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Search of human proteins with 68223315
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens]
(312 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens] 611 e-175
gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens] 609 e-174
gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens] 593 e-170
gi|4506163 presenilin 1 isoform I-467 [Homo sapiens] 42 0.001
gi|195947397 presenilin 1 isoform I-463 [Homo sapiens] 42 0.001
gi|52627217 olfactory receptor, family 2, subfamily AT, member 4... 37 0.029
gi|7363441 olfactory receptor, family 11, subfamily A, member 1 ... 36 0.038
gi|156105681 presenilin 2 isoform 2 [Homo sapiens] 36 0.050
gi|156105679 presenilin 2 isoform 1 [Homo sapiens] 36 0.050
gi|154426280 V-set and immunoglobulin domain containing 4 isofor... 35 0.11
gi|6005958 V-set and immunoglobulin domain containing 4 isoform ... 35 0.11
gi|11415034 olfactory receptor, family 1, subfamily G, member 1 ... 35 0.11
gi|6912554 olfactory receptor, family 1, subfamily F, member 1 [... 35 0.11
gi|50054470 olfactory receptor, family 14, subfamily C, member 3... 33 0.25
gi|53793673 olfactory receptor, family 10, subfamily C, member 1... 33 0.42
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ... 32 0.72
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ... 32 0.72
gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo sapi... 32 0.95
gi|50233850 olfactory receptor, family 6, subfamily S, member 1 ... 32 0.95
gi|7657423 olfactory receptor, family 1, subfamily D, member 5 [... 32 0.95
gi|226371762 transmembrane protein 64 isoform 2 [Homo sapiens] 31 1.2
gi|223555958 transmembrane protein 64 isoform 1 [Homo sapiens] 31 1.2
gi|52353344 olfactory receptor, family 7, subfamily A, member 10... 31 1.2
gi|119943143 olfactory receptor, family 1, subfamily D, member 4... 31 1.2
gi|53933270 olfactory receptor, family 6, subfamily C, member 6 ... 31 1.2
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 30 2.8
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 30 2.8
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 30 2.8
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 30 2.8
gi|32401447 solute carrier family 46, member 3 isoform a [Homo s... 30 2.8
>gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens]
Length = 312
Score = 611 bits (1575), Expect = e-175
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
Sbjct: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
Query: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
Sbjct: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
Query: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
Sbjct: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
Query: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
Sbjct: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
Query: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
Sbjct: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
Query: 301 PPRKAVEEPLNE 312
PPRKAVEEPLNE
Sbjct: 301 PPRKAVEEPLNE 312
>gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens]
Length = 323
Score = 609 bits (1570), Expect = e-174
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
Sbjct: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
Query: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
Sbjct: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
Query: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
Sbjct: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
Query: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
