SPTLC3 2263

Name: SPTLC3	Sequence: fasta or formatted (552aa)		NCBI GI: 119220554
Description: serine palmitoyltransferase, long chain base subunit 3		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 41 2 C cysteine 1.1 6 1 D aspartate 4.7 26 2 E glutamate 6.2 34 2 F phenylalanine 4.7 26 2 G glycine 8.5 47 3 H histidine 2.9 16 1 I isoleucine 5.3 29 2 K lysine 6.3 35 3 L leucine 10.0 55 3 M methionine 3.6 20 1 N asparagine 4.5 25 2 P proline 3.4 19 2 Q glutamine 3.1 17 2 R arginine 6.0 33 2 S serine 5.4 30 2 T threonine 4.7 26 2 V valine 7.1 39 4 W tryptophan 0.7 4 1 Y tyrosine 4.3 24 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 serine palmitoyltransferase, long chain base subuni... SPTLC2 0.693 serine palmitoyltransferase, long chain base subunit ... GCAT 0.141 glycine C-acetyltransferase precursor ALAS2 0.135 5-aminolevulinate synthase 2 isoform c precursor [Ho... ALAS2 0.135 5-aminolevulinate synthase 2 isoform b precursor [Ho... ALAS2 0.135 5-aminolevulinate synthase 2 isoform a precursor [Ho... SPTLC1 0.128 serine palmitoyltransferase subunit 1 isoform a [Homo... ALAS1 0.110 5-aminolevulinate synthase 1 ALAS1 0.110 5-aminolevulinate synthase 1 DPP7 0.005 dipeptidyl peptidase 7 preproprotein NT5DC3 0.005 5'-nucleotidase domain containing 3 GTF2H4 0.004 general transcription factor IIH, polypeptide 4, 52kD... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.