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Search of human proteins with 68989267
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68989267 protamine 2 [Homo sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|68989267 protamine 2 [Homo sapiens] 224 1e-59
gi|4506109 protamine 1 [Homo sapiens] 46 7e-06
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 43 6e-05
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 43 6e-05
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 42 1e-04
gi|116812577 LUC7-like 2 [Homo sapiens] 41 2e-04
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 40 3e-04
gi|7705971 leucine zipper protein 4 [Homo sapiens] 39 7e-04
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 38 0.002
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 38 0.002
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 38 0.002
gi|116734696 RNA binding motif protein 23 isoform 1 [Homo sapiens] 36 0.006
gi|52426743 cisplatin resistance-associated overexpressed protei... 36 0.006
gi|19923485 cisplatin resistance-associated overexpressed protei... 36 0.006
gi|71143123 U11/U12 snRNP 48K [Homo sapiens] 36 0.007
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.010
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 35 0.010
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 35 0.010
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s... 35 0.017
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 34 0.022
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 34 0.022
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 34 0.022
gi|9945320 cyclin L1 [Homo sapiens] 34 0.022
gi|241666392 CDC-like kinase 1 isoform 2 [Homo sapiens] 34 0.028
gi|67551261 CDC-like kinase 1 isoform 1 [Homo sapiens] 34 0.028
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 34 0.028
gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo sa... 34 0.028
gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo sa... 34 0.028
>gi|68989267 protamine 2 [Homo sapiens]
Length = 102
Score = 224 bits (570), Expect = 1e-59
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MVRYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR 60
MVRYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR
Sbjct: 1 MVRYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR 60
Query: 61 RRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
RRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH
Sbjct: 61 RRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
>gi|4506109 protamine 1 [Homo sapiens]
Length = 51
Score = 45.8 bits (107), Expect = 7e-06
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 54 RRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKR-TCRRH 102
R R C + R +R++ RS RRR+RRSC+ RRR R CR R R CRRH
Sbjct: 3 RYRCCRSQSRSRYYRQRQRS-RRRRRRSCQTRRRAMRCCRPRYRPRCRRH 51
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 42.7 bits (99), Expect = 6e-05
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 3 RYRVRSLSERSH--EVYRQQLHGQEQGHH--GQEEQGLSPEHVEVYERTHGQSHYRRRHC 58
R+ + S + H E + + H ++G E G + + + G+SH R R
Sbjct: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 72
Query: 59 SRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
RR R R+ R R+R+ R R R R+ R+R R +R
Sbjct: 73 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 115
Score = 40.0 bits (92), Expect = 4e-04
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 11 ERSHEVYRQQLHGQEQGH--HGQEEQ----GLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
E S + R++L+ E G H ++E+ G S ER H +S R R SR R
Sbjct: 33 EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSR 91
Query: 65 RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
+ + RS R+K RS R+ R R+R R+ RH
Sbjct: 92 ERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
Score = 37.7 bits (86), Expect = 0.002
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 1 MVRYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRR--RHC 58
M+R R HE + + H +E + +G+ ++R R
Sbjct: 1 MIRTNFFLKQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKS 60
Query: 59 SRRRLH---RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKR 97
SR R H R R+HRS R R+R+ R R R R+ R+R R
Sbjct: 61 SRGRSHSRSRSRERRHRS-RSRERKKSRSRSRERKKSRSRSR 101
Score = 29.6 bits (65), Expect = 0.53
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 24 QEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRK--RRS 81
Q + H +++ + E ++ H R R S H+R+ R R + RS
Sbjct: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
