Guide to the Human Genome
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Search of human proteins with 7019319

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7019319 activator of basal transcription 1 [Homo sapiens]
         (272 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7019319 activator of basal transcription 1 [Homo sapiens]          546   e-156
gi|222352111 MKI67 interacting nucleolar phosphoprotein [Homo sa...    36   0.031
gi|21361517 UBX domain protein 1 [Homo sapiens]                        34   0.12 
gi|4503257 death-domain associated protein isoform a [Homo sapiens]    34   0.16 
gi|215422388 death-domain associated protein isoform a [Homo sap...    34   0.16 
gi|215422366 death-domain associated protein isoform b [Homo sap...    34   0.16 
gi|17975763 myelin transcription factor 1 [Homo sapiens]               34   0.16 
gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c ...    33   0.20 
gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b p...    33   0.20 
gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a ...    33   0.20 
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]      33   0.27 
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]      33   0.27 
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]      33   0.27 
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]       33   0.27 
gi|218156328 glycine receptor, alpha 4 precursor [Homo sapiens]        33   0.27 
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        33   0.35 
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]      33   0.35 
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]        33   0.35 
gi|30089948 protein phosphatase 1E [Homo sapiens]                      32   0.59 
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo...    32   0.59 
gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]              32   0.59 
gi|148746195 trichohyalin [Homo sapiens]                               32   0.77 
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    32   0.77 
gi|21735415 centromere protein B [Homo sapiens]                        31   1.0  
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]     31   1.0  
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]     31   1.0  
gi|4503827 frizzled 2 [Homo sapiens]                                   31   1.0  
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]     31   1.0  
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    31   1.0  
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    31   1.0  

>gi|7019319 activator of basal transcription 1 [Homo sapiens]
          Length = 272

 Score =  546 bits (1408), Expect = e-156
 Identities = 272/272 (100%), Positives = 272/272 (100%)

Query: 1   MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPL 60
           MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPL
Sbjct: 1   MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPL 60

Query: 61  HVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKR 120
           HVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKR
Sbjct: 61  HVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKR 120

Query: 121 VAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKR 180
           VAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKR
Sbjct: 121 VAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKR 180

Query: 181 ETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRARKAARPGGRERARLATAQ 240
           ETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRARKAARPGGRERARLATAQ
Sbjct: 181 ETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRARKAARPGGRERARLATAQ 240

Query: 241 DKARSNKGLLARIFGAPPPSESMEGPSLVRDS 272
           DKARSNKGLLARIFGAPPPSESMEGPSLVRDS
Sbjct: 241 DKARSNKGLLARIFGAPPPSESMEGPSLVRDS 272


>gi|222352111 MKI67 interacting nucleolar phosphoprotein [Homo
           sapiens]
          Length = 293

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 26/120 (21%)

Query: 22  TLDAEEEQEESEEAACGSKK--------RVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVG 73
           +L+ +E+ E  +E A   K+        ++ PG+VY+ H+P       + +  S +G V 
Sbjct: 13  SLNPQEDVEFQKEVAQVRKRITQRKKQEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVT 72

Query: 74  RVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGAR 133
           R       R  R K+       G  + Y       +VEF  + +AK VA +++N   G R
Sbjct: 73  RF------RLSRSKRT------GNSKGY------AFVEFESEDVAKIVAETMNNYLFGER 114


>gi|21361517 UBX domain protein 1 [Homo sapiens]
          Length = 312

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 15/113 (13%)

Query: 163 ERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRA 222
           ERQ + +R+   VAQ +RE +      ER +R         R  G    A R   QE   
Sbjct: 90  ERQEQTKRMLELVAQKQRERE------EREEREALERERQRRRQGQELSAARQRLQEDEM 143

Query: 223 RKAARPGGRERARLATAQDKARS----NKGLLARIFGA-----PPPSESMEGP 266
           R+AA    RE+A    A+ + R     +K   A+ +G      PPP     GP
Sbjct: 144 RRAAEERRREKAEELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGP 196


>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
          Length = 740

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 2   EAEESEKAAT---EQEPLEGTEQTLDAEEEQEESEEAACG 38
           E EE E+ AT   E+E LE  ++  + +EE++E EEAA G
Sbjct: 450 EEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAG 489


>gi|215422388 death-domain associated protein isoform a [Homo
           sapiens]
          Length = 740

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 2   EAEESEKAAT---EQEPLEGTEQTLDAEEEQEESEEAACG 38
           E EE E+ AT   E+E LE  ++  + +EE++E EEAA G
Sbjct: 450 EEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAG 489


>gi|215422366 death-domain associated protein isoform b [Homo
           sapiens]
          Length = 752

