Search of human proteins with 70780366

Search of human proteins with 70780366

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|70780366 ankyrin 1 isoform 5 [Homo sapiens]
         (155 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|70780366 ankyrin 1 isoform 5 [Homo sapiens]                        303   4e-83
gi|215598566 ankyrin 1 isoform 10 [Homo sapiens]                      248   1e-66
gi|70780361 ankyrin 1 isoform 7 [Homo sapiens]                        203   5e-53
gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]                        163   5e-41
gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]                        108   2e-24
gi|70780355 ankyrin 1 isoform 2 [Homo sapiens]                        108   2e-24
gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]                       103   6e-23
gi|70780353 ankyrin 1 isoform 4 [Homo sapiens]                        103   6e-23
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]                        58   3e-09
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]                         58   3e-09
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]                         58   3e-09
gi|5803145 ralA binding protein 1 [Homo sapiens]                       32   0.17 
gi|32698688 citron [Homo sapiens]                                      28   2.4  
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  28   2.4  
gi|146260268 Smith-Magenis syndrome chromosome region, candidate...    28   2.4  
gi|194018501 C-type lectin domain family 12, member B isoform 1 ...    28   2.4  
gi|194018499 C-type lectin domain family 12, member B isoform 2 ...    28   2.4  
gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens]                28   4.1  
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo...    28   4.1  
gi|67906814 Rho GTPase activating protein 19 [Homo sapiens]            28   4.1  
gi|119120915 rhophilin 1 [Homo sapiens]                                28   4.1  
gi|31377581 hypothetical protein LOC124989 [Homo sapiens]              28   4.1  
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       27   5.4  
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       27   5.4  
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        27   5.4  
gi|239756382 PREDICTED: similar to KIAA1920 protein [Homo sapiens]     27   5.4  
gi|20149560 syntaxin 4 [Homo sapiens]                                  27   5.4  
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]             27   7.0  
gi|4826870 nucleobindin 2 [Homo sapiens]                               27   9.2  
gi|148746195 trichohyalin [Homo sapiens]                               27   9.2  

>gi|70780366 ankyrin 1 isoform 5 [Homo sapiens]
          Length = 155

 Score =  303 bits (776), Expect = 4e-83
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60
           MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
Sbjct: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60

Query: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120
           ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
Sbjct: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120

Query: 121 HEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ 155
           HEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
Sbjct: 121 HEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ 155


>gi|215598566 ankyrin 1 isoform 10 [Homo sapiens]
          Length = 156

 Score =  248 bits (633), Expect = 1e-66
 Identities = 127/137 (92%), Positives = 129/137 (94%)

Query: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60
           MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
Sbjct: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60

Query: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120
           ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE
Sbjct: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120

Query: 121 HEEVELRGSGLQPDLIE 137
           HEEV + G    P  +E
Sbjct: 121 HEEVTVEGPLEDPSELE 137


>gi|70780361 ankyrin 1 isoform 7 [Homo sapiens]
          Length = 109

 Score =  203 bits (516), Expect = 5e-53
 Identities = 101/101 (100%), Positives = 101/101 (100%)

Query: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60
           MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET
Sbjct: 1   MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEET 60

Query: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKK 101
           ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKK
Sbjct: 61  ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKK 101


>gi|70780357 ankyrin 1 isoform 3 [Homo sapiens]
          Length = 1880

 Score =  163 bits (413), Expect = 5e-41
 Identities = 88/110 (80%), Positives = 96/110 (87%), Gaps = 7/110 (6%)

Query: 46   KELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 105
            ++ G+ E + + + T  T+VV+      GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK
Sbjct: 1778 RQQGQEEQVQEAKNTF-TQVVQ------GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 1830

Query: 106  VVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ 155
            VVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
Sbjct: 1831 VVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ 1880


>gi|70780359 ankyrin 1 isoform 1 [Homo sapiens]
          Length = 1881

 Score =  108 bits (270), Expect = 2e-24
 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 7/92 (7%)