Query: 82 CRHRRRHRRGCRTRKRTCRR 101
RRHR R RK++ R
Sbjct: 70 RSRERRHRSRSRERKKSRSR 89
Score = 27.7 bits (60), Expect = 2.0
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 5 RVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
R RS R R++ + + ++ + S E + R+ + +RR SR R
Sbjct: 68 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER---KRRIRSRSRSR 124
Query: 65 RIHRRQHRSCRRRKRRSCRHRRR---HRRGCRTRKRT 98
HR + RS R + RS ++R RR R+ RT
Sbjct: 125 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 161
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 42.7 bits (99), Expect = 6e-05
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 3 RYRVRSLSERSH--EVYRQQLHGQEQGHH--GQEEQGLSPEHVEVYERTHGQSHYRRRHC 58
R+ + S + H E + + H ++G E G + + + G+SH R R
Sbjct: 72 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSR 131
Query: 59 SRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
RR R R+ R R+R+ R R R R+ R+R R +R
Sbjct: 132 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKR 174
Score = 40.0 bits (92), Expect = 4e-04
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 11 ERSHEVYRQQLHGQEQGH--HGQEEQ----GLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
E S + R++L+ E G H ++E+ G S ER H +S R R SR R
Sbjct: 92 EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSR 150
Query: 65 RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
+ + RS R+K RS R+ R R+R R+ RH
Sbjct: 151 ERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 188
Score = 30.8 bits (68), Expect = 0.24
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 32 EEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRG 91
E GL+PE +R + R H R + RS R RKR+S R+HR
Sbjct: 7 ERDGLAPEKTSP-DRDKKKEQSEVSVSPRASKHHYSRSRSRS-RERKRKSDNEGRKHR-- 62
Query: 92 CRTRKRTCRRH 102
R+R + RRH
Sbjct: 63 SRSRSKEGRRH 73
Score = 27.7 bits (60), Expect = 2.0
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 5 RVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
R RS R R++ + + ++ + S E + R+ + +RR SR R
Sbjct: 127 RSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER---KRRIRSRSRSR 183
Query: 65 RIHRRQHRSCRRRKRRSCRHRRR---HRRGCRTRKRT 98
HR + RS R + RS ++R RR R+ RT
Sbjct: 184 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 220
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 4 YRVRSLSE-RSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRR 62
YR RS S RS R + ++ G + + S + ER+ + R R R+R
Sbjct: 8 YRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKR 67
Query: 63 LHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRK 96
L R R+ R R+R R RRR R R R+
Sbjct: 68 LRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRR 101
Score = 33.1 bits (74), Expect = 0.048
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 12 RSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYE----RTHGQSHYRRRHCSRRRLHRIH 67
R YR++ +G G + SP R+ + RRR SR R R
Sbjct: 3 RESRHYRKR--SASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS 60
Query: 68 RRQHRSCRRRKRRSCRHRRRHRRGCRTRKR 97
R + R RR R R R R RR R+R R
Sbjct: 61 RSRDRKRLRRSRSRERDRSRERRRSRSRDR 90
Score = 33.1 bits (74), Expect = 0.048
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 52 HYRRRHCSRRRLHRIHRRQHRSCRRRKR---RSCRHRRRHRRGCRTRKRTCRR 101
HYR+R SR R R + S +R KR R R R R RR R+R R RR
Sbjct: 7 HYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRR 59
Score = 29.6 bits (65), Expect = 0.53
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 23 GQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSC 82
G+E H+ + R+ +R R R RR+ RS R KRRS
Sbjct: 2 GRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR 61
Query: 83 RHRRRHRRGCRTRKR 97
R+ R R+R+R
Sbjct: 62 SRDRKRLRRSRSRER 76
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 40.8 bits (94), Expect = 2e-04
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 9 LSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHR 68
+ E+ E+ R QE+ + + ++ E E + +SH + SR R HR HR
Sbjct: 221 IREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
Query: 69 RQHRSCRRRKR-----RSCRHRRRHRRGCRTRKRTCRR 101
+ S R++R R RHR R R R+R R+ +R
Sbjct: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318
Score = 36.6 bits (83), Expect = 0.004
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 5 RVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
R++ ER E R++L + + H ++ S EH R+ S R+R +
Sbjct: 243 RLKRREEREREE-REKLR-RSRSHSKNPKRSRSREHRR--HRSRSMSRERKRRTRSKSRE 298
Query: 65 RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
+ HR + RS R + RS R RH R+R+R+ RR
Sbjct: 299 KRHRHRSRSSSRSRSRS-HQRSRHSSRDRSRERSKRR 334
