Guide to the Human Genome
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Name: NDUFS5 Sequence: fasta or formatted (106aa) NCBI GI: 4758790
Description:

NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          5           1
 C cysteine            3.8          4           1
 D aspartate           4.7          5           2
 E glutamate           9.4         10           1
 F phenylalanine       3.8          4           1
 G glycine             8.5          9           1
 H histidine           3.8          4           2
 I isoleucine          8.5          9           1
 K lysine             10.4         11           1
 L leucine             5.7          6           2
 M methionine          2.8          3           1
 N asparagine          0.9          1           1
 P proline             6.6          7           3
 Q glutamine           4.7          5           1
 R arginine            9.4         10           2
 S serine              0.9          1           1
 T threonine           4.7          5           1
 V valine              0.9          1           1
 W tryptophan          1.9          2           1
 Y tyrosine            3.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa... 
LOC100130794          0.840   PREDICTED: similar to NADH dehydrogenase (ubiquinon...
LOC100130794          0.840   PREDICTED: similar to NADH dehydrogenase (ubiquinon...
LOC100130794          0.840   PREDICTED: similar to NADH dehydrogenase (ubiquinon...
LOC100293439          0.714   PREDICTED: similar to NADH dehydrogenase [ubiquinon...
LOC100291390          0.714   PREDICTED: hypothetical protein XP_002346575 
LOC100286918          0.714   PREDICTED: hypothetical protein XP_002342136 
ST13                  0.063   heat shock 70kD protein binding protein 
COX19                 0.039   COX19 cytochrome c oxidase assembly homolog 
ZNF611                0.015   zinc finger protein 611 isoform b 
ZNF611                0.015   zinc finger protein 611 isoform a 
ZNF611                0.015   zinc finger protein 611 isoform a 
ZNF611                0.015   zinc finger protein 611 isoform a 
CAPN9                 0.010   calpain 9 isoform 2 
CAPN9                 0.010   calpain 9 isoform 1 
SULF2                 0.010   sulfatase 2 isoform a precursor 
SULF2                 0.010   sulfatase 2 isoform b precursor 
SULF2                 0.010   sulfatase 2 isoform a precursor 
ZNF92                 0.010   zinc finger protein 92 isoform 1 
ZNF92                 0.010   zinc finger protein 92 isoform 2 
ZNF761                0.010   zinc finger protein 761 
CAPN11                0.010   calpain 11 
ZNF273                0.010   zinc finger protein 273 
AEBP1                 0.010   adipocyte enhancer binding protein 1 precursor [Homo...
ZNF676                0.010   zinc finger protein 676 
DNAJC3                0.005   DnaJ (Hsp40) homolog, subfamily C, member 3 
LOC100292052          0.005   PREDICTED: similar to hCG1773661 
LOC100287226          0.005   PREDICTED: similar to hCG1773661 
LOC100287226          0.005   PREDICTED: hypothetical protein XP_002343677 
MYO5A                 0.005   myosin VA isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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