Query: 46   KELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 105
            ++ G+ E + + + T  T+VV+      GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK
Sbjct: 1778 RQQGQEEQVQEAKNTF-TQVVQ------GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 1830

Query: 106  VVRQIDLSSADAAQEHEEVELRGSGLQPDLIE 137
            VVRQIDLSSADAAQEHEEV + G    P  +E
Sbjct: 1831 VVRQIDLSSADAAQEHEEVTVEGPLEDPSELE 1862


>gi|70780355 ankyrin 1 isoform 2 [Homo sapiens]
          Length = 1719

 Score =  108 bits (270), Expect = 2e-24
 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 7/92 (7%)

Query: 46   KELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 105
            ++ G+ E + + + T  T+VV+      GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK
Sbjct: 1616 RQQGQEEQVQEAKNTF-TQVVQ------GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 1668

Query: 106  VVRQIDLSSADAAQEHEEVELRGSGLQPDLIE 137
            VVRQIDLSSADAAQEHEEV + G    P  +E
Sbjct: 1669 VVRQIDLSSADAAQEHEEVTVEGPLEDPSELE 1700


>gi|215598574 ankyrin 1 isoform 9 [Homo sapiens]
          Length = 1897

 Score =  103 bits (257), Expect = 6e-23
 Identities = 56/78 (71%), Positives = 64/78 (82%), Gaps = 7/78 (8%)

Query: 46   KELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 105
            ++ G+ E + + + T  T+VV+      GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK
Sbjct: 1819 RQQGQEEQVQEAKNTF-TQVVQ------GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 1871

Query: 106  VVRQIDLSSADAAQEHEE 123
            VVRQIDLSSADAAQEHEE
Sbjct: 1872 VVRQIDLSSADAAQEHEE 1889


>gi|70780353 ankyrin 1 isoform 4 [Homo sapiens]
          Length = 1856

 Score =  103 bits (257), Expect = 6e-23
 Identities = 56/78 (71%), Positives = 64/78 (82%), Gaps = 7/78 (8%)

Query: 46   KELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 105
            ++ G+ E + + + T  T+VV+      GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK
Sbjct: 1778 RQQGQEEQVQEAKNTF-TQVVQ------GNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRK 1830

Query: 106  VVRQIDLSSADAAQEHEE 123
            VVRQIDLSSADAAQEHEE
Sbjct: 1831 VVRQIDLSSADAAQEHEE 1848


>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
          Length = 1863

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 55   SDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSS 114
            +D++     R+     F KG++   IP E VTEE++ DE G+ V KK+ RK++R+   S 
Sbjct: 1758 ADNQPETCERLDEDAAFEKGDDMPEIPPETVTEEEYIDEHGHTVVKKVTRKIIRRYVSSE 1817

Query: 115  ADAAQEHEEVELRGSGLQP-DLIEGRKGAQIVKRASLK 151
                 E EE+ ++G   +P ++ EG   ++++KR  LK
Sbjct: 1818 ---GTEKEEIMVQGMPQEPVNIEEGDGYSKVIKRVVLK 1852



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 61   ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120
            ++ +++RR V  +G E + I  + + +E    E+G+  + K+I++VV + D   ++   E
Sbjct: 1805 VTRKIIRRYVSSEGTEKEEIMVQGMPQEPVNIEEGDGYS-KVIKRVVLKSDTEQSEDNNE 1863


>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
          Length = 1872

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 55   SDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSS 114
            +D++     R+     F KG++   IP E VTEE++ DE G+ V KK+ RK++R+   S 
Sbjct: 1767 ADNQPETCERLDEDAAFEKGDDMPEIPPETVTEEEYIDEHGHTVVKKVTRKIIRRYVSSE 1826

Query: 115  ADAAQEHEEVELRGSGLQP-DLIEGRKGAQIVKRASLK 151
                 E EE+ ++G   +P ++ EG   ++++KR  LK
Sbjct: 1827 ---GTEKEEIMVQGMPQEPVNIEEGDGYSKVIKRVVLK 1861



