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Search of human proteins with 6912520
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912520 mutY homolog isoform 1 [Homo sapiens]
(546 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912520 mutY homolog isoform 1 [Homo sapiens] 1107 0.0
gi|190358497 mutY homolog isoform 5 [Homo sapiens] 1102 0.0
gi|115298648 mutY homolog isoform 2 [Homo sapiens] 1075 0.0
gi|115298650 mutY homolog isoform 3 [Homo sapiens] 1050 0.0
gi|115298654 mutY homolog isoform 4 [Homo sapiens] 1048 0.0
gi|115298652 mutY homolog isoform 4 [Homo sapiens] 1048 0.0
gi|4505471 nth endonuclease III-like 1 [Homo sapiens] 47 3e-05
gi|55749678 ninein-like [Homo sapiens] 32 1.5
gi|4506775 membrane-bound transcription factor site-1 protease p... 32 1.5
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 32 1.5
gi|71773110 apolipoprotein A-IV precursor [Homo sapiens] 32 2.0
gi|40254439 endothelial PAS domain protein 1 [Homo sapiens] 31 3.3
gi|9951913 G protein-coupled receptor 162 isoform 2 [Homo sapiens] 31 3.3
gi|19913396 smoothelin isoform b [Homo sapiens] 30 4.3
gi|19913394 smoothelin isoform c [Homo sapiens] 30 4.3
gi|19913398 smoothelin isoform a [Homo sapiens] 30 4.3
gi|239047795 pleckstrin homology domain containing, family A mem... 30 5.7
gi|5729858 nuclear receptor coactivator 2 [Homo sapiens] 30 5.7
gi|89257348 homeo box HB9 [Homo sapiens] 30 5.7
gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] 30 5.7
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 30 7.4
gi|59710109 hypothetical protein LOC51300 [Homo sapiens] 30 7.4
gi|34304360 nephrocystin 3 [Homo sapiens] 29 9.7
gi|42741652 RPA-binding trans-activator [Homo sapiens] 29 9.7
gi|15718684 RPA-binding trans-activator [Homo sapiens] 29 9.7
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ... 29 9.7
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo... 29 9.7
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot... 29 9.7
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo... 29 9.7
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro... 29 9.7
>gi|6912520 mutY homolog isoform 1 [Homo sapiens]
Length = 546
Score = 1107 bits (2864), Expect = 0.0
Identities = 546/546 (100%), Positives = 546/546 (100%)
Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPG 60
MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPG
Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPG 60
Query: 61 APAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 120
APAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL
Sbjct: 61 APAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 120
Query: 121 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 180
DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG
Sbjct: 121 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 180
Query: 181 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 240
RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL
Sbjct: 181 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 240
Query: 241 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 300
CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE
Sbjct: 241 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 300
Query: 301 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 360
SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS
Sbjct: 301 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 360
Query: 361 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 420
RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE
Sbjct: 361 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 420
Query: 421 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 480
LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT
Sbjct: 421 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 480
Query: 481 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 540
AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS
Sbjct: 481 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 540
Query: 541 LNSAAQ 546
LNSAAQ
Sbjct: 541 LNSAAQ 546
>gi|190358497 mutY homolog isoform 5 [Homo sapiens]
Length = 549
Score = 1102 bits (2850), Expect = 0.0
Identities = 546/549 (99%), Positives = 546/549 (99%), Gaps = 3/549 (0%)
Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD---GMIAE 57
MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD GMIAE
Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDACAGMIAE 60
Query: 58 CPGAPAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE 117
CPGAPAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE
Sbjct: 61 CPGAPAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE 120
Query: 118 MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY 177
MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY
Sbjct: 121 MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY 180
Query: 178 SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA 237
SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA
