Guide to the Human Genome
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Name: CYP7B1 Sequence: fasta or formatted (506aa) NCBI GI: 4758104
Description:

cytochrome P450, family 7, subfamily B, polypeptide 1

Referenced in:

Bile Acids and Other Cholesterol Derivatives
Cytochrome P450 Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         23           3
 C cysteine            1.8          9           1
 D aspartate           5.5         28           2
 E glutamate           6.3         32           2
 F phenylalanine       7.1         36           2
 G glycine             5.7         29           2
 H histidine           2.0         10           2
 I isoleucine          6.5         33           2
 K lysine              7.5         38           3
 L leucine            14.4         73           4
 M methionine          2.2         11           2
 N asparagine          2.4         12           2
 P proline             4.2         21           2
 Q glutamine           4.0         20           1
 R arginine            4.9         25           2
 S serine              6.5         33           2
 T threonine           4.9         25           2
 V valine              4.7         24           2
 W tryptophan          1.0          5           1
 Y tyrosine            3.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 7, subfamily B, polypeptide 1... 
CYP7A1                0.327   cytochrome P450, family 7, subfamily A, polypeptide...
CYP8B1                0.253   cytochrome P450, family 8, subfamily B, polypeptide...
PTGIS                 0.219   prostaglandin I2 (prostacyclin) synthase 
CYP39A1               0.151   cytochrome P450, family 39, subfamily A, polypeptide...
CYP3A4                0.056   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP3A5                0.055   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP3A43               0.055   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP51A1               0.052   cytochrome P450, family 51, subfamily A, polypeptide ...
CYP3A43               0.049   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.049   cytochrome P450, family 4, subfamily v, polypeptide...
CYP27B1               0.047   cytochrome P450, family 27, subfamily B, polypeptide ...
CYP3A7                0.046   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP24A1               0.043   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP17A1               0.043   cytochrome P450, family 17 
CYP2J2                0.035   cytochrome P450, family 2, subfamily J, polypeptide ...
CYP11A1               0.035   cytochrome P450, family 11, subfamily A, polypeptid...
CYP11A1               0.035   cytochrome P450, family 11, subfamily A, polypeptid...
CYP2C8                0.034   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP2U1                0.034   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP2C9                0.033   cytochrome P450, family 2, subfamily C, polypeptide ...
CYP4F11               0.033   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.033   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP51A1               0.033   cytochrome P450, family 51, subfamily A, polypeptid...
CYP2E1                0.033   cytochrome P450, family 2, subfamily E, polypeptide ...
CYP11B1               0.033   cytochrome P450, family 11, subfamily B, polypeptide...
CYP2F1                0.033   cytochrome P450, family 2, subfamily F, polypeptide ...
CYP4F12               0.033   cytochrome P450, family 4, subfamily F, polypeptide...
CYP3A43               0.032   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4F8                0.032   cytochrome P450, family 4, subfamily F, polypeptide 8...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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