Sbjct: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
Query: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
Sbjct: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
Query: 301 PPRKAVEEPLN 311
PPRKAVEEPLN
Sbjct: 301 PPRKAVEEPLN 311
>gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens]
Length = 305
Score = 593 bits (1530), Expect = e-170
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF
Sbjct: 1 MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVTNMEAQNTTEVYVKWKF 60
Query: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT
Sbjct: 61 KGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELT 120
Query: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL
Sbjct: 121 REGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGMDEKTIALL 180
Query: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA
Sbjct: 181 VAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIA 240
Query: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ
Sbjct: 241 ILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLGLVYMKFVASNQKTIQ 300
Query: 301 PPR 303
PPR
Sbjct: 301 PPR 303
>gi|4506163 presenilin 1 isoform I-467 [Homo sapiens]
Length = 467
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 115 EVTELTREGETIIELKY---RVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGG 171
+V E E + + LKY V+ F P ++V+ + F+ + + + Y
Sbjct: 61 QVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLI-YTPFT 119
Query: 172 MDEKTI------ALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHY 225
D +T+ ++L A ++I+VIV++ +L V +Y LI++S +L +
Sbjct: 120 EDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSF 179
Query: 226 YVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLG 285
+ + + + ++ + VVG+ I GPL + ++ ++ L+
Sbjct: 180 IYLGEVFKTYNVAVDYITVALLIWNFGVVGM-----ISIHWKGPLRLQQAYLIMISALMA 234
Query: 286 LVYMKFV 292
LV++K++
Sbjct: 235 LVFIKYL 241
>gi|195947397 presenilin 1 isoform I-463 [Homo sapiens]
Length = 463
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/187 (20%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 115 EVTELTREGETIIELKY---RVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGG 171
+V E E + + LKY V+ F P ++V+ + F+ + + + Y
Sbjct: 57 QVVEQDEEEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLI-YTPFT 115
Query: 172 MDEKTI------ALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHY 225
D +T+ ++L A ++I+VIV++ +L V +Y LI++S +L +
Sbjct: 116 EDTETVGQRALHSILNAAIMISVIVVMTILLVVLYKYRCYKVIHAWLIISSLLLLFFFSF 175
Query: 226 YVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALAQLLG 285
+ + + + ++ + VVG+ I GPL + ++ ++ L+
Sbjct: 176 IYLGEVFKTYNVAVDYITVALLIWNFGVVGM-----ISIHWKGPLRLQQAYLIMISALMA 230
Query: 286 LVYMKFV 292
LV++K++
Sbjct: 231 LVFIKYL 237
>gi|52627217 olfactory receptor, family 2, subfamily AT, member 4
[Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.029
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 177 IALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTA-IGLT 235
+ +L+ +I V V+ L P + L N + L ++ T+T + +L ++ + +
Sbjct: 41 LLILMGNALILVAVVAEPSLHKPMYFFLINLSTLDILFTTTTVPKMLSLFLLGDRFLSFS 100
Query: 236 SFVIAILVIQVI----AYILAVVGLSLCIAACIPMHGPLLISGLSILALA 281
S ++ + + Q A+IL V+ +A C P+H P+L++ + LA
Sbjct: 101 SCLLQMYLFQSFTCSEAFILVVMAYDRYVAICHPLHYPVLMNPQTNATLA 150
>gi|7363441 olfactory receptor, family 11, subfamily A, member 1
[Homo sapiens]
Length = 315
Score = 36.2 bits (82), Expect = 0.038
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 177 IALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTS 236
+ +++ ++I V V+ L P L N + L ++ TS + +L ++ I +
