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Search of human proteins with 13787215
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13787215 sirtuin 5 isoform 2 [Homo sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13787215 sirtuin 5 isoform 2 [Homo sapiens] 611 e-175
gi|6912664 sirtuin 5 isoform 1 [Homo sapiens] 587 e-168
gi|6912662 sirtuin 4 [Homo sapiens] 104 8e-23
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 91 9e-19
gi|6912660 sirtuin 3 isoform a [Homo sapiens] 84 1e-16
gi|63054862 sirtuin 3 isoform b [Homo sapiens] 80 2e-15
gi|13775600 sirtuin 2 isoform 1 [Homo sapiens] 68 1e-11
gi|13775602 sirtuin 2 isoform 2 [Homo sapiens] 68 1e-11
gi|215982798 sirtuin 1 isoform b [Homo sapiens] 67 1e-11
gi|7706710 sirtuin 6 [Homo sapiens] 59 5e-09
gi|7706712 sirtuin 7 [Homo sapiens] 55 7e-08
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 31 1.2
gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapi... 30 2.0
gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapi... 30 2.0
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 30 2.6
gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain... 29 5.8
gi|10047144 sal-like 4 [Homo sapiens] 28 7.5
gi|109452595 zinc finger protein 205 [Homo sapiens] 28 7.5
gi|109452593 zinc finger protein 205 [Homo sapiens] 28 7.5
gi|169218225 PREDICTED: similar to U5 snRNP-specific 200kD prote... 28 9.8
gi|40217847 activating signal cointegrator 1 complex subunit 3-l... 28 9.8
>gi|13787215 sirtuin 5 isoform 2 [Homo sapiens]
Length = 299
Score = 611 bits (1576), Expect = e-175
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG 60
MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG
Sbjct: 1 MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG 60
Query: 61 VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA 120
VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA
Sbjct: 61 VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA 120
Query: 121 IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI 180
IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI
Sbjct: 121 IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI 180
Query: 181 CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA 240
CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA
Sbjct: 181 CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA 240
Query: 241 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFSHLISISSLIIIKN 299
HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFSHLISISSLIIIKN
Sbjct: 241 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFSHLISISSLIIIKN 299
>gi|6912664 sirtuin 5 isoform 1 [Homo sapiens]
Length = 310
Score = 587 bits (1513), Expect = e-168
Identities = 285/285 (100%), Positives = 285/285 (100%)
Query: 1 MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG 60
MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG
Sbjct: 1 MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAG 60
Query: 61 VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA 120
VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA
Sbjct: 61 VSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRA 120
Query: 121 IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI 180
IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI
Sbjct: 121 IAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPI 180
Query: 181 CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA 240
CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA
Sbjct: 181 CPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELA 240
Query: 241 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRF 285
HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRF
Sbjct: 241 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRF 285
>gi|6912662 sirtuin 4 [Homo sapiens]
Length = 314
Score = 104 bits (260), Expect = 8e-23
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 27/285 (9%)
Query: 8 PSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAGVSAESGV 67
PS+ S+ GL PAS + + ++F +K +++++GAG+S ESG+
