Guide to the Human Genome
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Name: CHCHD7 Sequence: fasta or formatted (85aa) NCBI GI: 58761520
Description:

coiled-coil-helix-coiled-coil-helix domain containing 7 isoform f

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [81aa] coiled-coil-helix-coiled-coil-helix domain containing 7 isoform a
alt prot [110aa] coiled-coil-helix-coiled-coil-helix domain containing 7 isoform b
alt prot [68aa] coiled-coil-helix-coiled-coil-helix domain containing 7 isoform c
alt prot [56aa] coiled-coil-helix-coiled-coil-helix domain containing 7 isoform e
alt prot [97aa] coiled-coil-helix-coiled-coil-helix domain containing 7 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          4           2
 C cysteine            4.7          4           1
 D aspartate           7.1          6           1
 E glutamate           5.9          5           1
 F phenylalanine       3.5          3           1
 G glycine             2.4          2           1
 H histidine           0.0          0           0
 I isoleucine          3.5          3           1
 K lysine              3.5          3           1
 L leucine             5.9          5           1
 M methionine          4.7          4           1
 N asparagine          8.2          7           2
 P proline             7.1          6           1
 Q glutamine           2.4          2           1
 R arginine           14.1         12           2
 S serine              7.1          6           1
 T threonine           4.7          4           1
 V valine              4.7          4           1
 W tryptophan          1.2          1           1
 Y tyrosine            4.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil-helix-coiled-coil-helix domain containin... 
CHCHD7                1.000   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                1.000   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                0.108   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                0.108   coiled-coil-helix-coiled-coil-helix domain containin...
CHCHD7                0.108   coiled-coil-helix-coiled-coil-helix domain containin...
MTCP1NB               0.013   mature T-cell proliferation 1 neighbor 
ZNF182                0.013   zinc finger protein 21 isoform 2 
ZNF182                0.013   zinc finger protein 21 isoform 1 
VPS54                 0.006   vacuolar protein sorting 54 isoform 2 
VPS54                 0.006   vacuolar protein sorting 54 isoform 1 
COX19                 0.006   COX19 cytochrome c oxidase assembly homolog 
TTPAL                 0.006   tocopherol (alpha) transfer protein-like 
TTPAL                 0.006   tocopherol (alpha) transfer protein-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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