PAN2 10258

Name: PAN2	Sequence: fasta or formatted (1202aa)		NCBI GI: 188536114
Description: PAN2 polyA specific ribonuclease subunit homolog isoform 2		Referenced in: Polyadenylation RNases and RNA Stability Ubiquitin and Related Protein Modifications WD Repeat Proteins
Other entries for this name: alt prot [1198aa] PAN2 polyA specific ribonuclease subunit homolog isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 72 2 C cysteine 2.2 26 1 D aspartate 5.9 71 2 E glutamate 6.7 80 3 F phenylalanine 4.9 59 3 G glycine 6.2 74 2 H histidine 3.1 37 1 I isoleucine 4.8 58 2 K lysine 5.2 63 2 L leucine 11.5 138 3 M methionine 2.5 30 2 N asparagine 4.1 49 2 P proline 5.2 63 2 Q glutamine 4.2 50 2 R arginine 4.7 56 2 S serine 7.4 89 2 T threonine 5.0 60 2 V valine 6.3 76 2 W tryptophan 1.2 15 1 Y tyrosine 3.0 36 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PAN2 polyA specific ribonuclease subunit homolog is... PAN2 0.994 PAN2 polyA specific ribonuclease subunit homolog is... LOC81691 0.018 exonuclease NEF-sp isoform 2 LOC81691 0.018 exonuclease NEF-sp isoform 1 REXO4 0.017 XPMC2 prevents mitotic catastrophe 2 homolog AEN 0.013 interferon stimulated exonuclease gene 20kDa-like 1... ISG20L2 0.011 interferon stimulated exonuclease gene 20kDa-like 2 ... LOC100288562 0.010 PREDICTED: hypothetical protein XP_002342903 LOC100288527 0.010 PREDICTED: hypothetical protein XP_002342902 LOC100288500 0.010 PREDICTED: hypothetical protein XP_002342901 LOC100288470 0.010 PREDICTED: hypothetical protein XP_002342900 LOC100289448 0.010 PREDICTED: hypothetical protein XP_002342913, parti... REXO1L1 0.010 exonuclease GOR REXO1 0.008 transcription elongation factor B polypeptide 3 bin... ISG20 0.008 interferon stimulated exonuclease USP48 0.005 ubiquitin specific protease 48 isoform b USP48 0.005 ubiquitin specific protease 48 isoform a USP12 0.004 ubiquitin thiolesterase 12 USP46 0.003 ubiquitin specific peptidase 46 isoform 2 USP46 0.003 ubiquitin specific peptidase 46 isoform 1 USP3 0.003 ubiquitin thiolesterase 3 USP34 0.003 ubiquitin specific protease 34 USP53 0.003 ubiquitin specific protease 53 USP41 0.003 PREDICTED: ubiquitin specific peptidase 41 USP41 0.003 PREDICTED: ubiquitin specific protease 41 NEFM 0.003 neurofilament, medium polypeptide 150kDa isoform 1 ... SOX17 0.002 SRY-box 17 LOC342346 0.002 hypothetical protein LOC342346 TXNDC2 0.002 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.002 thioredoxin domain-containing 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.