Sbjct: 181 SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA 240
Query: 238 RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 297
RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC
Sbjct: 241 RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 300
Query: 298 PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR 357
PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR
Sbjct: 301 PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR 360
Query: 358 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL 417
KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL
Sbjct: 361 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL 420
Query: 418 LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE 477
LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE
Sbjct: 421 LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE 480
Query: 478 FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD 537
FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD
Sbjct: 481 FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD 540
Query: 538 AHSLNSAAQ 546
AHSLNSAAQ
Sbjct: 541 AHSLNSAAQ 549
>gi|115298648 mutY homolog isoform 2 [Homo sapiens]
Length = 535
Score = 1075 bits (2781), Expect = 0.0
Identities = 535/546 (97%), Positives = 535/546 (97%), Gaps = 11/546 (2%)
Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPG 60
MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG
Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG------- 53
Query: 61 APAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 120
LARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL
Sbjct: 54 ----LARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 109
Query: 121 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 180
DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG
Sbjct: 110 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 169
Query: 181 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 240
RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL
Sbjct: 170 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 229
Query: 241 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 300
CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE
Sbjct: 230 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 289
Query: 301 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 360
SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS
Sbjct: 290 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 349
Query: 361 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 420
RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE
Sbjct: 350 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 409
Query: 421 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 480
LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT
Sbjct: 410 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 469
Query: 481 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 540
AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS
Sbjct: 470 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 529
Query: 541 LNSAAQ 546
LNSAAQ
Sbjct: 530 LNSAAQ 535
>gi|115298650 mutY homolog isoform 3 [Homo sapiens]
Length = 522
Score = 1050 bits (2716), Expect = 0.0
Identities = 522/532 (98%), Positives = 522/532 (98%), Gaps = 10/532 (1%)
Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAPAGLARQPEEVVL 74
MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD AGLARQPEEVVL
Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD----------AGLARQPEEVVL 50
Query: 75 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 134
QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML
Sbjct: 51 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 110
Query: 135 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 194
QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL
Sbjct: 111 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 170
Query: 195 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 254
GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL
Sbjct: 171 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 230
Query: 255 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 314
VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL
Sbjct: 231 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 290
Query: 315 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 374
LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL
Sbjct: 291 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 350
Query: 375 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 434
EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR
Sbjct: 351 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 410
Query: 435 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 494
HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY
Sbjct: 411 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 470
Query: 495 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 546
QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ
Sbjct: 471 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 522
>gi|115298654 mutY homolog isoform 4 [Homo sapiens]
Length = 521
Score = 1048 bits (2711), Expect = 0.0
Identities = 521/532 (97%), Positives = 521/532 (97%), Gaps = 11/532 (2%)
Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAPAGLARQPEEVVL 74
MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG LARQPEEVVL
Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG-----------LARQPEEVVL 49
Query: 75 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 134
QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML
Sbjct: 50 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 109
Query: 135 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 194
QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL
Sbjct: 110 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 169
Query: 195 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 254
GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL
Sbjct: 170 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 229
Query: 255 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 314
VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL
Sbjct: 230 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 289
Query: 315 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 374
LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL
Sbjct: 290 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 349
Query: 375 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 434
EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR
Sbjct: 350 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 409
Query: 435 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 494
HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY
Sbjct: 410 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 469
Query: 495 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 546
QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ
Sbjct: 470 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 521
>gi|115298652 mutY homolog isoform 4 [Homo sapiens]
Length = 521
Score = 1048 bits (2711), Expect = 0.0
Identities = 521/532 (97%), Positives = 521/532 (97%), Gaps = 11/532 (2%)
Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAPAGLARQPEEVVL 74
MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG LARQPEEVVL
Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG-----------LARQPEEVVL 49
Query: 75 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 134
QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML
Sbjct: 50 QASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVML 109
Query: 135 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 194
QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL
Sbjct: 110 QQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 169
Query: 195 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 254
GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL
Sbjct: 170 GGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTL 229
Query: 255 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 314
VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL
Sbjct: 230 VSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQL 289
Query: 315 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 374
LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL
Sbjct: 290 LASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVL 349
Query: 375 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 434
EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR
Sbjct: 350 EQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLR 409
Query: 435 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 494
HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY
Sbjct: 410 HLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVY 469
Query: 495 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 546
QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ
Sbjct: 470 QGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 521
>gi|4505471 nth endonuclease III-like 1 [Homo sapiens]
Length = 312
Score = 47.4 bits (111), Expect = 3e-05
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 123 RAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY-SRGR 181
R Y V +S ++ QT+ + T+ + + +L +G++ S+ +
Sbjct: 128 RRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVK 187
Query: 182 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVL 240
+++ + + + GG +P + L L PGVG A ++A+G +G+ VD +V R+
Sbjct: 188 YIKQTSAILQQHYGGDIPASVAELVAL-PGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIA 246
Query: 241 CRVR---AIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 297
R+R P T + + W L ++L + N + G C P P C C
Sbjct: 247 NRLRWTKKATKSPEETRAALEEW-LPRELWH-----EINGLLVGFGQQTCLPVHPRCHAC 300
Query: 298 PVESLCRARQ 307
++LC A Q
Sbjct: 301 LNQALCPAAQ 310
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 289 PQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEEC-APNTGQCHLCLPPSEPWD 347