Score = 27.7 bits (60), Expect = 2.0
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 3 RYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRR 62
R+R RS+S E R+ + H + S ++R+ S R R S+RR
Sbjct: 278 RHRSRSMSR---ERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR 334
Query: 63 LHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRT 98
+ R + RS R R R + +KR+
Sbjct: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRS 370
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 12 RSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQH 71
RSH ++ +E H + ++ + H R S R R H+R
Sbjct: 262 RSHSKNPKRSRSREHRRHRSRSMSRERKR-RTRSKSREKRHRHRSRSSSRSRSRSHQRSR 320
Query: 72 RSCR-----RRKRRSCRHRRR 87
S R R KRRS + R R
Sbjct: 321 HSSRDRSRERSKRRSSKERFR 341
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 40.4 bits (93), Expect = 3e-04
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 7 RSLSERSHEVYRQQLHGQ--EQGHHGQEEQG-LSPE---HVEVYERTHGQSHYRRRHCSR 60
RS SERSH ++ H ++ H G E+ SP H +R+H RR H
Sbjct: 1655 RSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPS 1714
Query: 61 RRLHRIH-RRQHRSCRRRKRRSCRHRRRH 88
+R HR RR HRS R S R H
Sbjct: 1715 KRSHRSPARRSHRSPSERSHHSPSERSHH 1743
Score = 39.7 bits (91), Expect = 5e-04
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 23/118 (19%)
Query: 7 RSLSERSHEVYRQQLHGQ--EQGHHGQEEQG-LSPE---HVEVYERTHGQSHYRRRHC-- 58
RS SERSH ++ H E+ HH E+ SP H ER H RR H
Sbjct: 1727 RSPSERSHHSPSERSHHSPSERRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPS 1786
Query: 59 ---------------SRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
S RR H R S R RS RR HR R+ +R R
Sbjct: 1787 EKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISER 1844
Score = 39.3 bits (90), Expect = 7e-04
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 8 SLSERSHEVYRQQLHG--QEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHR 65
SLSER Q+ H ++ HH E+ H ER+H S RR +R HR
Sbjct: 1624 SLSERGLHSPSQRSHRGPSQRRHHSPSERS----HRSPSERSHRSSSERRHRSPSQRSHR 1679
Query: 66 ---------IHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+HRS +R R RR H R+ + RR
Sbjct: 1680 GPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARR 1724
Score = 35.8 bits (81), Expect = 0.007
Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 5 RVRSLSERSHEVYRQQLH--GQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRR------- 55
R S SERSH ++ H E+ H ++ H ER+H RR
Sbjct: 1645 RHHSPSERSHRSPSERSHRSSSERRHRSPSQRS----HRGPSERSHCSPSERRHRSPSQR 1700
Query: 56 --RHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTC-RRH 102
R S RR H +R HRS RR RS R H R+ RRH
Sbjct: 1701 SHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRH 1750
Score = 35.4 bits (80), Expect = 0.010
Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 5 RVRSLSERSHEVYRQQLHGQ--EQGHHGQEEQG----LSPEHVEVYERTHGQSHYRRRHC 58
R RS SER H ++ H E+ HH E+ L + ER+H RR H
Sbjct: 1773 RHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHR 1832
Query: 59 SRRRLHR-IHRRQHRSCRR-------RKRRSCRHRRRHRRGCRT 94
S R HR I R H + R R S RR H +T
Sbjct: 1833 SFERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHSSSGKT 1876
Score = 33.5 bits (75), Expect = 0.037
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 13/96 (13%)
Query: 8 SLSERSHEVYRQQLHGQ--EQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHR 65
S SERS Q+ H E+ H E+GL H S R S+RR H
Sbjct: 1600 SPSERSWRSPSQRNHCSPPERSCHSLSERGL-----------HSPSQRSHRGPSQRRHHS 1648
Query: 66 IHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R HRS R RS RR R+ + R
Sbjct: 1649 PSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSER 1684
Score = 33.1 bits (74), Expect = 0.048
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 15/110 (13%)
Query: 8 SLSERSHEV--YRQQLHGQEQGHHGQEEQGLSPE---HVEVYERTHGQSHYRRRHCSRRR 62
SL ERSH R+ E+ H E+ SP H+ ER+ RR H S +
Sbjct: 1816 SLLERSHRSPSERRSHRSFERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHSSSGK 1875
Query: 63 L-----HRIHR-----RQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
R HR RQ R+ R R SC R R + + R H
Sbjct: 1876 TCHSPSERSHRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPSGRNH 1925
Score = 32.0 bits (71), Expect = 0.11
Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 8 SLSERSHEVYRQQLHG--QEQGHHGQEEQG-LSP---EHVEVYERTHGQSHYRRRHCSRR 61
S SER H Q+ H E+ HH ++ SP H ER+H R H
Sbjct: 1688 SPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSE 1747
Query: 62 RLH-----RIH----RRQHRSCRRRKRRSCRHRRRH 88
R H R H R H S R+ RS RR H
Sbjct: 1748 RRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHH 1783