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 61   ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120
            ++ +++RR V  +G E + I  + + +E    E+G+  + K+I++VV + D   ++   E
Sbjct: 1814 VTRKIIRRYVSSEGTEKEEIMVQGMPQEPVNIEEGDGYS-KVIKRVVLKSDTEQSEDNNE 1872


>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
          Length = 3957

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 55   SDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSS 114
            +D++     R+     F KG++   IP E VTEE++ DE G+ V KK+ RK++R+   S 
Sbjct: 3852 ADNQPETCERLDEDAAFEKGDDMPEIPPETVTEEEYIDEHGHTVVKKVTRKIIRRYVSSE 3911

Query: 115  ADAAQEHEEVELRGSGLQP-DLIEGRKGAQIVKRASLK 151
                 E EE+ ++G   +P ++ EG   ++++KR  LK
Sbjct: 3912 ---GTEKEEIMVQGMPQEPVNIEEGDGYSKVIKRVVLK 3946



 Score = 27.3 bits (59), Expect = 5.4
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 61   ISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQE 120
            ++ +++RR V  +G E + I  + + +E    E+G+  + K+I++VV + D   ++   E
Sbjct: 3899 VTRKIIRRYVSSEGTEKEEIMVQGMPQEPVNIEEGDGYS-KVIKRVVLKSDTEQSEDNNE 3957


>gi|5803145 ralA binding protein 1 [Homo sapiens]
          Length = 655

 Score = 32.3 bits (72), Expect = 0.17
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 38  KHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNI 97
           +H   E ++   ESE  S+DEE +    +      + NE   I    + +    +E+  I
Sbjct: 529 QHGRSETEEYSSESESESEDEEELQ---IILEDLQRQNEELEIKNNHLNQA-IHEEREAI 584

Query: 98  VTKKIIRKVVRQIDLSSADAAQEHEEVELRGSGLQP 133
           +  ++  ++++     +   AQE EE E RG  +QP
Sbjct: 585 IELRVQLRLLQMQRAKAEQQAQEDEEPEWRGGAVQP 620


>gi|32698688 citron [Homo sapiens]
          Length = 2027

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 17/107 (15%)

Query: 48  LGESEGL-SDDEETISTRVVRRRVFLKGNEFQNIPGE-QVTEEQFTDEQGNIVTKKIIRK 105
           LG SE + S  +    T  + +++ +K  E Q+   +    E++ T         ++ R+
Sbjct: 428 LGRSESVVSGLDSPAKTSSMEKKLLIKSKELQDSQDKCHKMEQEMT---------RLHRR 478

Query: 106 VVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKRASLKR 152
           V      S  +A    +EVEL+ S  Q  L+E      I + +SLKR
Sbjct: 479 V------SEVEAVLSQKEVELKASETQRSLLEQDLATYITECSSLKR 519


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 82  GEQVTEEQFTDEQGNIVTKKIIRKVVR-QIDLSSADAAQEHEEVELRGSGLQPDLIEGRK 140
           GE+ +EE+    +G    K +++K    +  +S   A +E EE E          +EG K
Sbjct: 156 GEESSEEEEKGYKGKTRKKPVVKKQAPGKASVSRKQAREESEESEAEPVQRTAKKVEGNK 215

Query: 141 GAQIVKRA 148
           G + +K +
Sbjct: 216 GTKSLKES 223


>gi|146260268 Smith-Magenis syndrome chromosome region, candidate 8
           [Homo sapiens]
          Length = 937

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 19  LVSCQNVMHIVRGSLCFVL-KHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEF 77
           L    ++ H+ RG LC++L   I + L K+   +  L +D   +  R+V ++  +     
Sbjct: 335 LAQLSHIEHMFRGDLCYLLTSQIDRALLKQQHITNFLFEDFVEVDDRMVEKQESIPSKPS 394