P RP C + P+ L R +E A + D E +P PSE W
Sbjct: 848 PLRPGCGERPLAWLAPGDGRESEEAAGAGPRRRQAQDTEATQSPAPAPAPASHGPSERWS 907
Query: 348 --QTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFP 402
Q GV K P ++ LEQPGA +L +R S +WE P
Sbjct: 908 RMQPCGVDG---DIVPKEPEPFGASAAGLEQPGARELPLLGTERDASQTQPRMWEPP 961
>gi|4506775 membrane-bound transcription factor site-1 protease
preproprotein [Homo sapiens]
Length = 1052
Score = 32.0 bits (71), Expect = 1.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 147 TGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 194
T W QKW + + L ASL + W G +S R L+ R+V + L
Sbjct: 150 TRWSQKWQSSRPLRRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTL 197
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 32.0 bits (71), Expect = 1.5
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 8 LSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAPAGL-A 66
L ++ ++++ RAA G G R A + G + +++ S +G I E P GL +
Sbjct: 195 LPQVDSVLKSLRAARGEGSRGGAEDERGEDGDGEQDAEKDGSGPEGGIVE-PRVGGGLGS 253
Query: 67 RQPEEVVLQASVSSYH 82
R EE++L +++S H
Sbjct: 254 RAQEELLLLFTMASLH 269
>gi|71773110 apolipoprotein A-IV precursor [Homo sapiens]
Length = 396
Score = 31.6 bits (70), Expect = 2.0
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 161 SASLEEVNQLWAGLGYYSRG--RRLQEGARKVVEELGGHMPRTAETLQQLLPGVG 213
SAS EE+ Q A L RG R EG +K + ELGGH+ + E ++ + G
Sbjct: 257 SASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYG 311
>gi|40254439 endothelial PAS domain protein 1 [Homo sapiens]
Length = 870
Score = 30.8 bits (68), Expect = 3.3
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 466 VPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQV 525
+PP W T+ H+ F V Q PG+ S S SS + P
Sbjct: 432 LPPSQPWATELRSHSTQSEAGSLPAFTVPQAAAPGSTTPSATSSSSSCSTPNSPEDYYTS 491
Query: 526 LDNFFRSHISTDAHSLNSAAQ 546
LDN + + ++++ A+
Sbjct: 492 LDNDLKIEVIEKLFAMDTEAK 512
>gi|9951913 G protein-coupled receptor 162 isoform 2 [Homo sapiens]
Length = 588
Score = 30.8 bits (68), Expect = 3.3
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Query: 111 RRRAEDEMDLDRRAYAVWVSE---VMLQQTQVATVINYYTGWMQKWPTLQDLASA---SL 164
RR+A + D + V+VS + L ++Y+ WM +WP L++A +L
Sbjct: 76 RRQASSDYDWNESICKVFVSTYYTLALATCFTVASLSYHRMWMVRWPVNYRLSNAKKQAL 135
Query: 165 EEVNQLW---------AGLGYYSRGRR-LQEGARKVVEELG 195
V +W +G+++ G R G + +V ++G
Sbjct: 136 HAVMGIWMVSFILSTLPSIGWHNNGERYYARGCQFIVSKIG 176
>gi|19913396 smoothelin isoform b [Homo sapiens]
Length = 915
Score = 30.4 bits (67), Expect = 4.3
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 303 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 362
C +R EQEQ + +P+ T L PP + P AS +
Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215
Query: 363 PPREESSATCV-LEQPGA 379
PP E + A C+ E PG+
Sbjct: 216 PPLEPAEAQCLTAEVPGS 233
>gi|19913394 smoothelin isoform c [Homo sapiens]
Length = 917
Score = 30.4 bits (67), Expect = 4.3
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 303 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 362
C +R EQEQ + +P+ T L PP + P AS +
Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215
Query: 363 PPREESSATCV-LEQPGA 379
PP E + A C+ E PG+
Sbjct: 216 PPLEPAEAQCLTAEVPGS 233
>gi|19913398 smoothelin isoform a [Homo sapiens]
Length = 940
Score = 30.4 bits (67), Expect = 4.3
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 303 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 362
C +R EQEQ + +P+ T L PP + P AS +
Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215
Query: 363 PPREESSATCV-LEQPGA 379
PP E + A C+ E PG+
Sbjct: 216 PPLEPAEAQCLTAEVPGS 233
>gi|239047795 pleckstrin homology domain containing, family A member
7 [Homo sapiens]
Length = 1121
Score = 30.0 bits (66), Expect = 5.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 23 GSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAPAGLARQPE 70
G +R Q EG++ +K S P+ D + + P P G QP+
Sbjct: 342 GEQYRSQRDPLEGKRDRSKARSPYSPAEEDALFMDLPTGPRGQQAQPQ 389
>gi|5729858 nuclear receptor coactivator 2 [Homo sapiens]
Length = 1464
Score = 30.0 bits (66), Expect = 5.7
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 331 PNTGQCHLCLPPSE-PWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQR 389
P GQ LP P D TL P A PP SS V+ QPG +G Q ++ +
Sbjct: 873 PRPGQLGRLLPNQNLPLDITL---QSPTGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQ 929
Query: 390 PNSG 393
N G
Sbjct: 930 GNLG 933
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 30.0 bits (66), Expect = 5.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 17/67 (25%)
Query: 316 ASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLE 375
ASG SGS C+P + + PP+ P D+ R S PPR ++ +L
Sbjct: 50 ASGGTSGS-----CSPASSE-----PPAAPADRL-------RAESPSPPRLLAAHCALLP 92
Query: 376 QPGALGA 382
+PG LGA
Sbjct: 93 KPGFLGA 99
>gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens]
Length = 988
Score = 30.0 bits (66), Expect = 5.7
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 315 LASGS-LSGSPDVEECAPNTGQCHL 338
LA GS L GS DV+EC+ T CH+