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 51 SHYRRRHC---SRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
S YR R S R H R HRS R +RS RR H R+ R++
Sbjct: 1543 SFYRERTPRGPSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKN 1597
>gi|7705971 leucine zipper protein 4 [Homo sapiens]
Length = 313
Score = 39.3 bits (90), Expect = 7e-04
Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ 70
E +H R + H + QG H YER+HGQ Y+R H R H R
Sbjct: 154 EENHHSERSRNHLERSLSQSDRSQGQLKRHHPQYERSHGQ--YKRSHGQSERSHGHSERS 211
Query: 71 HRSCRR---RKRRSCRHRRRHR 89
H R RS H +R R
Sbjct: 212 HGHSERSHGHSERSHGHSKRSR 233
Score = 27.7 bits (60), Expect = 2.0
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 13 SHEVYRQQLHGQEQGHHGQEE---------QGLSPE-HVEVYERTHGQSHYRRRHCSRRR 62
++E ++ GQ +G+ Q E QG E H R H + + S+ +
Sbjct: 120 NYEAQAEKNQGQSEGNQHQSEGNPDKSEESQGQPEENHHSERSRNHLERSLSQSDRSQGQ 179
Query: 63 LHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
L R H + RS + KR + R H R+ + R H
Sbjct: 180 LKRHHPQYERSHGQYKRSHGQSERSHGHSERSHGHSERSH 219
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 38.1 bits (87), Expect = 0.002
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 18 RQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRR 77
+QQ ++G G EE+ E +V R+ ++H R R S R+ R R + R
Sbjct: 369 QQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHR 428
Query: 78 KRRSCRHRRRHRRGCRT 94
KR R R R R+ R+
Sbjct: 429 KRSRSRSRERKRKSSRS 445
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 38.1 bits (87), Expect = 0.002
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 25 EQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRH 84
E G + + G S H R+ +SH RR+ + R H R + R+R H
Sbjct: 296 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPH 355
Query: 85 RRRHRRGCRTRKRT 98
++R + R + R+
Sbjct: 356 KKRSKSRERRKSRS 369
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 45 ERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
E G+S+ R+ SR R +S RRKR +HR R R+R++ RR
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRR 350
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ 70
E+ HE R + +EQ + E+ S E E ++ ++ + R + RR
Sbjct: 438 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD-------KKSRTPPRSYNASRRS 490
Query: 71 HRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
S R R+RR R R R +T KR R
Sbjct: 491 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSR 521
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 38.1 bits (87), Expect = 0.002
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 25 EQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRH 84
E G + + G S H R+ +SH RR+ + R H R + R+R H
Sbjct: 180 ESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPH 239
Query: 85 RRRHRRGCRTRKRT 98
++R + R + R+
Sbjct: 240 KKRSKSRERRKSRS 253
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 45 ERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
E G+S+ R+ SR R +S RRKR +HR R R+R++ RR
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRR 234
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ 70
E+ HE R + +EQ + E+ S E E ++ ++ + R + RR
Sbjct: 322 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKD-------KKSRTPPRSYNASRRS 374
Query: 71 HRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
S R R+RR R R R +T KR R
Sbjct: 375 RSSSRERRRRRSRSSSRSPRTSKTIKRKSSR 405
>gi|116734696 RNA binding motif protein 23 isoform 1 [Homo sapiens]
Length = 439
Score = 36.2 bits (82), Expect = 0.006
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 46 RTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRR---HRRGCRTRKRTCRR 101
R+H +S R+R SR R R RR RS R R CRHR R R G +R R RR
Sbjct: 65 RSHNKSRDRKRSRSRDR-DRYRRRNSRS--RSPGRQCRHRSRSWDRRHGSESRSRDHRR 120
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 59 SRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRG------CRTRKRTC-RRH 102
S+++ R H + R R R R+RRR+ R CR R R+ RRH
Sbjct: 59 SKKKRSRSHNKSRDRKRSRSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRH 109
Score = 26.2 bits (56), Expect = 5.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 46 RTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRR---KRRSCRHRRRHR 89
R+ + YRRR+ R R R + RS RR + RS HRR R
Sbjct: 77 RSRDRDRYRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDR 123
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 36.2 bits (82), Expect = 0.006
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 5 RVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
R R ER + R++ +++ +E + S R+ S R CSR R H