Sbjct: 20 PSQPCSKASIGLFVPASP--------PLDPEKVKELQRFITLSKRLLVMTGAGISTESGI 71
Query: 68 PTFRGAG-GYWRKWQAQDLATPLAFAHNP--SRVWEFYHYRREVMGSKEPNAGHRAIAEC 124
P +R G + + + + P R W S +PN H A++
Sbjct: 72 PDYRSEKVGLYARTDRRPIQHGDFVRSAPIRQRYWARNFVGWPQFSSHQPNPAHWALSTW 131
Query: 125 ETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSC------GVVAENYK- 177
E K G+ ++TQN+D LH KAG++ L E+HG + + C C GV+ E ++
Sbjct: 132 E----KLGKLYWLVTQNVDALHTKAGSRRLTELHGCMDRVLCLDCGEQTPRGVLQERFQV 187
Query: 178 -SPICPALSGKGAPEPGT--QDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEE 234
+P A + AP+ + + ++P C + CGG L+P VV+FG+ ++P ++
Sbjct: 188 LNPTWSAEAHGLAPDGDVFLSEEQVRSFQVPTCVQ--CGGHLKPDVVFFGDTVNPDKVDF 245
Query: 235 VDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT 279
V + + D LVVG+S VY F + +P+A N T
Sbjct: 246 VHKRVKEADSLLVVGSSLQVYSGYRFILTAWEKKLPIAILNIGPT 290
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 91.3 bits (225), Expect = 9e-19
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 32 KMARPSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQ--DLATPL 89
K + +++ D K + K I++++GAGVS G+P FR G + + DL P
Sbjct: 235 KKRKDINTIEDAVKLLQECKKIIVLTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQ 294
Query: 90 A------FAHNPSRVWEFYHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNI 142
A F +P F+ + +E+ G +P+ H+ IA + K+G+ + TQNI
Sbjct: 295 AMFDIEYFRKDPR---PFFKFAKEIYPGQFQPSLCHKFIALSD----KEGKLLRNYTQNI 347
Query: 143 DELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVE 202
D L + AG + +++ HGS C C YK C A+ G + V
Sbjct: 348 DTLEQVAGIQRIIQCHGSFATASCLIC-----KYKVD-CEAVRGDIFNQV--------VP 393
Query: 203 KLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAP 262
+ PRC +++P +V+FGENL + + DL +V+G+S V P A+ P
Sbjct: 394 RCPRCPADEPLAIMKPEIVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALI-P 452
Query: 263 QVAARGVPVAEFNTETTPATNRFSHLISISSLII 296
VP N E P + L+ +II
Sbjct: 453 SSIPHEVPQILINREPLPHLHFDVELLGDCDVII 486
>gi|6912660 sirtuin 3 isoform a [Homo sapiens]
Length = 399
Score = 84.3 bits (207), Expect = 1e-16
Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 41/226 (18%)
Query: 51 KHIVIISGAGVSAESGVPTFRGAG-GYWRKWQAQDLATPLA------FAHNPSRVWEFYH 103
+ +V++ GAG+S SG+P FR G G + Q DL P A F HNP F+
Sbjct: 138 QRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPK---PFFT 194
Query: 104 YRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGS 160
+E+ G+ +PN H + L +G + + TQNID L R +G L+E HG+
Sbjct: 195 LAKELYPGNYKPNVTHYFL----RLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGT 250
Query: 161 LFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ-DASIPVEKLPRCEEAGCGGLLRPH 219
CT C P PG A + +++PRC C G+++P
Sbjct: 251 FASATCTVC------------------QRPFPGEDIRADVMADRVPRCPV--CTGVVKPD 290
Query: 220 VVWFGENLDPA-ILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQV 264
+V+FGE L +L VD +A DL L++GTS V P A V
Sbjct: 291 IVFFGEPLPQRFLLHVVDFPMA--DLLLILGTSLEVEPFASLTEAV 334
>gi|63054862 sirtuin 3 isoform b [Homo sapiens]
Length = 257
Score = 80.5 bits (197), Expect = 2e-15
Identities = 72/219 (32%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 58 GAGVSAESGVPTFRGAG-GYWRKWQAQDLATPLA------FAHNPSRVWEFYHYRREVM- 109
GAG+S SG+P FR G G + Q DL P A F HNP F+ +E+
Sbjct: 3 GAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPK---PFFTLAKELYP 59
Query: 110 GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGSLFKTRCT 167
G+ +PN H + L +G + + TQNID L R +G L+E HG+ CT
Sbjct: 60 GNYKPNVTHYFL----RLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCT 115
Query: 168 SCGVVAENYKSPICPALSGKGAPEPGTQ-DASIPVEKLPRCEEAGCGGLLRPHVVWFGEN 226
C P PG A + +++PRC C G+++P +V+FGE
Sbjct: 116 VC------------------QRPFPGEDIRADVMADRVPRCPV--CTGVVKPDIVFFGEP 155
Query: 227 LDPA-ILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQV 264
L +L VD +A DL L++GTS V P A V
Sbjct: 156 LPQRFLLHVVDFPMA--DLLLILGTSLEVEPFASLTEAV 192
>gi|13775600 sirtuin 2 isoform 1 [Homo sapiens]
Length = 389
Score = 67.8 bits (164), Expect = 1e-11
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 49 KAKHIVIISGAGVSAESGVPTFRGAG-GYWRKWQAQDLATPLA------FAHNPSRVWEF 101