Sbjct: 38 VFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDILYTSAVMPKMLEGFLQEATISVAG 97
Query: 237 FVIAILVIQVIA----YILAVVGLSLCIAACIPMHGPLLI 272
++ + +A +LAV+ +A C P+H PLL+
Sbjct: 98 CLLQFFIFGSLATAECLLLAVMAYDRYLAICYPLHYPLLM 137
>gi|156105681 presenilin 2 isoform 2 [Homo sapiens]
Length = 447
Score = 35.8 bits (81), Expect = 0.050
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 101 DKSDAVSHTGNYTCEVTELTREG-ETIIELKY---RVVSWFSPNENILIVIFPIFAILLF 156
++ D Y C G E + LKY V+ F P +IV+ + F
Sbjct: 52 NEEDGEEDPDRYVCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRF 111
Query: 157 W----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVIVGAILFVPGEYSLKNATGLG 211
+ GQ + + ++ + ++L ++I+VIV++ L V +Y
Sbjct: 112 YTEKNGQLIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGW 171
Query: 212 LIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLL 271
LI++S +L L Y + + + + + + VG+ CI GPL+
Sbjct: 172 LIMSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLLLTVWNFGAVGM-----VCIHWKGPLV 226
Query: 272 ISGLSILALAQLLGLVYMKFV 292
+ ++ ++ L+ LV++K++
Sbjct: 227 LQQAYLIMISALMALVFIKYL 247
>gi|156105679 presenilin 2 isoform 1 [Homo sapiens]
Length = 448
Score = 35.8 bits (81), Expect = 0.050
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 101 DKSDAVSHTGNYTCEVTELTREG-ETIIELKY---RVVSWFSPNENILIVIFPIFAILLF 156
++ D Y C G E + LKY V+ F P +IV+ + F
Sbjct: 52 NEEDGEEDPDRYVCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRF 111
Query: 157 W----GQFGIKTLKYRSGGMDEKTI-ALLVAGLVITVIVIVGAILFVPGEYSLKNATGLG 211
+ GQ + + ++ + ++L ++I+VIV++ L V +Y
Sbjct: 112 YTEKNGQLIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGW 171
Query: 212 LIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLL 271
LI++S +L L Y + + + + + + VG+ CI GPL+
Sbjct: 172 LIMSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLLLTVWNFGAVGM-----VCIHWKGPLV 226
Query: 272 ISGLSILALAQLLGLVYMKFV 292
+ ++ ++ L+ LV++K++
Sbjct: 227 LQQAYLIMISALMALVFIKYL 247
>gi|154426280 V-set and immunoglobulin domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 34.7 bits (78), Expect = 0.11
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 VVIPCFVTNMEAQNTTEVYVKWKF-KGRDIYT-FDGALNKSTVPTDFSSAKIEVSQLLKG 94
V +PC T Q T+V VKW +G D T F + + ++ VS + G
Sbjct: 37 VNLPC--TYDPLQGYTQVLVKWLVQRGSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPG 94
Query: 95 DASLKMDKSDAVSHTGNYTCEVTELTREGETIIELK 130
D SL++ + + +YTCEVT T +G ++ K
Sbjct: 95 DVSLQLSTLE-MDDRSHYTCEVTWQTPDGNQVVRDK 129
>gi|6005958 V-set and immunoglobulin domain containing 4 isoform 1
[Homo sapiens]
Length = 399
Score = 34.7 bits (78), Expect = 0.11
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 37 VVIPCFVTNMEAQNTTEVYVKWKF-KGRDIYT-FDGALNKSTVPTDFSSAKIEVSQLLKG 94
V +PC T Q T+V VKW +G D T F + + ++ VS + G
Sbjct: 37 VNLPC--TYDPLQGYTQVLVKWLVQRGSDPVTIFLRDSSGDHIQQAKYQGRLHVSHKVPG 94
Query: 95 DASLKMDKSDAVSHTGNYTCEVTELTREGETIIELK 130
D SL++ + + +YTCEVT T +G ++ K
Sbjct: 95 DVSLQLSTLE-MDDRSHYTCEVTWQTPDGNQVVRDK 129
>gi|11415034 olfactory receptor, family 1, subfamily G, member 1
[Homo sapiens]
Length = 313
Score = 34.7 bits (78), Expect = 0.11
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 181 VAG-LVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGI-LILLHYYVFSTAIGLTSFV 238
VAG L+I +++I L P + L N + ST + +L + + S AI + +
Sbjct: 39 VAGNLLIILVIITDTQLHTPMYFFLANLSLADACFVSTTVPKMLANIQIQSQAISYSGCL 98
Query: 239 IAI----LVIQVIAYILAVVGLSLCIAACIPMHGPLLIS-GLSILALA 281
+ + L + + A++LAV+ +A C P+H L++S GL I ++
Sbjct: 99 LQLYFFMLFVMLEAFLLAVMAYDCYVAICHPLHYILIMSPGLCIFLVS 146