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRS------RSRHSSRTSDRRCSRSRDH 314
Query: 65 -----RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R RR RRR R R R+HR R R+R+ R
Sbjct: 315 KRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 45 ERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRK---RRSCRHRRRHRRGCRTRK 96
ER +S RRR S R R HR + R RR K R+S +HR + R + RK
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRK 375
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 33 EQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGC 92
++ L E E ER + R +RR R + R+ R +R+ R R RH
Sbjct: 244 DERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRH--SS 301
Query: 93 RTRKRTCRR 101
RT R C R
Sbjct: 302 RTSDRRCSR 310
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 18 RQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYR-RRHCSRRRLHRIHRRQHRSC-- 74
+Q+ +E+ + E+ E ER ++ R RR SR R R R C
Sbjct: 251 KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSR 310
Query: 75 -----RRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
R R R R R R RR R+ R+ R+H
Sbjct: 311 SRDHKRSRSRERRRSRSRDRRRSRSHDRSERKH 343
Score = 30.8 bits (68), Expect = 0.24
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 3 RYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR-- 60
R R R ER E R + + + S R H +S R R SR
Sbjct: 270 RKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCS-RSRDHKRSRSRERRRSRSR 328
Query: 61 -RRLHRIH---RRQHRSCRRRKRRS-CRHRRRHRRGCRTRKR 97
RR R H R+HRS R +RRS R R+ ++ ++R R
Sbjct: 329 DRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDR 370
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 9 LSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHR 68
L +R+ E R + +E+ + E+ E E + + R + +R R R
Sbjct: 234 LRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 69 RQH-RSCRRRKRRSCRHRRRHRRGCRTRKR 97
R R R R C R H+R R+R+R
Sbjct: 294 RSRSRHSSRTSDRRCSRSRDHKRS-RSRER 322
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 36.2 bits (82), Expect = 0.006
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 5 RVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH 64
R R ER + R++ +++ +E + S R+ S R CSR R H
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRS------RSRHSSRTSDRRCSRSRDH 314
Query: 65 -----RIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R RR RRR R R R+HR R R+R+ R
Sbjct: 315 KRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 45 ERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRK---RRSCRHRRRHRRGCRTRK 96
ER +S RRR S R R HR + R RR K R+S +HR + R + RK
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRK 375
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 33 EQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGC 92
++ L E E ER + R +RR R + R+ R +R+ R R RH
Sbjct: 244 DERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRH--SS 301
Query: 93 RTRKRTCRR 101
RT R C R
Sbjct: 302 RTSDRRCSR 310
Score = 31.2 bits (69), Expect = 0.18
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Query: 18 RQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYR-RRHCSRRRLHRIHRRQHRSC-- 74
+Q+ +E+ + E+ E ER ++ R RR SR R R R C
Sbjct: 251 KQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSR 310
Query: 75 -----RRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
R R R R R R RR R+ R+ R+H
Sbjct: 311 SRDHKRSRSRERRRSRSRDRRRSRSHDRSERKH 343
Score = 30.8 bits (68), Expect = 0.24
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 3 RYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR-- 60
R R R ER E R + + + S R H +S R R SR
Sbjct: 270 RKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCS-RSRDHKRSRSRERRRSRSR 328
Query: 61 -RRLHRIH---RRQHRSCRRRKRRS-CRHRRRHRRGCRTRKR 97
RR R H R+HRS R +RRS R R+ ++ ++R R
Sbjct: 329 DRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDR 370
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 9 LSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHR 68
L +R+ E R + +E+ + E+ E E + + R + +R R R
Sbjct: 234 LRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Query: 69 RQH-RSCRRRKRRSCRHRRRHRRGCRTRKR 97
R R R R C R H+R R+R+R
Sbjct: 294 RSRSRHSSRTSDRRCSRSRDHKRS-RSRER 322
>gi|71143123 U11/U12 snRNP 48K [Homo sapiens]
Length = 339
Score = 35.8 bits (81), Expect = 0.007
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 4 YRVRS--LSERSH-EVYRQ--QLHGQEQGHHGQEEQGLSPEHVEVYERTHGQS------- 51
YR ++ ++++S+ EV R +H +E +H QEEQ + + E E S
Sbjct: 225 YRAKNVHITKKSYTEVIRDVINVHMEELSNHWQEEQEKAEDDAEKNEERRSASVDSRQSG 284