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 2   EAEESEKAAT---EQEPLEGTEQTLDAEEEQEESEEAACG 38
           E EE E+ AT   E+E LE  ++  + +EE++E EEAA G
Sbjct: 462 EEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAG 501


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVY 49
           E EE E+   E+E  E  E+  + EEE+EE EE     ++   P +++
Sbjct: 266 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIF 313



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 265 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E E+ E+   E+E  E  E+  + EEE+EE EE
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEE 292



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E E  E  E+  + EEE+EE EE
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 295



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           + EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 261 DEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 293



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E++  E  E+  + EEE+EE EE
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE 294



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   ++E  E  E+  + EEE+EE EE
Sbjct: 264 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E +E E+   E+E  +  E+  + EEE+EE EE
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEE 291


>gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c
           precursor [Homo sapiens]
          Length = 916

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 17/134 (12%)

Query: 75  VFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARR 134
           VFFQAE+    +KKK   +   ++   T  + E   E+R  R   R+  +  N P+    
Sbjct: 405 VFFQAEEE--EKKKKEGKSRNKRQSKSTASFEELCSEYRKSRKNGRLFCTRENDPIQGPD 462

Query: 135 RSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQR 194
                        +H  T S      AF +Q  R R +A+   AK     +   V  G  
Sbjct: 463 GK-----------MHGNTCSMCE---AFFQQEERARAKAKREAAKEICSEFRDQVRNGTL 508

Query: 195 FLAADGDPAR-PDG 207
               + +P R PDG
Sbjct: 509 ICTREHNPVRGPDG 522


>gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b
           precursor [Homo sapiens]
          Length = 1064

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 17/134 (12%)

Query: 75  VFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARR 134
           VFFQAE+    +KKK   +   ++   T  + E   E+R  R   R+  +  N P+    
Sbjct: 405 VFFQAEEE--EKKKKEGKSRNKRQSKSTASFEELCSEYRKSRKNGRLFCTRENDPIQGPD 462

Query: 135 RSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQR 194
                        +H  T S      AF +Q  R R +A+   AK     +   V  G  
Sbjct: 463 GK-----------MHGNTCSMCE---AFFQQEERARAKAKREAAKEICSEFRDQVRNGTL 508

Query: 195 FLAADGDPAR-PDG 207
               + +P R PDG
Sbjct: 509 ICTREHNPVRGPDG 522


>gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a
           precursor [Homo sapiens]
          Length = 1094

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 17/134 (12%)

Query: 75  VFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARR 134
           VFFQAE+    +KKK   +   ++   T  + E   E+R  R   R+  +  N P+    
Sbjct: 405 VFFQAEEE--EKKKKEGKSRNKRQSKSTASFEELCSEYRKSRKNGRLFCTRENDPIQGPD 462

Query: 135 RSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQR 194
                        +H  T S      AF +Q  R R +A+   AK     +   V  G  
Sbjct: 463 GK-----------MHGNTCSMCE---AFFQQEERARAKAKREAAKEICSEFRDQVRNGTL 508

Query: 195 FLAADGDPAR-PDG 207
               + +P R PDG
Sbjct: 509 ICTREHNPVRGPDG 522


>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
          Length = 450

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 26/133 (19%)

Query: 4   EESEKAATEQEPL--EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLH 61
           + S   +T+   L  EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   
Sbjct: 141 QSSNSPSTQNGSLTTEGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPD 196

Query: 62  VRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRV 121
           +R +   +G++       E  F  R  K                  G+V F +   A R 
Sbjct: 197 LRQMFGQFGKI----LDVEIIFNERGSKGF----------------GFVTFENSADADRA 236

Query: 122 AASLHNTPMGARR 134
              LH T +  R+
Sbjct: 237 REKLHGTVVEGRK 249


>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
          Length = 370

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 26/133 (19%)

Query: 4   EESEKAATEQEPL--EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLH 61
           + S   +T+   L  EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   
Sbjct: 71  QSSNSPSTQNGSLTTEGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPD 126

Query: 62  VRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRV 121
           +R +   +G++       E  F  R  K                  G+V F +   A R 
Sbjct: 127 LRQMFGQFGKI----LDVEIIFNERGSKGF----------------GFVTFENSADADRA 166

Query: 122 AASLHNTPMGARR 134
              LH T +  R+
Sbjct: 167 REKLHGTVVEGRK 179


>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
          Length = 376

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 26/133 (19%)

Query: 4   EESEKAATEQEPL--EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLH 61
           + S   +T+   L  EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   
Sbjct: 71  QSSNSPSTQNGSLTTEGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPD 126