Query: 78  QNIPGEQVTEE 88
           Q+ P     EE
Sbjct: 395 QDRPPSSSLEE 405


>gi|194018501 C-type lectin domain family 12, member B isoform 1
           [Homo sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 3   TFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELD---KELGESEGLSDDEE 59
           T    LL+ LV L    +   N ++     L  + K I Q+ D   ++LG S  LS +EE
Sbjct: 48  TLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEE 107

Query: 60  TISTRV 65
            + +++
Sbjct: 108 FLKSQI 113


>gi|194018499 C-type lectin domain family 12, member B isoform 2
           [Homo sapiens]
          Length = 232

 Score = 28.5 bits (62), Expect = 2.4
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 3   TFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELD---KELGESEGLSDDEE 59
           T    LL+ LV L    +   N ++     L  + K I Q+ D   ++LG S  LS +EE
Sbjct: 48  TLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDNLSQQLGNSNNLSMEEE 107

Query: 60  TISTRV 65
            + +++
Sbjct: 108 FLKSQI 113


>gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens]
          Length = 501

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 86  TEEQFTDEQGNIVTKKIIRKVVRQ 109
           TEE++ D  GN+V KK    + RQ
Sbjct: 475 TEEEYEDSSGNVVNKKTYEDLKRQ 498


>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
            sapiens]
          Length = 1938

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 30/145 (20%)

Query: 36   VLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVT--------E 87
            VL    Q+LD+   E E    +  ++ST + + R     N ++ +  +  T        +
Sbjct: 1456 VLAEWKQKLDESQAELEAAQKESRSLSTELFKMR-----NAYEEVVDQLETLRRENKNLQ 1510

Query: 88   EQFTDEQGNIV-----------TKKII--RKVVRQIDLSSADAAQEHEEVELRGSGLQPD 134
            E+ +D    I            TKK++   K   Q+ L   + + EHEE ++    L+  
Sbjct: 1511 EEISDLTEQIAETGKNLQEAEKTKKLVEQEKSDLQVALEEVEGSLEHEESKILRVQLELS 1570

Query: 135  LIEGRKGAQIVKR----ASLKRGKQ 155
             ++     +++++      LKR  Q
Sbjct: 1571 QVKSELDRKVIEKDEEIEQLKRNSQ 1595


>gi|67906814 Rho GTPase activating protein 19 [Homo sapiens]
          Length = 494

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 88  EQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVELRGSG 130
           E+   E+  I T+ ++  + R IDL   + AQ   EV+L+  G
Sbjct: 47  EKLRHEKPEIFTELVVSNITRLIDLPGTELAQLMGEVDLKLPG 89


>gi|119120915 rhophilin 1 [Homo sapiens]
          Length = 670

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 18/55 (32%), Positives = 24/55 (43%)

Query: 19 LVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLK 73
          L  C ++  I  G L      IHQ++DKEL    G  +     S   VR  V L+
Sbjct: 19 LQGCDSLTQIQCGQLQSRRAQIHQQIDKELQMRTGAENLYRATSNNRVRETVALE 73


>gi|31377581 hypothetical protein LOC124989 [Homo sapiens]
          Length = 973

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 88  EQFTDEQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKR 147
           E  T ++G+ V  +   KVVR  ++  A   +E +EV L    L+ D+I G+     ++ 
Sbjct: 643 ELVTVDEGDKVQFEEFAKVVR--NMRDAARLEELQEVVLAADLLEGDMIAGKNLEDFLRN 700

Query: 148 ASLKRGKQ 155
             +K  K+
Sbjct: 701 VGIKSPKE 708


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 12/101 (11%)

Query: 37  LKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTD---- 92
           LK   + L +E+G  +     + +I+++V   +  LKG E Q    + V EE+  D    
Sbjct: 834 LKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANT 893

Query: 93  -------EQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVEL 126
                  ++ N   K  +++V  Q +L  A +A + EE+E+
Sbjct: 894 GKWLQDLQEENESLKAHVQEVA-QHNLKEASSASQFEELEI 933


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 12/101 (11%)