+ + ++ + GAG+S +G+P FR G + + L P A F +P F
Sbjct: 75 RCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPE---PF 131
Query: 102 YHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTK--NLLEIH 158
+ +E+ G +P H + L +G + TQNID L R AG + +L+E H
Sbjct: 132 FALAKELYPGQFKPTICHYFMR----LLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAH 187
Query: 159 GSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRP 218
G+ + + C S ++ P+ I E P+CE+ C L++P
Sbjct: 188 GTFYTSHCVSASC---RHEYPL------------SWMKEKIFSEVTPKCED--CQSLVKP 230
Query: 219 HVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTET 278
+V+FGE+L + + DL LV+GTS V P A + A P N E
Sbjct: 231 DIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISK-APLSTPRLLINKEK 289
Query: 279 TPATNRFSHLI 289
++ F +I
Sbjct: 290 AGQSDPFLGMI 300
>gi|13775602 sirtuin 2 isoform 2 [Homo sapiens]
Length = 352
Score = 67.8 bits (164), Expect = 1e-11
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 49 KAKHIVIISGAGVSAESGVPTFRGAG-GYWRKWQAQDLATPLA------FAHNPSRVWEF 101
+ + ++ + GAG+S +G+P FR G + + L P A F +P F
Sbjct: 38 RCRRVICLVGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPE---PF 94
Query: 102 YHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTK--NLLEIH 158
+ +E+ G +P H + L +G + TQNID L R AG + +L+E H
Sbjct: 95 FALAKELYPGQFKPTICHYFMR----LLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAH 150
Query: 159 GSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRP 218
G+ + + C S ++ P+ I E P+CE+ C L++P
Sbjct: 151 GTFYTSHCVSASC---RHEYPL------------SWMKEKIFSEVTPKCED--CQSLVKP 193
Query: 219 HVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTET 278
+V+FGE+L + + DL LV+GTS V P A + A P N E
Sbjct: 194 DIVFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISK-APLSTPRLLINKEK 252
Query: 279 TPATNRFSHLI 289
++ F +I
Sbjct: 253 AGQSDPFLGMI 263
>gi|215982798 sirtuin 1 isoform b [Homo sapiens]
Length = 452
Score = 67.4 bits (163), Expect = 1e-11
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 101 FYHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHG 159
F+ + +E+ G +P+ H+ IA + K+G+ + TQNID L + AG + +++ HG
Sbjct: 14 FFKFAKEIYPGQFQPSLCHKFIALSD----KEGKLLRNYTQNIDTLEQVAGIQRIIQCHG 69
Query: 160 SLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPH 219
S C C YK C A+ G + V + PRC +++P
Sbjct: 70 SFATASCLIC-----KYKVD-CEAVRGDIFNQV--------VPRCPRCPADEPLAIMKPE 115
Query: 220 VVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT 279
+V+FGENL + + DL +V+G+S V P A+ P VP N E
Sbjct: 116 IVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALI-PSSIPHEVPQILINREPL 174
Query: 280 PATNRFSHLISISSLII 296
P + L+ +II
Sbjct: 175 PHLHFDVELLGDCDVII 191
>gi|7706710 sirtuin 6 [Homo sapiens]
Length = 355
Score = 58.9 bits (141), Expect = 5e-09
Identities = 54/243 (22%), Positives = 90/243 (37%), Gaps = 53/243 (21%)
Query: 49 KAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREV 108
++ +V +GAG+S SG+P FRG G W + + LA +R
Sbjct: 43 QSSSVVFHTGAGISTASGIPDFRGPHGVW-TMEERGLAPKFDTTFESAR----------- 90
Query: 109 MGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAG--TKNLLEIHGSLFKTRC 166
P H A+ + E + G +++QN+D LH ++G L E+HG++F C
Sbjct: 91 -----PTQTHMALVQLE----RVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEEC 141
Query: 167 TSC----------GVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLL 216
C G + +C +G C G L
Sbjct: 142 AKCKTQYVRDTVVGTMGLKATGRLCTVAKARGL--------------------RACRGEL 181
Query: 217 RPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNT 276
R ++ + ++L L D + DL + +GTS + P+ RG + N
Sbjct: 182 RDTILDWEDSLPDRDLALADEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNL 241
Query: 277 ETT 279
+ T
Sbjct: 242 QPT 244
>gi|7706712 sirtuin 7 [Homo sapiens]
Length = 400
Score = 55.1 bits (131), Expect = 7e-08
Identities = 62/245 (25%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 50 AKHIVIISGAGVSAESGVPTFRGAGGYW------RKWQAQDLATPLAFAHNPSRVWEFYH 103
AK++V+ +GAG+S + +P +RG G W R A DL+
Sbjct: 99 AKYLVVYTGAGISTAASIPDYRGPNGVWTLLQKGRSVSAADLS----------------- 141
Query: 104 YRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKN--LLEIHGSL 161