Query: 62  VRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRV 121
           +R +   +G++       E  F  R  K                  G+V F +   A R 
Sbjct: 127 LRQMFGQFGKI----LDVEIIFNERGSKGF----------------GFVTFENSADADRA 166

Query: 122 AASLHNTPMGARR 134
              LH T +  R+
Sbjct: 167 REKLHGTVVEGRK 179


>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
          Length = 380

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 26/133 (19%)

Query: 4   EESEKAATEQEPL--EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLH 61
           + S   +T+   L  EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   
Sbjct: 71  QSSNSPSTQNGSLTTEGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPD 126

Query: 62  VRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRV 121
           +R +   +G++       E  F  R  K                  G+V F +   A R 
Sbjct: 127 LRQMFGQFGKI----LDVEIIFNERGSKGF----------------GFVTFENSADADRA 166

Query: 122 AASLHNTPMGARR 134
              LH T +  R+
Sbjct: 167 REKLHGTVVEGRK 179


>gi|218156328 glycine receptor, alpha 4 precursor [Homo sapiens]
          Length = 417

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 158 EHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTE 217
           E +   R+ RRQRL  ++ Q  R   FY +    G    A DG P   +GS  ++ +P  
Sbjct: 348 EFIRLRRRQRRQRLEEDIIQESR---FYFRGYGLGHCLQARDGGPM--EGSGIYSPQPPA 402

Query: 218 QELRARKAAR 227
             LR  +  R
Sbjct: 403 PLLREGETTR 412


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAA 36
           E +E E+   E+E  E  E+  + EEE+EE EEAA
Sbjct: 739 EEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAA 773



 Score = 30.8 bits (68), Expect = 1.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAA 36
           E EE E+   E+E  E  E+  + EEE+EE E AA
Sbjct: 740 EDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAA 774



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 734 EEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEE 766



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E    E+E  E  E+  + EEE+EE EE
Sbjct: 735 EEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEE 767



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E E  E  E+  + EEE+EE EE
Sbjct: 737 EEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEE 769



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGS 39
           E E+ E+   ++E  E  E+  + EEE+EE EE A  +
Sbjct: 738 EEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAA 775



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E  +  E+  + EEE+EE EE
Sbjct: 733 EEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEE 765



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE ++   E++  E  E+  + EEE+EE EE
Sbjct: 736 EEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEE 768



 Score = 28.1 bits (61), Expect = 8.5
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 4   EESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHI 53
           EE E+   E+E  E  E+  + EEE+EE EE     ++      V LG +
Sbjct: 734 EEEEEEEDEEEEEEDEEE--EEEEEEEEEEEEEEEEEEEEAAAAVALGEV 781


>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
          Length = 451

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 24/118 (20%)

Query: 17  EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVF 76
           EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   +R +   +G++    
Sbjct: 157 EGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI---- 208

Query: 77  FQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARR 134
              E  F  R  K                  G+V F +   A R    LH T +  R+
Sbjct: 209 LDVEIIFNERGSKGF----------------GFVTFENSADADRAREKLHGTVVEGRK 250


>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
          Length = 367

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 24/118 (20%)

Query: 17  EGTEQTLDAEEEQEESEEAACGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVF 76
           EG  QT D ++ Q +S E    S+ +  P  +++ +IP RFR   +R +   +G++    
Sbjct: 87  EGGAQT-DGQQSQTQSSE---NSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKI---- 138

Query: 77  FQAEDRFVRRKKKAAAAAGGKKRSYTKDYTEGWVEFRDKRIAKRVAASLHNTPMGARR 134
              E  F  R  K                  G+V F +   A R    LH T +  R+
Sbjct: 139 LDVEIIFNERGSKGF----------------GFVTFENSADADRAREKLHGTVVEGRK 180


>gi|30089948 protein phosphatase 1E [Homo sapiens]
          Length = 755

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 37/135 (27%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 6   SEKAATEQEPLEGTEQTLDAEEEQEESEEAACG-SKKRVVPGIVYLGHIPPRFRPLHVR- 63
           +E+   EQ+P    E  ++ EEE+E +  AA       V P    L  +PP  RPL  R 
Sbjct: 76  TEEGDQEQDPEPEEEAAVEGEEEEEGAATAAAAPGHSAVPPPPPQLPPLPPLPRPLSERI 135

Query: 64  NLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTK------------DYTEGWVE 111
                 GE   +  Q   ++      AAA A        +            D TEG VE
Sbjct: 136 TREEVEGESLDLCLQQLYKYNCPSFLAAALARATSDEVLQSDLSAHYIPKETDGTEGTVE 195