Query: 37  LKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTD---- 92
           LK   + L +E+G  +     + +I+++V   +  LKG E Q    + V EE+  D    
Sbjct: 834 LKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANT 893

Query: 93  -------EQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVEL 126
                  ++ N   K  +++V  Q +L  A +A + EE+E+
Sbjct: 894 GKWLQDLQEENESLKAHVQEVA-QHNLKEASSASQFEELEI 933


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 12/101 (11%)

Query: 37  LKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTD---- 92
           LK   + L +E+G  +     + +I+++V   +  LKG E Q    + V EE+  D    
Sbjct: 834 LKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANT 893

Query: 93  -------EQGNIVTKKIIRKVVRQIDLSSADAAQEHEEVEL 126
                  ++ N   K  +++V  Q +L  A +A + EE+E+
Sbjct: 894 GKWLQDLQEENESLKAHVQEVA-QHNLKEASSASQFEELEI 933


>gi|239756382 PREDICTED: similar to KIAA1920 protein [Homo sapiens]
          Length = 483

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 27  HIV--RGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNIPGEQ 84
           HI+   GSL  +L+H H+ L  E+ ++  L    E ++ +++     L   E ++ PGE 
Sbjct: 71  HIIFPHGSLMVILEHTHKPLGPEVLQAYDLDSTCEGLAFQLLGTPSGLP-VEHRDQPGEP 129

Query: 85  VTE 87
           VTE
Sbjct: 130 VTE 132


>gi|20149560 syntaxin 4 [Homo sapiens]
          Length = 297

 Score = 27.3 bits (59), Expect = 5.4
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 53  GLSDDEETISTRVVRRRVFLKGNEFQNIPGEQVT-------EEQFTDEQGNIVTKKIIRK 105
           G  D+E     R +R+ +   GN+ Q +  +QVT       EE    E  N+  +  I++
Sbjct: 35  GSPDEEFFHKVRTIRQTIVKLGNKVQELEKQQVTILATPLPEESMKQELQNL--RDEIKQ 92

Query: 106 VVRQIDLSSADAAQEHEEVE 125
           + R+I L       + EE +
Sbjct: 93  LGREIRLQLKAIEPQKEEAD 112


>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
          Length = 794

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 45  DKELGESEGLSDDEE----TISTRVVRRRVFLKGNEFQNIPGEQVTEEQFTDEQGNIVTK 100
           D+ L     L+ DE     T + RVV  ++FL   E +     Q  E+    ++G  VT+
Sbjct: 30  DESLDSKTTLTSDESVKDHTTAGRVVAGQIFLDSEESELESSIQEEEDSLKSQEGESVTE 89

Query: 101 KI 102
            I
Sbjct: 90  DI 91


>gi|4826870 nucleobindin 2 [Homo sapiens]
          Length = 420

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 22/113 (19%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 45  DKELGESEGLSDDEETISTRVVRRRVFLKGNEFQNI----PGEQVTEEQFTDEQGNIVTK 100
           ++ L   E + ++ +T   R+V    FLK  E +        E + ++QF  E+     +
Sbjct: 292 EERLRMREHVMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETLDQQQFFTEEELKEYE 351

Query: 101 KIIRKVVRQIDLSSADAAQEHEEVELRGSGLQPDLIEGRKGAQIVKRASLKRG 153
            II     ++   + +  ++ EE++ +   L+   +E  +  Q +++  L++G
Sbjct: 352 NIIALQENELKKKADELQKQKEELQRQHDQLEAQKLEYHQVIQQMEQKKLQQG 404


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 42  QELDKELGESEGLSDDEETISTRVVRRR---VFLKGNEFQNIPGEQVTEEQFTDEQGN 96
           QE ++EL E E  S+ +E +  R  +RR   ++ +  E+Q     +  EEQ    +G+
Sbjct: 142 QEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGH 199


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,219,171
Number of Sequences: 37866
Number of extensions: 210352
Number of successful extensions: 724
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 698
Number of HSP's gapped (non-prelim): 40
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.