 57 GOLGB1 0.018 golgi autoantigen, golgin subfamily b, macrogolgin ... DSP 0.018 desmoplakin isoform II KRT14 0.018 keratin 14 IFT74 0.016 coiled-coil domain containing 2 isoform b IFT74 0.016 coiled-coil domain containing 2 isoform a IFT74 0.016 coiled-coil domain containing 2 isoform a IFT74 0.016 coiled-coil domain containing 2 isoform a GOLGA3 0.016 Golgi autoantigen, golgin subfamily a, 3 CCDC144A 0.015 coiled-coil domain containing 144A AIMP1 0.015 small inducible cytokine subfamily E, member 1 isof... AIMP1 0.015 small inducible cytokine subfamily E, member 1 isof... AIMP1 0.015 small inducible cytokine subfamily E, member 1 isofo... LOC100291220 0.015 PREDICTED: hypothetical protein XP_002347633 LOC100129810 0.015 PREDICTED: hypothetical protein LOC100287224 0.015 PREDICTED: hypothetical protein XP_002343483 LOC100287723 0.015 PREDICTED: hypothetical protein XP_002342271 LOC100129810 0.015 PREDICTED: hypothetical protein SKI 0.015 v-ski sarcoma viral oncogene homolog LOC100287836 0.015 PREDICTED: hypothetical protein XP_002344496 STK10 0.015 serine/threonine kinase 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.