>gi|6912554 olfactory receptor, family 1, subfamily F, member 1
[Homo sapiens]
Length = 312
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 177 IALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAI---- 232
+A ++ L+I + V + + L P + L N + + + + T + +L ++ T
Sbjct: 36 LATVLGNLLIILSVSIDSCLHTPMYFFLSNLSFVDICFSFTTVPKMLANHILETQTISFC 95
Query: 233 -GLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMH---------GPLLISGLSILA--- 279
LT + + + ++LAV+ +A C P+H LL++GL ++A
Sbjct: 96 GCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLN 155
Query: 280 -LAQLLGLVYMKFVASNQKT 298
L L + + F A N T
Sbjct: 156 VLLHTLLMAPLSFCADNAIT 175
>gi|50054470 olfactory receptor, family 14, subfamily C, member 36
[Homo sapiens]
Length = 312
Score = 33.5 bits (75), Expect = 0.25
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 177 IALLVAGLVITVIVIVGAILFVPGEYSLKN-----ATGLGLIVTSTGILILLHYYVFSTA 231
+ L+ ++I + + L +P + L+N A + + V ++ + LL S A
Sbjct: 34 LVTLMGNILIVTVTTCDSSLHMPMYFFLRNLSILDACYISVTVPTSCVNSLLDSTTISKA 93
Query: 232 IGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSI--LALAQLL-GLVY 288
+ + + + V L ++ +A C P+H P++++ + LA LL GLVY
Sbjct: 94 GCVAQVFLVVFFVYVELLFLTIMAHDRYVAVCQPLHYPVIVNSRICIQMTLASLLSGLVY 153
>gi|53793673 olfactory receptor, family 10, subfamily C, member 1
[Homo sapiens]
Length = 312
Score = 32.7 bits (73), Expect = 0.42
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 179 LLVAG-LVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHY------YVFSTA 231
L VAG +I V+V A L P + L+ + L + TS + +LLH+ ++ +
Sbjct: 36 LTVAGNFLIVVLVSTDAALQSPMYFFLRTLSALEIGYTSVTVPLLLHHLLTGRRHISRSG 95
Query: 232 IGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALA-------QLL 284
L F +LA + A C P+ PLL+S L LA L+
Sbjct: 96 CALQMFFFLFFGATECC-LLAAMAYDRYAAICEPLRYPLLLSHRVCLQLAGSAWACGVLV 154
Query: 285 GLVYMKFVAS 294
GL + F+ S
Sbjct: 155 GLGHTPFIFS 164
>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
sapiens]
Length = 391
Score = 32.0 bits (71), Expect = 0.72
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 113 TCEVTELTREGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGM 172
TC V +T G I L V S +++VI P+ A++ G
Sbjct: 95 TCLVLVITALGVVITSLGVVVTS-------LVMVITPLVAVITPLG-------------- 133
Query: 173 DEKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAI 232
+ + +VIT +V+V L V S+ T L +++TS ++I + V + +
Sbjct: 134 ----VVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVITSLTVIITSLFVVITPLV 189
Query: 233 GLTSFVIAILVIQVIAYILAVVG-------LSLCIAACIPMHGPLLISGLSILALAQLLG 285
+ +F+I + V+ I +V + CI + + PL++ S++ + L
Sbjct: 190 MVITFLIVVNTSLVVVLITLIVSPPPSLWLSAPCITSLFVVIIPLVVVITSLIVVITSLV 249
Query: 286 LVYMKFV 292
+V + +
Sbjct: 250 VVLIAVI 256
>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
sapiens]
Length = 398
Score = 32.0 bits (71), Expect = 0.72
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 113 TCEVTELTREGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQFGIKTLKYRSGGM 172
TC V +T G I L V S +++VI P+ A++ G
Sbjct: 102 TCLVLVITALGVVITSLGVVVTS-------LVMVITPLVAVITPLG-------------- 140
Query: 173 DEKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAI 232
+ + +VIT +V+V L V S+ T L +++TS ++I + V + +
Sbjct: 141 ----VVITSLVVVITSLVMVITSLTVVITSSIVVITPLVMVITSLTVIITSLFVVITPLV 196
Query: 233 GLTSFVIAILVIQVIAYILAVVG-------LSLCIAACIPMHGPLLISGLSILALAQLLG 285
+ +F+I + V+ I +V + CI + + PL++ S++ + L
Sbjct: 197 MVITFLIVVNTSLVVVLITLIVSPPPSLWLSAPCITSLFVVIIPLVVVITSLIVVITSLV 256
Query: 286 LVYMKFV 292
+V + +
Sbjct: 257 VVLIAVI 263
>gi|24308434 glucose-6-phosphatase catalytic subunit 3 [Homo
sapiens]
Length = 346
Score = 31.6 bits (70), Expect = 0.95