Query: 52 -HYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRR 90
Y CSR R R R + K ++C RRR R
Sbjct: 285 GSYLDAECSRHRRDRSRSPHKRKRNKDKDKNCESRRRKER 324
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 19 QQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRK 78
QQ+ +E+ HH ++E+ +H V E+ + + RR R + R R RR
Sbjct: 89 QQMSRKEKVHHRKDEKRKEKKHARVKEK---EREHERRKRHREEQDKARREWERQKRREM 145
Query: 79 RRSCRHRRRHRRGCRTRKRTCRR 101
R R R R RKR R
Sbjct: 146 AREHSRRERDRLEQLERKRERER 168
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 35.4 bits (80), Expect = 0.010
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 19 QQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRK 78
QQ+ +E+ HH ++E+ +H V E+ + + RR R + R R RR
Sbjct: 55 QQMSRKEKVHHRKDEKRKEKKHARVKEK---EREHERRKRHREEQDKARREWERQKRREM 111
Query: 79 RRSCRHRRRHRRGCRTRKRTCRR 101
R R R R RKR R
Sbjct: 112 AREHSRRERDRLEQLERKRERER 134
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 14 HEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRS 73
+E +R ++ + + GQE++ P ++ G+S R S + R + RS
Sbjct: 714 YEFFRAKMRARRR--KGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRS 771
Query: 74 CRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
C R RS R R R+R R+ R
Sbjct: 772 CSRSYSRSRSRSRSRSRSSRSRSRSQSR 799
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 35.0 bits (79), Expect = 0.013
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 11 ERSHEVYRQQLHGQEQGHHG-------------QEEQGLSPEHVEVYERTHGQSHYRRRH 57
ER ++ R+ H Q H Q+E+ + ER + R+R
Sbjct: 26 ERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETERQRERQRQ 85
Query: 58 CSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+R R + R R RKR + R+R R+R+G R R + R
Sbjct: 86 RERKRQTDRERDKDRD-RERKRETDRNRERNRKGGRERDKQTER 128
Score = 31.2 bits (69), Expect = 0.18
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 10 SERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRR---LHRI 66
++R+ E R + G+E+ + E+ E ER + R+R R R R
Sbjct: 108 TDRNRE--RNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAERE 165
Query: 67 HRRQHRSCRRRKRRSCRHRRRHRRGCRTRK 96
R++ R R+K R + + RR + RK
Sbjct: 166 ERKKERKKERKKERKEKKKEEKRREDKKRK 195
Score = 28.1 bits (61), Expect = 1.6
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHR-- 68
E E RQ+ +++ Q ++ + +R ++ R R R R + R
Sbjct: 71 ETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERER 130
Query: 69 -RQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+ R+R+R R R R R R R+R R
Sbjct: 131 DRERERQRQRERERQRQRERKRETDRERQRWAER 164
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 31 QEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRR 90
Q E+ + + ER + R R HR R R+ R R R++ R
Sbjct: 4 QRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERD 63
Query: 91 GCRTRKRTCRR 101
R R+R R
Sbjct: 64 RQRQRERETER 74
Score = 26.6 bits (57), Expect = 4.5
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ 70
+R E R+ +E+ G E+ E ER + R+R R+R R
Sbjct: 99 DRDRERKRETDRNRERNRKGGRERDKQTER----ERDRERERQRQRERERQRQRERKRET 154
Query: 71 HRSCRRRKRRSCRHRRRHRRGCRTRK 96
R +R R R + R + + RK
Sbjct: 155 DRERQRWAEREERKKERKKERKKERK 180
Score = 25.8 bits (55), Expect = 7.7
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 19 QQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRR-R 77
+Q + + G+E + E +T ++ +R+R R R + R + R ++ R
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62
Query: 78 KRRSCRHRRRHRRGCRTRKRTCRR 101
R+ R R R R R+R +R
Sbjct: 63 DRQRQRERETERETERQRERQRQR 86
>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
sapiens]
Length = 234
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 49 GQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
G RR+ C R RR+ R+ RRRK +CR RR RR RK+ C R
Sbjct: 7 GSPGRRRQRCQSRG-----RRRPRAPRRRKAPACRRRRARRR----RKKPCPR 50
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 34.7 bits (78), Expect = 0.017
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 7 RSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRI 66
R ER E R++ ++Q +E++ + E +R Q R R + R R
Sbjct: 66 RKKRERGKERERKRKEREKQRKERREKERRKRKK-EKKKRERKQRGRRERKKKKERKERE 124
Query: 67 HRRQHRSCRRRKRRSCRHRRRHR-----RGCRTRKRTCRR 101
+ R R+RK+R + RR+ R RG R RKR R+
Sbjct: 125 RENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRK 164
Score = 33.1 bits (74), Expect = 0.048
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ 70
E+ +++ +E+ G+ E+ E E ER + Q R+R R++ R R++
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKE-RERENKQRRERKRKKRRKKKRRKERKR 149
Query: 71 HRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