Query: 112 FRDKRIAKRVAASLH 126
               ++A+ V + LH
Sbjct: 196 IETVKLARSVFSKLH 210


>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
           sapiens]
          Length = 1199

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 1   MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVP 45
           ++ +++E   TE+E ++G E     +E +EE  ++ C S   V P
Sbjct: 501 LQPDQAETEDTEEELVDGLEDCCSRDENEEEEGDSECSSLSAVSP 545


>gi|4506411 Ran GTPase activating protein 1 [Homo sapiens]
          Length = 587

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSK 40
           E EE E+ A E+E  +  E+  + EEE+EE ++   G K
Sbjct: 368 EGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEK 406



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           + EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 362 DEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEE 394



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E     E+  D EEE+EE EE
Sbjct: 361 EDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEE 393



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E    E+E  E  E+  + EEE+EE EE
Sbjct: 363 EEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEE 395



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           + +E E+   E+E  E  E+  + EEE+EE EE
Sbjct: 360 DEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEE 392



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E E  E  ++  + EEE+EE EE
Sbjct: 365 EEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEE 397


>gi|148746195 trichohyalin [Homo sapiens]
          Length = 1943

 Score = 31.6 bits (70), Expect = 0.77
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 163 ERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRA 222
           +++ +R+R   E  + +RE++   Q  ER  R      +  R D +W +      +  R 
Sbjct: 725 KQEGQRRRQEQEEKRRRRESELQWQEEERAHR--QQQEEEQRRDFTWQWQAEEKSERGRQ 782

Query: 223 RKAARPGGRE-RARLATAQDKARSNKGLL 250
           R +ARP  RE R R   A+++ +  +  L
Sbjct: 783 RLSARPPLREQRERQLRAEERQQREQRFL 811


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 31.6 bits (70), Expect = 0.77
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           ++EE E+   EQE  E  E+  + EEE+EE EE
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEE 890


>gi|21735415 centromere protein B [Homo sapiens]
          Length = 599

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
           E EE E+   E+E  EG E+  + EEE+EE  E
Sbjct: 406 EEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGE 438


>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
          Length = 770

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 3   AEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGS 39
           +EE E+   E+E    T +  + EEE+EE EE   GS
Sbjct: 278 SEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS 314



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKK 41
           E EE E+   E+E     E   + EEE+EE EE    S++
Sbjct: 279 EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEE 318


>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
          Length = 780

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 3   AEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGS 39
           +EE E+   E+E    T +  + EEE+EE EE   GS
Sbjct: 288 SEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS 324



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKK 41
           E EE E+   E+E     E   + EEE+EE EE    S++
Sbjct: 289 EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEE 328


>gi|4503827 frizzled 2 [Homo sapiens]
          Length = 565

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 185 YLQSVERGQRFLAADGDPARPDGSWTFAQRPT 216
           YL     G+R  AA  +PARPDGS  F+Q  T
Sbjct: 210 YLSYKFLGERDCAAPCEPARPDGSMFFSQEET 241


>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
          Length = 543

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSK 40
           EAEE EK   E E  E  E+   A+EE EE++E   G +
Sbjct: 475 EAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGE 513



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 4   EESEKAATEQEPLEGT--EQTLDAEEEQEESEEA 35
           EESE+A  E+E  EG   E+T +AEEE+++ E A
Sbjct: 500 EESEEAKEEEEGGEGEEGEETKEAEEEEKKVEGA 533


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
            [Homo sapiens]
          Length = 2073

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 3    AEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
            +EE E+   E+E  E  E+  D EEE+EE EE
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEE 1100



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)

Query: 2    EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
            E EE E+   E+E  E  E+  + EEE+EE EE
Sbjct: 1070 EEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEE 1102



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 2    EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
            E EE E    E+E  E  E   + EEE+EE EE
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEE 1103



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 2    EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRV 43
            E EE ++   E+E  E  ++  + EEE+EE EE    S  R+
Sbjct: 1072 EEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRL 1113



 Score = 28.1 bits (61), Expect = 8.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 2    EAEESEKAATEQEPLEGTEQTLDAEEEQEESEE 34
            E+ E E+   ++E  E  E+  + EEE+EE EE
Sbjct: 1067 ESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEE 1099


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 3   AEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGS 39
           +EE E+   E+E    T +  + EEE+EE EE   GS
Sbjct: 279 SEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGS 315



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 2   EAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKK 41
           E EE E+   E+E     E   + EEE+EE EE    S++
Sbjct: 280 EEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEE 319


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,113,299
Number of Sequences: 37866
Number of extensions: 505676
Number of successful extensions: 4698
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 3845
Number of HSP's gapped (non-prelim): 670
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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