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 223 LHYYVFSTAIGLTS-FVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLSILALA 281
L Y F A+GL+ F++A QV+A ++ L + +PM L GL+ LAL
Sbjct: 148 LAYCTFLLAVGLSRIFILAHFPHQVLAGLITGAVLGWLMTPRVPMERELSFYGLTALALM 207
Query: 282 QLLGLVY 288
L+Y
Sbjct: 208 LGTSLIY 214
>gi|50233850 olfactory receptor, family 6, subfamily S, member 1
[Homo sapiens]
Length = 331
Score = 31.6 bits (70), Expect = 0.95
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 180 LVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYV-----FSTAIGL 234
L ++I +V L P + L N + L +++TS I +L ++ S A +
Sbjct: 41 LTGNVLIVGVVRADTRLQTPMYFFLGNLSCLEILLTSVIIPKMLSNFLSRQHTISFAACI 100
Query: 235 TSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISG 274
T F + +LAV+ +A C P+ PLL+SG
Sbjct: 101 TQFYFYFFLGASEFLLLAVMSADRYLAICHPLRYPLLMSG 140
>gi|7657423 olfactory receptor, family 1, subfamily D, member 5
[Homo sapiens]
Length = 312
Score = 31.6 bits (70), Expect = 0.95
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 181 VAGLVITVIVIVG-AILFVPGEYSLKNATGLGLI-VTSTGILILLHYYVFSTAIG----L 234
V G V+ ++ I + L P + L N + L VT+T +L+++ + AI L
Sbjct: 39 VLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCL 98
Query: 235 TSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLIS-GLSILALAQLLGL 286
T + ++ + ILAV+ +A C P+H +S GL +L L+ GL
Sbjct: 99 TQLYFLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGL 151
>gi|226371762 transmembrane protein 64 isoform 2 [Homo sapiens]
Length = 328
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 191 IVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYI 250
++G +LFV G + G G IV + Y++ +G+ ++ +L+ IA++
Sbjct: 157 LLGVLLFVVGFIVVSFPCGWGYIVLNVAA-----GYLYGFVLGMGLMMVGVLIGTFIAHV 211
Query: 251 LAVVGLSLCIAACIPMHGPLLI--------SGLSILALAQL 283
+ L+ +AA I L SGL ++ALA+L
Sbjct: 212 VCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARL 252
>gi|223555958 transmembrane protein 64 isoform 1 [Homo sapiens]
Length = 380
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 191 IVGAILFVPGEYSLKNATGLGLIVTSTGILILLHYYVFSTAIGLTSFVIAILVIQVIAYI 250
++G +LFV G + G G IV + Y++ +G+ ++ +L+ IA++
Sbjct: 157 LLGVLLFVVGFIVVSFPCGWGYIVLNVAA-----GYLYGFVLGMGLMMVGVLIGTFIAHV 211
Query: 251 LAVVGLSLCIAACIPMHGPLLI--------SGLSILALAQL 283
+ L+ +AA I L SGL ++ALA+L
Sbjct: 212 VCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARL 252
>gi|52353344 olfactory receptor, family 7, subfamily A, member 10
[Homo sapiens]
Length = 309
Score = 31.2 bits (69), Expect = 1.2
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 177 IALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILL-----HYYVFSTA 231
+ ++ L+I + I + L P + L N + + + ST + +L H V + A
Sbjct: 36 LVTVLGNLLIILATISDSHLHTPMYFFLSNLSFVDICFVSTTVPKMLVNIQTHNKVITYA 95
Query: 232 IGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLIS----GLSILA 279
+T +L + + ++L V+ +A C P+H ++++ GL +LA
Sbjct: 96 GCITQMCFFLLFVGLDNFLLTVMAYDRFVAICHPLHYMVIMNPQLCGLLVLA 147
>gi|119943143 olfactory receptor, family 1, subfamily D, member 4
[Homo sapiens]
Length = 330
Score = 31.2 bits (69), Expect = 1.2
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 181 VAGLVITVIVIVG-AILFVPGEYSLKNATGLGLI-VTSTGILILLHYYVFSTAIG----L 234
V G V+ ++ I + L P + L N + L VT+T +L+++ + AI L
Sbjct: 57 VLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCL 116
Query: 235 TSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLIS-GLSILALAQLLGL 286
T + ++ + ILAV+ +A C P+H +S GL +L L+ GL
Sbjct: 117 TQLYFLVSLVTLDNLILAVMAYDRYVAICCPLHYVTAMSPGLCVLLLSLCWGL 169