EP H +I TRL +Q V++QN D LH ++G + E+HG++
Sbjct: 142 -------EAEPTLTHMSI----TRLHEQKLVQHVVSQNCDGLHLRSGLPRTAISELHGNM 190
Query: 162 FKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVV 221
+ CTSC E + + + G C + CG LR +V
Sbjct: 191 YIEVCTSCVPNREYVRVFDVTERTALHRHQTGR-----------TCHK--CGTQLRDTIV 237
Query: 222 WFGEN---LDPAILEEVDRELAHCDLCLVVGTSSVV---YPAAMFAPQVAARGVPVAEFN 275
FGE P E + D L +G+S V YP + +R + N
Sbjct: 238 HFGERGTLGQPLNWEAATEAASRADTILCLGSSLKVLKKYPRLWCMTKPPSRRPKLYIVN 297
Query: 276 TETTP 280
+ TP
Sbjct: 298 LQWTP 302
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 31.2 bits (69), Expect = 1.2
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 189 APEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLV- 247
AP P T ++ + +P C AG G P F + DP + R L DL ++
Sbjct: 66 APFPFTTREALELLPIPHCPGAGRMGASPPSDYTFTSDSDPFTSQATIRHLLLADLAMLE 125
Query: 248 ---VGTSSVVYPAAMFAPQVAA 266
+ + SVV ++ AP + A
Sbjct: 126 AGWIPSPSVVTLPSLLAPDLQA 147
>gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapiens]
Length = 1086
Score = 30.4 bits (67), Expect = 2.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 232 LEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAE 273
++E++ + DL LV+G + V AA P G+PV E
Sbjct: 990 MDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLE 1031
>gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapiens]
Length = 1086
Score = 30.4 bits (67), Expect = 2.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 232 LEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAE 273
++E++ + DL LV+G + V AA P G+PV E
Sbjct: 990 MDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLE 1031
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 30.0 bits (66), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 207 CEEAGCGG-LLRPHVVWFGENLDPAILEEV 235
C E GCGG L P +FGE P IL+++
Sbjct: 342 CRELGCGGALAAPGGAFFGEGSGPIILDDL 371
>gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain 1
[Homo sapiens]
Length = 500
Score = 28.9 bits (63), Expect = 5.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 15 LYCGLKPPASTRNQICLKMARPSSSMADFRKFFAKAKHIVIISGAGVSAE 64
L G KP + R + S +F+K KAK I+II G++ E
Sbjct: 112 LCAGAKPKLICEGNPYVLGIRDTDSAQEFQKQLTKAKRIMIIGNGGIALE 161
>gi|10047144 sal-like 4 [Homo sapiens]
Length = 1053
Score = 28.5 bits (62), Expect = 7.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 172 VAENYKSPICPALSGKGAPEPGTQ 195
V NY SP G G PEPG++
Sbjct: 524 VGPNYNSPRAGGFQGSGTPEPGSE 547
>gi|109452595 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 28.5 bits (62), Expect = 7.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 174 ENYKSPICPALSGKGAPEPGTQDASIPVE---KLPRCEEAGCGGLLRPHVV 221
+ Y+ P P KGAPE G + + E K RCE+ G G H+V
Sbjct: 274 QEYRVPEKPNEEEKGAPESGEEGLAPDSEVGRKSYRCEQCGKGFSWHSHLV 324
>gi|109452593 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 28.5 bits (62), Expect = 7.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 174 ENYKSPICPALSGKGAPEPGTQDASIPVE---KLPRCEEAGCGGLLRPHVV 221
+ Y+ P P KGAPE G + + E K RCE+ G G H+V
Sbjct: 274 QEYRVPEKPNEEEKGAPESGEEGLAPDSEVGRKSYRCEQCGKGFSWHSHLV 324
>gi|169218225 PREDICTED: similar to U5 snRNP-specific 200kD protein,
partial [Homo sapiens]
Length = 1700
Score = 28.1 bits (61), Expect = 9.8
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 174 ENYKSPICPALSGKGAPEP-GTQDASIPVEKLPRCEEAGCGG 214
+ Y+ PAL P+P G+++ +PVEKLP+ +AG G
Sbjct: 4 KGYEEVHVPALK----PKPFGSEEQLLPVEKLPKYAQAGFEG 41
>gi|40217847 activating signal cointegrator 1 complex subunit 3-like
1 [Homo sapiens]
Length = 2136
Score = 28.1 bits (61), Expect = 9.8
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 174 ENYKSPICPALSGKGAPEP-GTQDASIPVEKLPRCEEAGCGG 214
+ Y+ PAL P+P G+++ +PVEKLP+ +AG G
Sbjct: 440 KGYEEVHVPALK----PKPFGSEEQLLPVEKLPKYAQAGFEG 477
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,503,613
Number of Sequences: 37866
Number of extensions: 596214
Number of successful extensions: 1375
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1343
Number of HSP's gapped (non-prelim): 24
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.