Sbjct: 22 LAGGSGLPGSVDVDECSEGTDDCHI 46
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 29.6 bits (65), Expect = 7.4
Identities = 44/183 (24%), Positives = 67/183 (36%), Gaps = 30/183 (16%)
Query: 269 PARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEE 328
P P + LG PQR + A + +Q L G L G+PD E
Sbjct: 36 PRWPAPGRRRGFRLGPVPWRPQRHNGDEAS-RLFGSAVVKAQQVPLSLGGHLRGAPDAEP 94
Query: 329 CAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSAT---CVLEQPGALGAQIL 385
P G + P T +A + PR +++T C L AL AQ+
Sbjct: 95 ARPAEG--------ARPSPGT--------RARKTRPRARTASTRRPCALCPEPALRAQLG 138
Query: 386 LVQRPNS--------GLLAGLWE--FPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRH 435
+ R L AGL + P ++ PS++++ +A +E R P +
Sbjct: 139 RLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKS 198
Query: 436 LGE 438
GE
Sbjct: 199 CGE 201
>gi|59710109 hypothetical protein LOC51300 [Homo sapiens]
Length = 285
Score = 29.6 bits (65), Expect = 7.4
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 378 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 436
G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL
Sbjct: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246
Query: 437 GEVVHT 442
E + +
Sbjct: 247 PEKIES 252
>gi|34304360 nephrocystin 3 [Homo sapiens]
Length = 1330
Score = 29.3 bits (64), Expect = 9.7
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 385 LLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 444
L+++R L+ W ++T +P++ LL+E RW L A RH G ++
Sbjct: 573 LIIKRLTLKLMQHSWSVSALTLDPAK------LLEEFPRWLEKLSA---RHQGSIIIVID 623
Query: 445 HIKLTYQV 452
I QV
Sbjct: 624 SIDQVQQV 631
>gi|42741652 RPA-binding trans-activator [Homo sapiens]
Length = 196
Score = 29.3 bits (64), Expect = 9.7
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 399 WEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALE 458
WE+ + +Q + L ++QR GP + RH+ ++H T Q AL
Sbjct: 19 WEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHV--LIHN------TLQQLQAALR 70
Query: 459 GQTPVTTVPPGARWLTQEEFH-TAAVSTAMKKVFRVYQG----QQPGTCMGSKRSQVSSP 513
P +PP +L +E+F +A + + ++++ G Q P T +G + P
Sbjct: 71 -LAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQP 129
Query: 514 C-----SRKKPRMGQQVLDNFF 530
+ +G LD+FF
Sbjct: 130 DPVFLEALSSRYLGDSGLDDFF 151
>gi|15718684 RPA-binding trans-activator [Homo sapiens]
Length = 196
Score = 29.3 bits (64), Expect = 9.7
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 399 WEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALE 458
WE+ + +Q + L ++QR GP + RH+ ++H T Q AL
Sbjct: 19 WEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHV--LIHN------TLQQLQAALR 70
Query: 459 GQTPVTTVPPGARWLTQEEFH-TAAVSTAMKKVFRVYQG----QQPGTCMGSKRSQVSSP 513
P +PP +L +E+F +A + + ++++ G Q P T +G + P
Sbjct: 71 -LAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQP 129
Query: 514 C-----SRKKPRMGQQVLDNFF 530
+ +G LD+FF
Sbjct: 130 DPVFLEALSSRYLGDSGLDDFF 151
>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
sapiens]
Length = 1376
Score = 29.3 bits (64), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 19 RAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAP 62
R+A G+G +++ASQ G Q S PS G + PG P
Sbjct: 1244 RSATGNG--RESASQPGEQWEPVQESSDSPSTSPGSASSPPGPP 1285
>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
sapiens]
Length = 1447
Score = 29.3 bits (64), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 19 RAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAP 62
R+A G+G +++ASQ G Q S PS G + PG P
Sbjct: 1244 RSATGNG--RESASQPGEQWEPVQESSDSPSTSPGSASSPPGPP 1285
>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
[Homo sapiens]
Length = 466
Score = 29.3 bits (64), Expect = 9.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 407 EPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTV 466
E E + + ++ Q+ + P PA + + E + TFS +T + L G PVT +
Sbjct: 213 EKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSK--NLPPSGAVPVTGI 270
Query: 467 PP 468
PP
Sbjct: 271 PP 272
>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
sapiens]
Length = 799
Score = 29.3 bits (64), Expect = 9.7
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 19 RAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPGAP 62
R+A G+G +++ASQ G Q S PS G + PG P
Sbjct: 596 RSATGNG--RESASQPGEQWEPVQESSDSPSTSPGSASSPPGPP 637
>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
protein [Homo sapiens]
Length = 466
Score = 29.3 bits (64), Expect = 9.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 407 EPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTV 466
E E + + ++ Q+ + P PA + + E + TFS +T + L G PVT +
Sbjct: 213 EKPEPVLEETAPEDAQKSSSPAPADIAQTVQEDLRTFSWASVTSK--NLPPSGAVPVTGI 270
Query: 467 PP 468
PP
Sbjct: 271 PP 272
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,853,646
Number of Sequences: 37866
Number of extensions: 1074788
Number of successful extensions: 3172
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3148
Number of HSP's gapped (non-prelim): 38
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.