>gi|53933270 olfactory receptor, family 6, subfamily C, member 6
[Homo sapiens]
Length = 314
Score = 31.2 bits (69), Expect = 1.2
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 180 LVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGI-----LILLHYYVFSTAIGL 234
L+ L+I ++ ++ L P + L+N + L +I T+ I I+ S
Sbjct: 37 LMGNLIIIILTLLDPRLKTPMYFFLRNFSFLEVIFTTVCIPRFLITIVTRDKTISYNNCA 96
Query: 235 TSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLIS 273
T +L Y+LA + +A C P+H P+++S
Sbjct: 97 TQLFFILLPGVTEFYLLAAMSYDRYVAICKPLHYPIIMS 135
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 2 WPL--VAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCF--VTNMEAQNTTEVYVK 57
WPL VA L+L G+ ++ V F D+V +PC+ V NME + ++ +
Sbjct: 9 WPLLLVALLVLSWPPPGTGDVVVQAPTQVP-GFLGDSVTLPCYLQVPNMEVTHVSQ--LT 65
Query: 58 WKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKG----DASLKMDKSDAVSHTGNYT 113
W G +++ P+ S ++E G +ASL+M V GNYT
Sbjct: 66 WARHGES--GSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM-FGLRVEDEGNYT 122
Query: 114 CEVTELTREGETIIELKYRVVS 135
C +G +++ RV++
Sbjct: 123 CLFVTFP-QGSRSVDIWLRVLA 143
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 2 WPL--VAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCF--VTNMEAQNTTEVYVK 57
WPL VA L+L G+ ++ V F D+V +PC+ V NME + ++ +
Sbjct: 9 WPLLLVALLVLSWPPPGTGDVVVQAPTQVP-GFLGDSVTLPCYLQVPNMEVTHVSQ--LT 65
Query: 58 WKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKG----DASLKMDKSDAVSHTGNYT 113
W G +++ P+ S ++E G +ASL+M V GNYT
Sbjct: 66 WARHGES--GSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM-FGLRVEDEGNYT 122
Query: 114 CEVTELTREGETIIELKYRVVS 135
C +G +++ RV++
Sbjct: 123 CLFVTFP-QGSRSVDIWLRVLA 143
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 2 WPL--VAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCF--VTNMEAQNTTEVYVK 57
WPL VA L+L G+ ++ V F D+V +PC+ V NME + ++ +
Sbjct: 9 WPLLLVALLVLSWPPPGTGDVVVQAPTQVP-GFLGDSVTLPCYLQVPNMEVTHVSQ--LT 65
Query: 58 WKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKG----DASLKMDKSDAVSHTGNYT 113
W G +++ P+ S ++E G +ASL+M V GNYT
Sbjct: 66 WARHGES--GSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM-FGLRVEDEGNYT 122
Query: 114 CEVTELTREGETIIELKYRVVS 135
C +G +++ RV++
Sbjct: 123 CLFVTFP-QGSRSVDIWLRVLA 143
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 30.0 bits (66), Expect = 2.8
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 2 WPL--VAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCF--VTNMEAQNTTEVYVK 57
WPL VA L+L G+ ++ V F D+V +PC+ V NME + ++ +
Sbjct: 9 WPLLLVALLVLSWPPPGTGDVVVQAPTQVP-GFLGDSVTLPCYLQVPNMEVTHVSQ--LT 65
Query: 58 WKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKG----DASLKMDKSDAVSHTGNYT 113
W G +++ P+ S ++E G +ASL+M V GNYT
Sbjct: 66 WARHGES--GSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM-FGLRVEDEGNYT 122
Query: 114 CEVTELTREGETIIELKYRVVS 135
C +G +++ RV++
Sbjct: 123 CLFVTFP-QGSRSVDIWLRVLA 143
>gi|32401447 solute carrier family 46, member 3 isoform a [Homo
sapiens]
Length = 461
Score = 30.0 bits (66), Expect = 2.8
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231
E + ++ L + +I I+ + E S +N T + S G L + Y +F A
Sbjct: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252
Query: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257
G F++ +L+ VI Y V+G++
Sbjct: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,966,170
Number of Sequences: 37866
Number of extensions: 369791
Number of successful extensions: 1545
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1508
Number of HSP's gapped (non-prelim): 70
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.