Guide to the Human Genome
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Name: OR6C6 Sequence: fasta or formatted (314aa) NCBI GI: 53933270
Description:

olfactory receptor, family 6, subfamily C, member 6

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         11           2
 C cysteine            3.5         11           1
 D aspartate           2.9          9           2
 E glutamate           2.5          8           1
 F phenylalanine       8.0         25           2
 G glycine             2.2          7           1
 H histidine           1.3          4           1
 I isoleucine          9.9         31           4
 K lysine              5.4         17           1
 L leucine            14.3         45           2
 M methionine          3.8         12           1
 N asparagine          3.2         10           2
 P proline             4.5         14           2
 Q glutamine           3.2         10           2
 R arginine            2.9          9           1
 S serine              7.6         24           2
 T threonine           8.6         27           2
 V valine              8.0         25           2
 W tryptophan          0.6          2           1
 Y tyrosine            4.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily C, member 6 ... 
OR6C70                0.722   olfactory receptor, family 6, subfamily C, member 70...
OR6C74                0.711   olfactory receptor, family 6, subfamily C, member 74...
OR6C75                0.699   olfactory receptor, family 6, subfamily C, member 75...
OR6C76                0.697   olfactory receptor, family 6, subfamily C, member 76...
OR6C3                 0.671   olfactory receptor, family 6, subfamily C, member 3 ...
OR6C65                0.667   olfactory receptor, family 6, subfamily C, member 65...
OR6C2                 0.656   olfactory receptor, family 6, subfamily C, member 2 ...
OR6C4                 0.642   olfactory receptor, family 6, subfamily C, member 4 ...
OR6C1                 0.630   olfactory receptor, family 6, subfamily C, member 1 ...
OR6C68                0.609   olfactory receptor, family 6, subfamily C, member 68...
OR6T1                 0.435   olfactory receptor, family 6, subfamily T, member 1 ...
OR6F1                 0.423   olfactory receptor, family 6, subfamily F, member 1 ...
OR2B2                 0.423   olfactory receptor, family 2, subfamily B, member 2 ...
OR6M1                 0.420   olfactory receptor, family 6, subfamily M, member 1 ...
OR6X1                 0.420   olfactory receptor, family 6, subfamily X, member 1 ...
OR2G3                 0.413   olfactory receptor, family 2, subfamily G, member 3 ...
OR2B6                 0.413   olfactory receptor, family 2, subfamily B, member 6 ...
OR6S1                 0.411   olfactory receptor, family 6, subfamily S, member 1 ...
OR10A7                0.410   olfactory receptor, family 10, subfamily A, member 7...
OR2D3                 0.405   olfactory receptor, family 2, subfamily D, member 3 ...
OR2J2                 0.403   olfactory receptor, family 2, subfamily J, member 2...
OR13D1                0.401   olfactory receptor, family 13, subfamily D, member 1...
OR5AR1                0.400   olfactory receptor, family 5, subfamily AR, member 1...
OR10AG1               0.400   olfactory receptor, family 10, subfamily AG, member ...
OR2B3                 0.398   olfactory receptor, family 2, subfamily B, member 3 ...
OR5B12                0.398   olfactory receptor, family 5, subfamily B, member 12...
OR5A2                 0.398   olfactory receptor, family 5, subfamily A, member 2 ...
OR2C3                 0.396   olfactory receptor, family 2, subfamily C, member 3...
OR2K2                 0.395   olfactory receptor, family 2, subfamily K, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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