+ +R+R+ + ++ R R R R R+
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERK 180
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 10 SERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRR 69
SER E ++ +E+ + E+G E+ + R + R+R R +R
Sbjct: 34 SERKKERREREKRKREREKERKRERGKK-------EKKKRKKRERGKERERKRKEREKQR 86
Query: 70 QHRSCRRRKRRSCRHRRRHR--RGCRTRKRTCRR 101
+ R + R++R ++R R RG R RK+ R
Sbjct: 87 KERREKERRKRKKEKKKRERKQRGRRERKKKKER 120
Score = 29.3 bits (64), Expect = 0.70
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 31 QEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRR 90
Q E E E +R + R+R ++ + +R+ R RKR+ +R+ RR
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 91 GCRTRKR 97
RKR
Sbjct: 91 EKERRKR 97
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 58 CSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKR 97
C++R R R+ R R+R+R R R R ++ + RK+
Sbjct: 29 CTQRESERKKERREREKRKREREKERKRERGKKEKKKRKK 68
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/88 (18%), Positives = 40/88 (45%)
Query: 3 RYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRR 62
R + R ++ + ++ G+ + +E + E+ + ER + ++R R+R
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKR 149
Query: 63 LHRIHRRQHRSCRRRKRRSCRHRRRHRR 90
+R+ + +R+K + R R+R+
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRK 177
Score = 26.2 bits (56), Expect = 5.9
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 32 EEQGLSPEHVE--VYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHR 89
E Q +S H+ +R + RR R+R R++ R + +K+R R R + R
Sbjct: 16 ELQMVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKER 75
Query: 90 RGCRTRKRTCRR 101
R + R+
Sbjct: 76 ERKRKEREKQRK 87
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 26 QGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR---RRLHRIHRRQHRSCRRRKRRSC 82
Q H QE + P EV R R SR RR R R RS RR R
Sbjct: 407 QKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRS 466
Query: 83 RHRRRHRRGCRTRKRTCR 100
R RRRH R+++R R
Sbjct: 467 RDRRRHSPRSRSQERRDR 484
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 55 RRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
+RH S R R RRR R R RR R R+R R RRH
Sbjct: 425 KRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRH 472
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 46 RTHGQSHYRRRHCSRRRLHRI-HRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+ +S RRR S R R HRR R R+R S R R + RR R ++R R+
Sbjct: 437 RSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRD-REKERERRQ 492
Score = 28.1 bits (61), Expect = 1.6
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 18 RQQLH-GQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH----RIHRRQHR 72
RQQ + G++Q G+ G VE +G + R + +R R R +HR
Sbjct: 966 RQQFNSGRDQERFGRRSFG---NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHR 1022
Query: 73 SCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R RRS HR R R +R R RR
Sbjct: 1023 DLEERNRRSSGHRDRER---DSRDRESRR 1048
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 26 QGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR---RRLHRIHRRQHRSCRRRKRRSC 82
Q H QE + P EV R R SR RR R R RS RR R
Sbjct: 392 QKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRS 451
Query: 83 RHRRRHRRGCRTRKRTCR 100
R RRRH R+++R R
Sbjct: 452 RDRRRHSPRSRSQERRDR 469
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 55 RRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
+RH S R R RRR R R RR R R+R R RRH
Sbjct: 410 KRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRH 457
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 46 RTHGQSHYRRRHCSRRRLHRI-HRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+ +S RRR S R R HRR R R+R S R R + RR R ++R R+
Sbjct: 422 RSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRD-REKERERRQ 477
Score = 28.1 bits (61), Expect = 1.6
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 18 RQQLH-GQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH----RIHRRQHR 72
RQQ + G++Q G+ G VE +G + R + +R R R +HR
Sbjct: 973 RQQFNSGRDQERFGRRSFG---NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHR 1029
Query: 73 SCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R RRS HR R R +R R RR
Sbjct: 1030 DLEERNRRSSGHRDRER---DSRDRESRR 1055
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 26 QGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSR---RRLHRIHRRQHRSCRRRKRRSC 82
Q H QE + P EV R R SR RR R R RS RR R
Sbjct: 407 QKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRS 466
Query: 83 RHRRRHRRGCRTRKRTCR 100
R RRRH R+++R R
