Guide to the Human Genome
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Name: ISG20L2 Sequence: fasta or formatted (353aa) NCBI GI: 13569960
Description:

interferon stimulated exonuclease gene 20kDa-like 2

Referenced in:

Interferon
RNases and RNA Stability

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         26           2
 C cysteine            1.4          5           1
 D aspartate           4.2         15           1
 E glutamate           4.5         16           2
 F phenylalanine       2.3          8           1
 G glycine             5.4         19           1
 H histidine           4.2         15           1
 I isoleucine          3.7         13           1
 K lysine             12.5         44           3
 L leucine             8.5         30           3
 M methionine          1.7          6           1
 N asparagine          5.1         18           1
 P proline             7.9         28           3
 Q glutamine           4.0         14           1
 R arginine            4.5         16           2
 S serine              9.3         33           2
 T threonine           5.4         19           1
 V valine              5.1         18           2
 W tryptophan          1.1          4           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon stimulated exonuclease gene 20kDa-like 2 ... 
AEN                   0.292   interferon stimulated exonuclease gene 20kDa-like 1...
ISG20                 0.182   interferon stimulated exonuclease 
REXO4                 0.162   XPMC2 prevents mitotic catastrophe 2 homolog 
LOC81691              0.063   exonuclease NEF-sp isoform 2 
LOC81691              0.063   exonuclease NEF-sp isoform 1 
REXO1                 0.062   transcription elongation factor B polypeptide 3 bin...
LOC100288562          0.060   PREDICTED: hypothetical protein XP_002342903 
LOC100288527          0.060   PREDICTED: hypothetical protein XP_002342902 
LOC100288500          0.060   PREDICTED: hypothetical protein XP_002342901 
LOC100288470          0.060   PREDICTED: hypothetical protein XP_002342900 
LOC100289448          0.060   PREDICTED: hypothetical protein XP_002342913, parti...
REXO1L1               0.060   exonuclease GOR 
PAN2                  0.039   PAN2 polyA specific ribonuclease subunit homolog is...
PAN2                  0.039   PAN2 polyA specific ribonuclease subunit homolog is...
NOLC1                 0.020   nucleolar and coiled-body phosphoprotein 1 
ZNF469                0.019   zinc finger protein 469 
AFF4                  0.019   ALL1 fused gene from 5q31 
HMGN2                 0.017   high-mobility group nucleosomal binding domain 2 [Hom...
LOC646049             0.016   PREDICTED: hypothetical protein 
LOC646049             0.016   PREDICTED: hypothetical protein 
LOC646049             0.016   PREDICTED: hypothetical protein 
ABI3BP                0.016   ABI gene family, member 3 (NESH) binding protein [Ho...
LOC729687             0.014   PREDICTED: similar to high-mobility group nucleosom...
LOC729687             0.014   PREDICTED: similar to high-mobility group nucleosom...
LOC729687             0.014   PREDICTED: similar to high-mobility group nucleosom...
LOC100293829          0.014   PREDICTED: similar to hCG2040565 
LOC100288691          0.014   PREDICTED: similar to hCG2040565 
LOC100288691          0.014   PREDICTED: hypothetical protein XP_002343066 
C2orf55               0.014   hypothetical protein LOC343990 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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