Sbjct: 467 RDRRRHSPRSRSQERRDR 484
Score = 34.3 bits (77), Expect = 0.022
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 55 RRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRRH 102
+RH S R R RRR R R RR R R+R R RRH
Sbjct: 425 KRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRH 472
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 46 RTHGQSHYRRRHCSRRRLHRI-HRRQHRSCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R+ +S RRR S R R HRR R R+R S R R + RR R ++R R+
Sbjct: 437 RSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRD-REKERERRQ 492
Score = 28.1 bits (61), Expect = 1.6
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 18 RQQLH-GQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLH----RIHRRQHR 72
RQQ + G++Q G+ G VE +G + R + +R R R +HR
Sbjct: 988 RQQFNSGRDQERFGRRSFG---NRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHR 1044
Query: 73 SCRRRKRRSCRHRRRHRRGCRTRKRTCRR 101
R RRS HR R R +R R RR
Sbjct: 1045 DLEERNRRSSGHRDRER---DSRDRESRR 1070
>gi|9945320 cyclin L1 [Homo sapiens]
Length = 526
Score = 34.3 bits (77), Expect = 0.022
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 4 YRVRSLSE-RSHEVYRQQLHGQEQGH----HGQEEQGLSPEHVEVYERTHGQSHYRRR-H 57
Y RS S RSH ++ H H H +++ S H +++ +S + R H
Sbjct: 422 YSSRSRSRSRSHSESPRRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDH 481
Query: 58 CSRRRLHRIHRRQHRSCRRRKRRSCR-HRRRHRRGCRTRKRTCRR 101
+ HR R HR R R R R H+ +H G R+ RR
Sbjct: 482 SDAAKKHRHERGHHRDRRERSRSFERSHKSKHHGGSRSGHGRHRR 526
Score = 33.5 bits (75), Expect = 0.037
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 17/114 (14%)
Query: 3 RYRVRSLSERSHEVYRQQLHGQEQ-GHHGQEEQGLSPEHVEVYER--THGQSHYRRRHCS 59
R R RS S RSH R + + + G + + S H E R HG H + +H +
Sbjct: 396 RSRTRSRS-RSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHLKAKH-T 453
Query: 60 RRRLHRIHRRQHRSCRRRKR------------RSCRHRRRHRRGCRTRKRTCRR 101
R L +R H+ + R R + RH R H R R R R+ R
Sbjct: 454 RDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFER 507
>gi|241666392 CDC-like kinase 1 isoform 2 [Homo sapiens]
Length = 526
Score = 33.9 bits (76), Expect = 0.028
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 10 SERSHEVYRQQL-HGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHR--I 66
S R + YR G E GH ++ + H G+S Y+ +H R+H
Sbjct: 111 SRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKH----RIHHSTS 166
Query: 67 HRRQHRSCRRRKR 79
HRR H RRKR
Sbjct: 167 HRRSHGKSHRRKR 179
>gi|67551261 CDC-like kinase 1 isoform 1 [Homo sapiens]
Length = 484
Score = 33.9 bits (76), Expect = 0.028
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 10 SERSHEVYRQQL-HGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHR--I 66
S R + YR G E GH ++ + H G+S Y+ +H R+H
Sbjct: 69 SRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKH----RIHHSTS 124
Query: 67 HRRQHRSCRRRKR 79
HRR H RRKR
Sbjct: 125 HRRSHGKSHRRKR 137
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYE----RTHGQSHYRRRHCSRRRLHRI 66
ERS + RQQL Q++ + + Q L+ + E R + RR R++ R
Sbjct: 363 ERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQERE 422
Query: 67 HRRQHRSCRRR--KRRSCRHRRRHRRGCRTRKRTCRR 101
RR + RR +RR H + ++R +R R
Sbjct: 423 QRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
>gi|239735590 TRAF2 and NCK interacting kinase isoform 7 [Homo
sapiens]
Length = 1276
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYE----RTHGQSHYRRRHCSRRRLHRI 66
ERS + RQQL Q++ + + Q L+ + E R + RR R++ R
Sbjct: 363 ERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQERE 422
Query: 67 HRRQHRSCRRR--KRRSCRHRRRHRRGCRTRKRTCRR 101
RR + RR +RR H + ++R +R R
Sbjct: 423 QRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
>gi|239735584 TRAF2 and NCK interacting kinase isoform 4 [Homo
sapiens]
Length = 1323
Score = 33.9 bits (76), Expect = 0.028
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 11 ERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYE----RTHGQSHYRRRHCSRRRLHRI 66
ERS + RQQL Q++ + + Q L+ + E R + RR R++ R
Sbjct: 363 ERSEALRRQQLEQQQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQERE 422
Query: 67 HRRQHRSCRRR--KRRSCRHRRRHRRGCRTRKRTCRR 101
RR + RR +RR H + ++R +R R
Sbjct: 423 QRRHYEEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.330 0.136 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,717,924
Number of Sequences: 37866
Number of extensions: 241001
Number of successful extensions: 3121
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 1749
Number of HSP's gapped (non-prelim): 970
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.